CN181782
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECH1_HUMAN (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Homo sapiens GN=ECH1 PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 2.804e-43 Identity = 94/214 (43.93%), Postives = 136/214 (63.55%), Query Frame = 2 Query: 29 EESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF-GTSYELDQGVKLVAE 664 + SY+S+++ + V+++ LNRP++RNA+++ F+ E + + + ++ + A+V+SG G F +GIDL ++S D R S R I Q+ IERC KPVIA++HG CIGGGVD+VTACDIR+C++DAFF VKEVD+ + AD+GTLQRLP ++G + + ELA T R+ EA GLVSRVF LD + L AE Sbjct: 52 DHSYESLRVT--SAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGIDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIERCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAE 263
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECH1_PONAB (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Pongo abelii GN=ECH1 PE=2 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 8.159e-43 Identity = 92/214 (42.99%), Postives = 136/214 (63.55%), Query Frame = 2 Query: 29 EESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF-GTSYELDQGVKLVAE 664 + SY+S+++ + V+++ LNRP++RNA+++ F+ E + + + ++ + A+V+SG G F +G+DL ++S D R S R I Q+ IE+C KPVIA++HG CIGGGVD+VTACDIR+C++DAFF VKEVD+ + AD+GTLQRLP ++G + + ELA T R+ EA GLVSRVF LD + L AE Sbjct: 52 DHSYESLRVT--SAQKHVLHVQLNRPNKRNAMNKVFWREMVECFNKISRDADCRAVVISGAGKMFTAGVDLMDMASDILQPKGDDVARISWYLRDIITRYQETFNVIEKCPKPVIAAVHGGCIGGGVDLVTACDIRYCAQDAFFQVKEVDVGLAADVGTLQRLPKVIGNQSLVNELAFTARKMMADEALGSGLVSRVFPDKEVMLDAALALAAE 263
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECH1_MOUSE (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Mus musculus GN=Ech1 PE=2 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.100e-42 Identity = 87/198 (43.94%), Postives = 129/198 (65.15%), Query Frame = 2 Query: 29 EESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF 619 + +Y+SI++ + V+++ LNRP +RNA++R F+ E + + ++ + A+V+SG G F SGIDL ++S + D R + R I Q T IE+C KPVIA+IHG CIGGGVD+V+ACDIR+C++DAFF +KEVD+ + AD+GTLQRLP ++G + + EL + R+ EA + GLVSRVF Sbjct: 51 DHNYESIQVT--SAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASELMQPSGDDAARIAWYLRDLISKYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLVSACDIRYCTQDAFFQIKEVDMGLAADVGTLQRLPKVIGNQSLVNELTFSARKMMADEALDSGLVSRVF 246
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECH1_RAT (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Rattus norvegicus GN=Ech1 PE=1 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 6.907e-42 Identity = 88/198 (44.44%), Postives = 128/198 (64.65%), Query Frame = 2 Query: 29 EESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAM-ELALTGRRFWGLEAKELGLVSRVF 619 + +Y+SI++ + V+++ LNRP +RNA++R F+ E + + ++ + A+V+SG G F SGIDL ++S D R + R I Q T IE+C KPVIA+IHG CIGGGVD+++ACDIR+C++DAFF VKEVD+ + AD+GTLQRLP ++G + + EL T R+ EA + GLVSRVF Sbjct: 51 DHNYESIQVT--SAQKHVLHVQLNRPEKRNAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVF 246
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECH1_DICDI (Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial OS=Dictyostelium discoideum GN=ech1 PE=3 SV=1) HSP 1 Score: 145.591 bits (366), Expect = 2.379e-34 Identity = 81/210 (38.57%), Postives = 120/210 (57.14%), Query Frame = 2 Query: 5 FFTSAKQMEE-----SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVF 619 FFT+A YK +++E K ++ V L L RP Q N++ +F+ EF + + + ++L G G +G++L ++ + + + + + + IR Q ++ I +C KP IA IHGACIGGGVD++TACDIR CS DA FS++E L+I ADLGTLQR+ IVG G A ELALTG+ A+ LV+ V+ Sbjct: 6 FFTNATPSTSILKITDYKYLRLE-KNDSTFVAELVLCRPKQYNSMDDDFYNEFISIYDEIQNDSKIRCVILRGEGKGLTAGLNLGKIAPLITGDSEVSQSQNNLDLFKMIRRWQASLDKINKCSKPTIALIHGACIGGGVDMITACDIRLCSSDAKFSIRETKLSIIADLGTLQRISKIVGSGFARELALTGKDIDAKTAERFNLVNHVY 214
