CN181812

Overview
NameCN181812
Unique NameCN181812
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length668
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:149..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 323.168 bits (827), Expect = 7.757e-88
Identity = 157/222 (70.72%), Postives = 185/222 (83.33%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST-GNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            KIV D+V+ H+ NAPSLAA+ +RMHFHDCFVRGCD SVL+NST GN ER+A PN T+ G  F FI+ +K ++E  CPGIVSCADI+ L +RD++V TGGP+W VPTGRRDGR+S  +EA  NIP PT+N T LQ  FANQGLDLKDLVLLSGAHTIGVSHC+S ++RLYNFTG G QDPALDSEYAANLK+RKC + NDN T++EMDPGSRKTFDLSYY L+
Sbjct:   40 KIVQDFVSNHVSNAPSLAAALIRMHFHDCFVRGCDGSVLINSTSGNAERDATPNLTVRG--FGFIDAIKSVLEAQCPGIVSCADIIALASRDAVVFTGGPNWSVPTGRRDGRISNAAEALANIPPPTSNITNLQTLFANQGLDLKDLVLLSGAHTIGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLV 259          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 322.013 bits (824), Expect = 1.728e-87
Identity = 153/222 (68.92%), Postives = 184/222 (82.88%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNST-GNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            KI+ D++  HIHN PSLAA  +RMHFHDCFVRGCD SVL+NST GN ER+A PN TL G  F F+ER+K L+E  CP  VSCADI+ L  RD++VATGGPSW VPTGRRDGR+S ++EA NNIP PT+NFT LQR F NQGL+LKDLVLLSGAHTIGVSHC+S+++RLYNF+    QDP+LDS+YAANLKA KC++ NDN+T+LEMDPGS ++FDLSYY L+
Sbjct:   43 KIISDHIQNHIHNGPSLAAPLIRMHFHDCFVRGCDGSVLINSTSGNAERDAPPNLTLRG--FGFVERIKALLEKVCPKTVSCADIIALTARDAVVATGGPSWSVPTGRRDGRISNKTEATNNIPPPTSNFTTLQRLFKNQGLNLKDLVLLSGAHTIGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTILEMDPGSSRSFDLSYYRLV 262          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 317.005 bits (811), Expect = 5.559e-86
Identity = 156/224 (69.64%), Postives = 182/224 (81.25%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP---ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            KIV D VN+HI+NAPSLAA  +RMHFHDCFVRGCD S+L+N+T +    E+ A PN T+ G  FDFI++VK  +E  CPGIVSCADI+TL TRDSIVA GGP+W VPTGRRDGR+S  +EA NNIP P  NFT L   F NQGLD+KDLVLLSGAHTIGVSHC+S S+RL+NFTGVGDQDP+LDSEYA NLK+R+C +  DNTT +EMDPGSR TFDLSYY L+
Sbjct:   39 KIVQDVVNQHINNAPSLAAGLIRMHFHDCFVRGCDGSILINATSSNQQVEKLAPPNLTVRG--FDFIDKVKSALESKCPGIVSCADIITLATRDSIVAIGGPTWNVPTGRRDGRISNFAEAMNNIPPPFGNFTTLITLFGNQGLDVKDLVLLSGAHTIGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTKVEMDPGSRNTFDLSYYRLV 260          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 247.284 bits (630), Expect = 5.410e-65
Identity = 129/210 (61.43%), Postives = 153/210 (72.86%), Query Frame = 3
Query:   45 APSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVG---DQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYY 659
            APSLA   LRMHFHDCFVRGCD SVLL+S GN   E++A PNQTL G  F F+ERVK  VE ACPG VSCAD+L L+ RD++  + GP W VP GRRDGRVSI +E  + +P PT NFT L + FA + LDLKDLV+LS  HTIG SHC S + RLYNFTG+    D DP L+ +Y A L++ KC +  DNTTL+EMDPGS KTFDL Y+
Sbjct:   51 APSLAGPLLRMHFHDCFVRGCDGSVLLDSAGNSTAEKDATPNQTLRG--FGFVERVKAAVEKACPGTVSCADVLALMARDAVWLSKGPFWAVPLGRRDGRVSIANET-DQLPPPTANFTELTQMFAAKNLDLKDLVVLSAGHTIGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRS-KCTSLQDNTTLVEMDPGSFKTFDLGYF 256          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.205e-64
