CN181818
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE1_ARATH (Coatomer subunit epsilon-1 OS=Arabidopsis thaliana GN=At1g30630 PE=2 SV=1) HSP 1 Score: 251.136 bits (640), Expect = 3.451e-66 Identity = 124/155 (80.00%), Postives = 137/155 (88.39%), Query Frame = -1 Query: 173 LHALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 637 LHALNVQIF+KMH SD+AE+QLR MQQIDEDHTLTQLA+AWLNLAVGGSKIQEAYLIFQDFSEKYPMT LILNGKAVCCMHMGNF+EAE DPETLANLVVCSLH GKS+SRYLNQLKL+HP+H+LVKRA+S +++FERALQS A Sbjct: 138 LHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLANLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQSFA 292
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE1_ORYSJ (Coatomer subunit epsilon-1 OS=Oryza sativa subsp. japonica GN=COPE1 PE=2 SV=1) HSP 1 Score: 244.202 bits (622), Expect = 4.219e-64 Identity = 117/155 (75.48%), Postives = 137/155 (88.39%), Query Frame = -1 Query: 173 LHALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 637 LHALNVQIF+KMH SDYAE+QL+ MQQIDEDHTLTQLANAWL++AVGGSKI+EAYLIFQDF+EKYPMTG++LNGKAVCCMHMG+FDEAE DPETLANL+VC+LH GK +SRYL+QLKL+HPDH+LVKRA S +++FERALQ+VA Sbjct: 133 LHALNVQIFIKMHRSDYAEKQLKIMQQIDEDHTLTQLANAWLDIAVGGSKIREAYLIFQDFAEKYPMTGMVLNGKAVCCMHMGSFDEAETLLLEALNKDAKDPETLANLIVCNLHLGKPSSRYLSQLKLSHPDHVLVKRAVSAEDNFERALQAVA 287
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE2_ARATH (Coatomer subunit epsilon-2 OS=Arabidopsis thaliana GN=At2g34840 PE=2 SV=1) HSP 1 Score: 238.039 bits (606), Expect = 3.024e-62 Identity = 118/155 (76.13%), Postives = 135/155 (87.10%), Query Frame = -1 Query: 173 LHALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 637 L+ALNVQIF+KMH ++YAE+QLR MQQIDEDHTLTQLA+AWLNLAVGGSKIQEAYLIF+DFSEKYPMT LILNGKAVCCM MGNFDEAE DPETLANLVVCSLH GKS+SR+L+QLKL+HP+H+LVKR SS +++FERA+Q VA Sbjct: 139 LYALNVQIFIKMHRAEYAEKQLRVMQQIDEDHTLTQLASAWLNLAVGGSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQMGNFDEAETLLLEALNKDAKDPETLANLVVCSLHVGKSSSRHLSQLKLSHPEHILVKRVSSAEDNFERAVQLVA 293
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE2_ORYSJ (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. japonica GN=Os04g0644700 PE=3 SV=1) HSP 1 Score: 219.164 bits (557), Expect = 1.453e-56 Identity = 109/155 (70.32%), Postives = 128/155 (82.58%), Query Frame = -1 Query: 173 LHALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 637 L A+NVQI L+MH SD+AE+QLR MQQ+DEDHTLTQLANAW++L +GGSKIQEA+LIFQD SEKYP T LILNGKA+C MHMGNF++AEG D ETLANLVVCSL+ GKS SRYLNQLKL HPDHMLVKR SS ++SF+RA Q+++ Sbjct: 143 LLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDAKDAETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS 297
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE2_ORYSI (Coatomer subunit epsilon-2 OS=Oryza sativa subsp. indica GN=H0413E07.10 PE=3 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.453e-56 Identity = 109/155 (70.32%), Postives = 128/155 (82.58%), Query Frame = -1 Query: 173 LHALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKSTSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 637 L A+NVQI L+MH SD+AE+QLR MQQ+DEDHTLTQLANAW++L +GGSKIQEA+LIFQD SEKYP T LILNGKA+C MHMGNF++AEG D ETLANLVVCSL+ GKS SRYLNQLKL HPDHMLVKR SS ++SF+RA Q+++ Sbjct: 143 LLAMNVQICLQMHRSDHAEKQLRIMQQLDEDHTLTQLANAWVDLVMGGSKIQEAHLIFQDLSEKYPATCLILNGKALCLMHMGNFEDAEGLLLESLNKDAKDAETLANLVVCSLNLGKSASRYLNQLKLAHPDHMLVKRMSSAEDSFDRACQAIS 297
