CN188737

Overview
NameCN188737
Unique NameCN188737
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2795 contig Csv1_Contig2795:1102..1808. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188737 vs. ExPASy Swiss-Prot
Match: CNGT2_ARATH (Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT76C2 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.451e-42
Identity = 95/220 (43.18%), Postives = 130/220 (59.09%), Query Frame = 2
Query:   47 QQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAPVPELPPLRMKDIPVIETLYQETLHQFAAEAINQMKASSRCIWNSVQELEQDSL 706
            +++ G R+ILFPLP QG INPMLQLANIL+ +GFSIT+IHT+FN+P  S++P FTF  I DGLSETE      ++L++ +++   +PF+DCL K+L   E KE E + CLI D  W FT  V+ESLK                         KGY P+ +S + E  VPE PPL+ +D+  +   + E L  F    +     SS  I+ S +ELE+DSL
Sbjct:    3 EKRNGLRVILFPLPLQGCINPMLQLANILHVRGFSITVIHTRFNAPKASSHPLFTFLQIPDGLSETEIQ-DGVMSLLAQINLNAESPFRDCLRKVL--LESKESERVTCLIDDCGWLFTQSVSESLKLPRLVLCTFKATFFNAYPSLPLIRTKGYLPVSES-EAEDSVPEFPPLQKRDLSKVFGEFGEKLDPFLHAVVETTIRSSGLIYMSCEELEKDSL 218          
BLAST of CN188737 vs. ExPASy Swiss-Prot
Match: CNGT1_ARATH (Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis thaliana GN=UGT76C1 PE=1 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 6.097e-41
Identity = 90/225 (40.00%), Postives = 135/225 (60.00%), Query Frame = 2
Query:   44 LQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFNSPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEK--EEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAPVPELPPLRMKDIPVI--ETLYQETLHQFAAEAINQMKASSRCIWNSVQELEQDSL 706
            ++++  R++ILFPLP QG INPMLQLA ILYS+GFSITIIHT+FN+P  S++P FTF  I+DGLSE++  + D +  +++L+  C  PF++CLAKL+  + +   E+  I+C+I D+ W FT  VAES                          ++G+ P+ DS + +  VPE PPLR KD+  I   +   + L  +  + ++  K +S  I  S +EL+ DSL
Sbjct:    1 MEKRNERQVILFPLPLQGCINPMLQLAKILYSRGFSITIIHTRFNAPKSSDHPLFTFLQIRDGLSESQTQSRDLLLQLTLLNNNCQIPFRECLAKLIKPSSDSGTEDRKISCVIDDSGWVFTQSVAESFNLPRFVLCAYKFSFFLGHFLVPQIRREGFLPVPDS-EADDLVPEFPPLRKKDLSRIMGTSAQSKPLDAYLLKILDATKPASGIIVMSCKELDHDSL 224          
BLAST of CN188737 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.478e-20
Identity = 69/245 (28.16%), Postives = 112/245 (45.71%), Query Frame = 2
Query:   29 LGESHLQQKKGRRLILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFN---------SPNPSNYPHFTFCSIQDGLSETEA-STTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDSHDLEAP---------VPELPPLRMKDIP--VIETLYQETLHQFAAEAINQMKASSRCIWNSVQELEQD 700
            +G   +   +   ++  P P QGHINPM+++A +L+++GF +T ++T +N         S      P F F SI DGL ET+  +T D  AL       C APF++ L ++  NA +    P++C+++D    FT DVAE L                         +KG  P++D   L            +P +  +++KDIP  +  T   + +  FA     + K +S  I N+  +LE D