Identity = 131/222 (59.01%), Postives = 162/222 (72.97%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP-ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            K+V D +NK    AP+L A  LRM FHDCFVRGCD SVLL+   N  E++AVPN +L G  F  I+  K  +E  CPGIVSC+DIL LV RD++VA  GPSW+V TGRRDGRVS  +E   N+P+P +N T L   F ++GL+ KDLV+LSG HTIG+ HC  +++RLYNFTG GD DP+LDSEYAA L+ +KC+ P D TT LEMDPGS KTFDLSY+ L+
Sbjct:   44 KVVFDAMNK----APTLGAPLLRMFFHDCFVRGCDGSVLLDKPNNQGEKSAVPNLSLRG--FGIIDDSKAALEKVCPGIVSCSDILALVARDAMVALEGPSWEVETGRRDGRVSNINEV--NLPSPFDNITKLISDFRSKGLNEKDLVILSGGHTIGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLR-KKCK-PTDTTTALEMDPGSFKTFDLSYFTLV 255          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.286e-62
Identity = 123/221 (55.66%), Postives = 155/221 (70.14%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLN-STGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV   V + + N  ++AA  LRM FHDCFVRGC+ SVLL       E+N++PN TL G  F+ I+ VK  +E  CPGIVSC+D+L LV RD++VA  GPSW+V TGRRDG V+  +EA  N+P+P NN + L   F ++GLD KDLV+LSG HTIG  HC  +++RLYNFTG GD DP LD+EYA  L+  KC+ P D TT LEMDPGS KTFD SY+ L+
Sbjct:   47 IVKKSVFEAVKNDRTIAAPLLRMFFHDCFVRGCEGSVLLELKNKKDEKNSIPNLTLRG--FEIIDNVKAALEKECPGIVSCSDVLALVARDAMVALNGPSWEVETGRRDGLVTNITEALLNLPSPFNNISSLITQFQSKGLDKKDLVVLSGGHTIGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRG-KCK-PTDTTTALEMDPGSFKTFDESYFKLV 263          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 2.600e-59
Identity = 115/222 (51.80%), Postives = 151/222 (68.02%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNP-ERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV     +++    +LAA  LRMHFHDCFVRGCD SVLL S  N  ER+AVPN TL G  ++ ++  K  +E  CP ++SCAD+L LV RD++   GGP W VP GRRDGR+S  ++A  N+P+P  +   L+++FAN+GL+ KDLV+LSG HTIG+S C  V+SRLYNFTG GD DP+++  Y   LK RKC  P D  T L MDPGS  TFD  Y+ ++
Sbjct:   40 EIVRGVTVQYVSRQKTLAAKLLRMHFHDCFVRGCDGSVLLKSAKNDAERDAVPNLTLKG--YEVVDAAKTALERKCPNLISCADVLALVARDAVAVIGGPWWPVPLGRRDGRISKLNDALLNLPSPFADIKTLKKNFANKGLNAKDLVVLSGGHTIGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELK-RKC-PPTDFRTSLNMDPGSALTFDTHYFKVV 257          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER49_ARATH (Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 4.750e-53
Identity = 110/223 (49.33%), Postives = 141/223 (63.23%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV   V K +     +AAS LR+HFHDCFV+GCD S+LL+S+G    E+N+ PN   +   FD ++++K  +E  CPG VSCAD+LTL  RDS V TGGPSW VP GRRD R +  S++ NNIPAP N F  +   F  QGLD+ DLV LSG+HTIG S CTS   RLYN +G G  D  L+  +AANL+ R C     +  L  +D  S  +FD SY+  L
Sbjct:   44 EIVRSVVAKAVARETRMAASLLRLHFHDCFVQGCDGSLLLDSSGRVATEKNSNPNSK-SARGFDVVDQIKAELEKQCPGTVSCADVLTLAARDSSVLTGGPSWVVPLGRRDSRSASLSQSNNNIPAPNNTFQTILSKFNRQGLDITDLVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDMTLEQSFAANLRQR-CPKSGGDQILSVLDIISAASFDNSYFKNL 264          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 2.357e-52
Identity = 108/223 (48.43%), Postives = 139/223 (62.33%), Query Frame = 3
Query:    6 KIVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGN--PERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            +IV   V K +     +AAS +R+HFHDCFV+GCD S+LL+++G+   E+N+ PN   +   F+ ++ +K  +E+ CP  VSCAD LTL  RDS V TGGPSW VP GRRD   +  S + NNIPAP N F  +   F NQGLDL D+V LSG+HTIG S CTS   RLYN +G G  D  L+  YAANL+ R C     +  L E+D  S   FD SY+  L