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: YNGF_BACSU (Putative enoyl-CoA hydratase/isomerase yngF OS=Bacillus subtilis GN=yngF PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.546e-25 Identity = 62/183 (33.88%), Postives = 96/183 (52.46%), Query Frame = 2 Query: 71 NSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDH-FCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616 N + + LNRP NALS E + ++ N N+ ++L+GTG+ FC+G DLK + + ++ + +Q ++ +PVIA+I+G+ +GGG+++ ACD+R ++ A + E LAI G QRLP ++G G A E TGRR EAKE+GLV V Sbjct: 11 NEHMALITLNRPQAANALSAEMLRNLQMIIQEIEFNSNIRCVILTGTGEKAFCAGADLKERIKLKE-----------DQVLESVSLIQRTAALLDALPQPVIAAINGSALGGGLELALACDLRIATEAAVLGLPETGLAIIPGAGGTQRLPRLIGRGKAKEFIYTGRRVTAHEAKEIGLVEHV 182
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHM_CAEEL (Probable enoyl-CoA hydratase, mitochondrial OS=Caenorhabditis elegans GN=ech-6 PE=1 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.483e-24 Identity = 72/218 (33.03%), Postives = 108/218 (49.54%), Query Frame = 2 Query: 2 AFFTSAKQMEESYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVKL 655 AF + A +M IKIE V + LNRP NAL + TE AL LD + +V AIV++G+ F +G D+K +++ + +T G F + TA+ +KPVIA+++G +GGG ++ CDI + + A F E+++ G QR G AME+ LTG EAKE G+VS++F + + VKL Sbjct: 25 AFSSKAPEM------IKIEKVGEKQNVALIKLNRPKALNALCAQLMTELADALEVLDTDKSVGAIVITGSERAFAAGADIKEMTN--NEFATTFSGSFLSNW-----------TAVSDVKKPVIAAVNGFALGGGNELAMMCDIIYAGEKARFGQPEINIGTIPGAGGTQRWARAAGKSFAMEVCLTGNHVTAQEAKEHGIVSKIFPADQVVGEAVKL 223
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHM_MOUSE (Enoyl-CoA hydratase, mitochondrial OS=Mus musculus GN=Echs1 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.447e-23 Identity = 71/206 (34.47%), Postives = 107/206 (51.94%), Query Frame = 2 Query: 35 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVK 652 +++ I E K NS V + LNRP NAL E +AL + +Q+P V AIVL+G F +G D+K + + T + +S KF D +T R +KPVIA+++G +GGG ++ CDI + + A F E+ L G QRL VG AME+ LTG R +AK+ GLVS++F +++ ++ Sbjct: 32 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEQDPAVGAIVLTGGDKAFAAGADIKEMQN------RTFQDCYSSKFLSH----WDHIT---RVKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVEKLVEEAIQ 224
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHM_RAT (Enoyl-CoA hydratase, mitochondrial OS=Rattus norvegicus GN=Echs1 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 7.181e-23 Identity = 68/206 (33.01%), Postives = 105/206 (50.97%), Query Frame = 2 Query: 35 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRVFGTSYELDQGVK 652 +++ I E K NS V + LNRP NAL E +AL + +++P V AIVL+G F +G D+K + + T + G+F + I R +KPVIA+++G +GGG ++ CDI + + A F E+ L G QRL VG AME+ LTG R +AK+ GLVS++F +++ ++ Sbjct: 32 NFQYIITEKKGKNSSVGLIQLNRPKALNALCNGLIEELNQALETFEEDPAVGAIVLTGGEKAFAAGADIKEMQNRTFQDCYS--GKFLSHWDH-----------ITRIKKPVIAAVNGYALGGGCELAMMCDIIYAGEKAQFGQPEILLGTIPGAGGTQRLTRAVGKSLAMEMVLTGDRISAQDAKQAGLVSKIFPVETLVEEAIQ 224
BLAST of CN181782 vs. ExPASy Swiss-Prot
Match: ECHA8_MYCTU (Probable enoyl-CoA hydratase echA8 OS=Mycobacterium tuberculosis GN=echA8 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.225e-22 Identity = 63/194 (32.47%), Postives = 101/194 (52.06%), Query Frame = 2 Query: 35 SYKSIKIEGKTPNSRVIYLYLNRPSQRNALSREFFTEFPKALSSLDQNPNVNAIVLSGTGDHFCSGIDLKTLSSVTDHTTSTDRGRFSEKFRRDIRFLQDAVTAIERCRKPVIASIHGACIGGGVDIVTACDIRFCSKDAFFSVKEVDLAITADLGTLQRLPAIVGYGNAMELALTGRRFWGLEAKELGLVSRV 616 +Y++I +E + RV + LNRP NAL+ + E A + LD +P++ AI+++G+ F +G D+K ++ +T F++ F D + A+ R P IA++ G +GGG ++ CD+ + A F E+ L + +G QRL +G AM+L LTGR EA+ GLVSRV Sbjct: 2 TYETILVER---DQRVGIITLNRPQALNALNSQVMNEVTSAATELDDDPDIGAIIITGSAKAFAAGADIKEMADLT----------FADAFTADFFATWGKLAAV---RTPTIAAVAGYALGGGCELAMMCDVLIAADTAKFGQPEIKLGVLPGMGGSQRLTRAIGKAKAMDLILTGRTMDAAEAERSGLVSRV 179 The following BLAST results are available for this feature:
BLAST of CN181782 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181782 ID=CN181782; Name=CN181782; organism=Citrus sinensis; type=EST; length=693bpback to top |