Sbjct:    1 MGSQIIHNSQKPHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRSRGSNALDGLPSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRI--NAGD-NVPPVSCIVSDGCMSFTLDVAEELGVPEVLFWTTSGCAFLAYLHFYLFIEKGLCPLKDESYLTKEYLEDTVIDFIPTMKNVKLKDIPSFIRTTNPDDVMISFALRETERAKRASAIILNTFDDLEHD 242          
BLAST of CN188737 vs. ExPASy Swiss-Prot
Match: HMNGT_SORBI (Cyanohydrin beta-glucosyltransferase OS=Sorghum bicolor GN=UGT85B1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.044e-12
Identity = 57/240 (23.75%), Postives = 97/240 (40.42%), Query Frame = 2
Query:   68 LILFPLPFQGHINPMLQLANILYSKGFSITIIHTKFN-------------SPNPSNYPHFTFCSIQDGLSETEASTTDFVALISVLHVKCAAPFQDCLAKLLSNAEEKEEEPIACLITDASWFFTHDVAESLKXXXXXXXXXXXXXXXXXXXXXXXXQKGYFPIQDS------HDLEAP---VPELPPLRMKDIPVI-------ETLYQETLHQFAAEAINQMKASSRCIWNSVQELEQD 700
            ++L P P QGH+ P++QLA +L+++G  +T ++T++N              P  ++   F    I DGLS       D   L+  L   C  PF+  L +L    E ++  P+ C++ D    F    A                            ++G  P +D+        L+ P   VP +  +R++D+P         + +   TL Q  + A      S   I N++ ELE+D
Sbjct:   13 VVLVPFPGQGHVAPLMQLARLLHARGARVTFVYTQYNYRRLLRAKGEAAVRPPATSSARFRIEVIDDGLS-LSVPQNDVGGLVDSLRKNCLHPFRALLRRLGQEVEGQDAPPVTCVVGDVVMTFAAAAAREAGIPEVQFFTASACGLLGYLHYGELVERGLVPFRDASLLADDDYLDTPLEWVPGMSHMRLRDMPTFCRTTDPDDVMVSATLQQMESAA-----GSKALILNTLYELEKD 246          
The following BLAST results are available for this feature:
BLAST of CN188737 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
CNGT2_ARATH1.451e-4243.18Cytokinin-N-glucosyltransferase 2 OS=Arabidopsis t... [more]
CNGT1_ARATH6.097e-4140.00Cytokinin-N-glucosyltransferase 1 OS=Arabidopsis t... [more]
COGT2_ARATH3.478e-2028.16Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
HMNGT_SORBI2.044e-1223.75Cyanohydrin beta-glucosyltransferase OS=Sorghum bi... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS05_0006K17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006K17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188737 ID=CN188737; Name=CN188737; organism=Citrus sinensis; type=EST; length=707bp
GCGTTAAAAGCAAGATTCAATGGAGAACCTCGGAGAGTCTCACCTGCAAC
AAAAGAAAGGAAGAAGATTGATACTCTTTCCGCTGCCTTTTCAAGGCCAC
ATAAACCCAATGCTTCAGCTTGCAAACATTCTCTATTCAAAAGGCTTTTC
AATCACCATAATCCACACCAAATTCAACTCCCCGAATCCCTCAAACTACC
CTCACTTCACCTTCTGTTCAATCCAAGACGGCTTGTCAGAAACTGAAGCC
TCTACCACGGATTTTGTGGCCCTTATTTCAGTACTGCATGTTAAGTGTGC
TGCGCCATTTCAGGATTGCTTGGCCAAGTTGCTGTCAAATGCTGAGGAGA
AGGAAGAAGAGCCTATTGCTTGCTTAATCACAGATGCTAGTTGGTTCTTC
ACTCATGATGTTGCTGAAAGCCTAAAGCTCCCCAGGATTGTGTTAAGGAG
TCTCAGTGTCTCTTCCTCTCTTGTTTATGCTGCCTTACCAGTTCTAAGCC
AAAAGGGTTACTTTCCCATACAAGATTCTCATGATTTGGAAGCCCCAGTG
CCAGAGCTTCCGCCTCTAAGAATGAAAGACATTCCTGTCATTGAAACGCT
TTATCAAGAGACACTGCATCAATTTGCAGCAGAAGCAATCAATCAGATGA
AGGCTTCCTCAAGATGCATATGGAATTCAGTTCAGGAACTTGAACAAGAT
TCTCTTG
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