Sbjct:   50 EIVRSVVAKAVARETRMAASLMRLHFHDCFVQGCDGSLLLDTSGSIVTEKNSNPNSR-SARGFEVVDEIKAALENECPNTVSCADALTLAARDSSVLTGGPSWMVPLGRRDSTSASLSGSNNNIPAPNNTFNTIVTRFNNQGLDLTDVVALSGSHTIGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQR-CPRSGGDQNLSELDINSAGRFDNSYFKNL 270          
BLAST of CN181812 vs. ExPASy Swiss-Prot
Match: PER2_ARAHY (Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 PE=2 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 4.446e-51
Identity = 104/220 (47.27%), Postives = 144/220 (65.45%), Query Frame = 3
Query:    9 IVLDYVNKHIHNAPSLAASFLRMHFHDCFVRGCDASVLLNSTGNPERNAVPNQTLTGATFDFIERVKRLVEDACPGIVSCADILTLVTRDSIVATGGPSWKVPTGRRDGRVSIRSEAQNNIPAPTNNFTLLQRSFANQGLDLKDLVLLSGAHTIGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLL 668
            IV   V  H+++ P+LAA  LRMHFHDCFV+GCD S+L++     E+ A  N  L G  ++ I+  K  +E ACPG+VSCADIL L  RDS+V +GG SW+VPTGRRDGRVS  S+  +N+PAP+++  + ++ FA +GL+ +DLV L G HTIG S C   S+RL+NF G    DPA+D  + +NL+A  C         + +D GS+  FD SY++ L
Sbjct:   47 IVRSTVRSHVNSDPTLAAKILRMHFHDCFVQGCDGSILISGPAT-EKTAFANLGLRG--YEIIDDAKTQLEAACPGVVSCADILALAARDSVVLSGGLSWQVPTGRRDGRVSQASDV-SNLPAPSDSVDVQKQKFAAKGLNTQDLVTLVGGHTIGTSECQFFSNRLFNFNGTAAADPAIDPSFVSNLQA-LCPQNTGAANRVALDTGSQFKFDTSYFSNL 261          
The following BLAST results are available for this feature:
BLAST of CN181812 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
PER3_ARATH7.757e-8870.72Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER30_ARATH1.728e-8768.92Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER39_ARATH5.559e-8669.64Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER1_ORYSJ5.410e-6561.43Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER27_ARATH1.205e-6459.01Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER56_ARATH4.286e-6255.66Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER1_ARATH2.600e-5951.80Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER49_ARATH4.750e-5349.33Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=... [more]
PER15_ARATH2.357e-5248.43Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER2_ARAHY4.446e-5147.27Cationic peroxidase 2 OS=Arachis hypogaea GN=PNC2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001I06_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001I06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181812 ID=CN181812; Name=CN181812; organism=Citrus sinensis; type=EST; length=668bp
GAGGAAAGATTGTGTTAGACTATGTTAACAAACACATCCACAATGCCCCC
TCATTAGCCGCATCTTTCCTCAGAATGCATTTCCATGATTGCTTTGTCAG
GGGCTGTGATGCATCCGTGCTGCTAAACTCAACAGGCAATCCTGAAAGAA
ATGCCGTTCCAAATCAAACATTGACAGGCGCAACCTTTGATTTCATCGAA
AGAGTGAAGAGACTAGTCGAAGATGCATGCCCCGGCATAGTTTCTTGTGC
AGATATTCTTACGTTAGTTACAAGAGACTCTATTGTAGCCACAGGAGGTC
CTTCCTGGAAAGTTCCAACCGGACGAAGAGACGGGCGAGTCTCCATTCGT
TCAGAAGCCCAAAACAATATCCCAGCTCCTACTAACAACTTCACCCTTCT
TCAACGAAGTTTTGCTAATCAAGGACTTGATTTGAAGGACCTGGTTCTGC
TCTCAGGTGCACACACAATCGGGGTCTCCCACTGCACTTCAGTTTCAAGC
CGGCTGTACAATTTCACAGGAGTGGGTGACCAAGACCCTGCTCTTGACAG
TGAATATGCAGCAAATCTCAAGGCAAGAAAGTGCAGAACTCCAAATGATA
ACACTACATTACTTGAAATGGACCCTGGTAGCCGCAAGACATTTGATCTT
AGCTACTACAATCTTTTG
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