FC921834
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 3.125e-22 Identity = 40/58 (68.97%), Postives = 45/58 (77.59%), Query Frame = 3 Query: 54 RE*KKMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 RE K T GPVLIH VTEKG+GYP AE AAD+ HGV KFDP TGKQFK+ + TL+YT Sbjct: 341 REVKSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKSPAKTLSYT 398 HSP 2 Score: 39.6614 bits (91), Expect = 3.125e-22 Identity = 15/21 (71.43%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVK 64 YIGPVDGHN++DL+TI + VK Sbjct: 324 YIGPVDGHNIDDLITILREVK 344
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.615e-20 Identity = 38/58 (65.52%), Postives = 44/58 (75.86%), Query Frame = 3 Query: 54 RE*KKMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 +E K T GPVLIH VTEKG+GYP AE A D+ HGVVKFDP TG+QFKT + T +YT Sbjct: 345 KEVKSTRTTGPVLIHVVTEKGRGYPYAERADDKYHGVVKFDPATGRQFKTTNKTQSYT 402 HSP 2 Score: 38.1206 bits (87), Expect = 1.615e-20 Identity = 15/21 (71.43%), Postives = 18/21 (85.71%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVK 64 YIGPVDGHN++DLV I + VK Sbjct: 328 YIGPVDGHNIDDLVAILKEVK 348
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 7.817e-20 Identity = 37/58 (63.79%), Postives = 43/58 (74.14%), Query Frame = 3 Query: 54 RE*KKMPTPGPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 +E + T GPVLIH VTEKG+GYP AE AAD+ HGV KFDP TGKQFK + T +YT Sbjct: 344 KEVRSTKTTGPVLIHVVTEKGRGYPYAERAADKYHGVAKFDPATGKQFKGSAKTQSYT 401 HSP 2 Score: 36.965 bits (84), Expect = 7.817e-20 Identity = 13/21 (61.90%), Postives = 19/21 (90.48%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVK 64 YIGPVDGHN++DL++I + V+ Sbjct: 327 YIGPVDGHNIDDLISILKEVR 347
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_AZOC5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=dxs PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.272e-17 Identity = 33/49 (67.35%), Postives = 39/49 (79.59%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GP+L+H VT+KGKGYPPAEA+AD+ HGVVKFD TG Q K KS +YT Sbjct: 274 GPILVHVVTQKGKGYPPAEASADKYHGVVKFDVVTGAQVKAKSNAPSYT 322 HSP 2 Score: 32.7278 bits (73), Expect = 4.272e-17 Identity = 10/22 (45.45%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVKE 67 Y+GP+DGHN+E L+ + + V++ Sbjct: 249 YVGPIDGHNLEHLLPVLKNVRD 270
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_MESSB (1-deoxy-D-xylulose-5-phosphate synthase OS=Mesorhizobium sp. (strain BNC1) GN=dxs PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.878e-16 Identity = 33/49 (67.35%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GPVLIH VT+KGKGYPPAEAAAD+ HGV KFD TG Q K+ + +YT Sbjct: 288 GPVLIHVVTQKGKGYPPAEAAADKYHGVAKFDVITGAQAKSPAGAPSYT 336 HSP 2 Score: 32.3426 bits (72), Expect = 5.878e-16 Identity = 11/23 (47.83%), Postives = 19/23 (82.61%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVKEN 70 +IGP+DGH++E LV + + V++N Sbjct: 263 HIGPIDGHDLEALVPVLRNVRDN 285
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_XANP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.642e-16 Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GP+L+H VT+KGKGY PAEA+AD+ HGVVKFD TG Q K KS +YT Sbjct: 274 GPILVHVVTQKGKGYAPAEASADKYHGVVKFDVVTGAQVKAKSNAPSYT 322 HSP 2 Score: 31.5722 bits (70), Expect = 7.642e-16 Identity = 9/22 (40.91%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVKE 67 Y+GP+DGHN++ L+ + + V++ Sbjct: 249 YVGPIDGHNLDHLLPVLKNVRD 270
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_BARQU (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella quintana GN=dxs PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 7.642e-16 Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GPVL+H VT KGKGY PAEA++D+ HGV FD TGKQ KT+S L YT Sbjct: 275 GPVLVHVVTHKGKGYAPAEASSDKYHGVNSFDVVTGKQIKTQSNALAYT 323 HSP 2 Score: 32.3426 bits (72), Expect = 7.642e-16 Identity = 10/22 (45.45%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVKE 67 Y+GP+DGHN++ L+ + + V+E Sbjct: 250 YVGPIDGHNLKHLLPVLKNVRE 271
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_BART1 (1-deoxy-D-xylulose-5-phosphate synthase OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=dxs PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 9.933e-16 Identity = 32/49 (65.31%), Postives = 37/49 (75.51%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GPVL+H VT KGKGYPPAEA++D+ HGV +FD TGKQ K S L YT Sbjct: 275 GPVLVHVVTHKGKGYPPAEASSDKYHGVNRFDVTTGKQVKASSNILPYT 323 HSP 2 Score: 31.187 bits (69), Expect = 9.933e-16 Identity = 10/22 (45.45%), Postives = 17/22 (77.27%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVKE 67 Y+GP+DGHN+ L+ + + V+E Sbjct: 250 YVGPIDGHNLGHLLPVLKNVRE 271
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_RHOP5 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain BisA53) GN=dxs PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.291e-15 Identity = 33/48 (68.75%), Postives = 36/48 (75.00%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTY 224 GP LIH VT+KGKGY PAEAAAD+ H VVKFD TG Q KTKS +Y Sbjct: 276 GPFLIHVVTQKGKGYAPAEAAADKYHAVVKFDIATGTQAKTKSNAPSY 323 HSP 2 Score: 33.4982 bits (75), Expect = 1.291e-15 Identity = 11/22 (50.00%), Postives = 18/22 (81.82%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVKE 67 Y+GP+DGHN++ L+ I Q V++ Sbjct: 251 YVGPIDGHNLDHLLPILQNVRD 272
BLAST of FC921834 vs. ExPASy Swiss-Prot
Match: DXS_RHIME (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhizobium meliloti GN=dxs PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.677e-15 Identity = 34/49 (69.39%), Postives = 36/49 (73.47%), Query Frame = 3 Query: 81 GPVLIHAVTEKGKGYPPAEAAADRMHGVVKFDPKTGKQFKTKSPTLTYT 227 GPVLIH VT+KGKGYPPAEAAAD+ HGV KFD TG Q K K YT Sbjct: 280 GPVLIHVVTQKGKGYPPAEAAADKYHGVNKFDVITGAQAKAKPNAPAYT 328 HSP 2 Score: 31.187 bits (69), Expect = 1.677e-15 Identity = 10/24 (41.67%), Postives = 19/24 (79.17%), Query Frame = 2 Query: 2 YIGPVDGHNVEDLVTIFQRVKENA 73 +IGP+DGH+ + L+ + + V++NA Sbjct: 255 HIGPIDGHSFDHLLPVLRNVRDNA 278 The following BLAST results are available for this feature:
BLAST of FC921834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 68
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921834 ID=FC921834; Name=FC921834; organism=Citrus sinensis; type=EST; length=229bpback to top |