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE_CHICK (Coatomer subunit epsilon OS=Gallus gallus GN=COPE PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 9.487e-32 Identity = 71/156 (45.51%), Postives = 96/156 (61.54%), Query Frame = -1 Query: 173 ALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 631 A+ +QI LK+ D A ++L+ MQ+ DED TLTQLA AW+NLA+GG K+Q+AY IFQ+ ++K T L+LNG+A C M G +D+AEG PETL N VV S H GK T+RYL+QLK H +H +K + + F+R A Sbjct: 150 AMMIQILLKLDRLDLARKELKKMQEQDEDATLTQLATAWVNLAIGGEKLQDAYYIFQEMADKCSSTLLLLNGQAACYMAQGKWDDAEGVLQEALDKDSGHPETLINFVVLSQHLGKPPEVTNRYLSQLKDAHKNHPFIKEYQAKENDFDRLAMQYA 305
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE_PONAB (Coatomer subunit epsilon OS=Pongo abelii GN=COPE PE=2 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.049e-30 Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = -1 Query: 173 ALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 631 A+ VQI LK+ D A ++L+ MQ +DED TLTQLA AW++LA GG K+Q+AY IFQ+ ++K T L+LNG+A C M G ++ AEG PETL NL+V S H GK T+RYL+QLK H H +K + + F+R + A Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYA 305
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE_HUMAN (Coatomer subunit epsilon OS=Homo sapiens GN=COPE PE=1 SV=3) HSP 1 Score: 133.265 bits (334), Expect = 1.049e-30 Identity = 70/156 (44.87%), Postives = 95/156 (60.90%), Query Frame = -1 Query: 173 ALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 631 A+ VQI LK+ D A ++L+ MQ +DED TLTQLA AW++LA GG K+Q+AY IFQ+ ++K T L+LNG+A C M G ++ AEG PETL NL+V S H GK T+RYL+QLK H H +K + + F+R + A Sbjct: 150 AMTVQILLKLDRLDLARKELKRMQDLDEDATLTQLATAWVSLATGGEKLQDAYYIFQEMADKCSPTLLLLNGQAACHMAQGRWEAAEGLLQEALDKDSGYPETLVNLIVLSQHLGKPPEVTNRYLSQLKDAHRSHPFIKEYQAKENDFDRLVLQYA 305
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE_CRIGR (Coatomer subunit epsilon OS=Cricetulus griseus GN=COPE PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 1.789e-30 Identity = 73/154 (47.40%), Postives = 95/154 (61.69%), Query Frame = -1 Query: 182 ALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFER-ALQ 631 A+ +QI LK+ D A ++L+ MQ DED TLTQLA AW+NLAVGG K+QEAY IFQ+ ++K T L+LNG+A C G ++ AEG PETL NL+V S H GK T+RYL+QLK H H +K + + F+R ALQ Sbjct: 150 AMTIQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLLNGQAACHSAQGRWETAEGVLQEALDKDSGHPETLINLIVLSQHLGKPPEVTNRYLSQLKDAHRTHPFIKEYQAKENDFDRLALQ 303
BLAST of CN181818 vs. ExPASy Swiss-Prot
Match: COPE_MOUSE (Coatomer subunit epsilon OS=Mus musculus GN=Cope PE=2 SV=3) HSP 1 Score: 132.109 bits (331), Expect = 2.337e-30 Identity = 71/156 (45.51%), Postives = 93/156 (59.62%), Query Frame = -1 Query: 173 ALNVQIFLKMHSSDYAERQLRAMQQIDEDHTLTQLANAWLNLAVGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAEGXXXXXXXXXXXDPETLANLVVCSLHQGKS---TSRYLNQLKLTHPDHMLVKRASSGDESFERALQSVA 631 A+ +QI LK+ D A ++L+ MQ DED TLTQLA AW+NLAVGG K+QEAY IFQ+ ++K T L+LNG+A C G ++ AEG PETL NL+V S H GK T+RYL+QLK H H +K + + F+R A Sbjct: 150 AMTIQILLKLDRLDLARKELKKMQDQDEDATLTQLATAWVNLAVGGEKLQEAYYIFQELADKCSPTLLLLNGQAACHSAQGRWETAEGVLQEALDKDSGHPETLINLIVLSQHLGKPPEVTNRYLSQLKDAHRAHPFIKEYQAKENDFDRLAMQYA 305 The following BLAST results are available for this feature:
BLAST of CN181818 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 12
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181818 ID=CN181818; Name=CN181818; organism=Citrus sinensis; type=EST; length=637bpback to top |