CN181760
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181760 vs. ExPASy Swiss-Prot
Match: RS11_EUPES (40S ribosomal protein S11 OS=Euphorbia esula GN=RPS11 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 3.917e-20 Identity = 45/48 (93.75%), Postives = 47/48 (97.92%), Query Frame = 2 Query: 2 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 145 +SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG KKAFTA+ Sbjct: 112 VSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGVKKAFTAI 159
BLAST of CN181760 vs. ExPASy Swiss-Prot
Match: RS11_SOYBN (40S ribosomal protein S11 OS=Glycine max GN=RPS11 PE=2 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 5.656e-19 Identity = 45/48 (93.75%), Postives = 45/48 (93.75%), Query Frame = 2 Query: 2 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 145 ISP FRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSS GAKKAFT M Sbjct: 112 ISPAFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSSGAKKAFTGM 159
BLAST of CN181760 vs. ExPASy Swiss-Prot
Match: RS11_MAIZE (40S ribosomal protein S11 OS=Zea mays GN=RPS11 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 4.788e-18 Identity = 42/47 (89.36%), Postives = 44/47 (93.62%), Query Frame = 2 Query: 2 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTA 142 ISPCFRVKEGDHVIIGQCRPLSKTVRFNV+KVIPAGS+ KKAFTA Sbjct: 112 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVVKVIPAGSAAAGKKAFTA 158
BLAST of CN181760 vs. ExPASy Swiss-Prot
Match: RS113_ARATH (40S ribosomal protein S11-3 OS=Arabidopsis thaliana GN=RPS11C PE=2 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 1.393e-17 Identity = 41/48 (85.42%), Postives = 44/48 (91.67%), Query Frame = 2 Query: 2 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 145 +SPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAG+S KKAFT + Sbjct: 112 VSPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV 159
BLAST of CN181760 vs. ExPASy Swiss-Prot
Match: RS111_ARATH (40S ribosomal protein S11-1 OS=Arabidopsis thaliana GN=RPS11A PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 3.103e-17 Identity = 42/49 (85.71%), Postives = 44/49 (89.80%), Query Frame = 2 Query: 2 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGG-AKKAFTAM 145 +SPCFRVKEGDH+IIGQCRPLSKTVRFNVLKVIPAGSS KKAFT M Sbjct: 112 VSPCFRVKEGDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM 160
BLAST of CN181760 vs. ExPASy Swiss-Prot
Match: RS112_ARATH (40S ribosomal protein S11-2 OS=Arabidopsis thaliana GN=RPS11B PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 9.030e-17 Identity = 41/48 (85.42%), Postives = 42/48 (87.50%), Query Frame = 2 Query: 2 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIPAGSSGGAKKAFTAM 145 +SPCFRVKEGD V IGQCRPLSKTVRFNVLKVIPAGSS KKAFT M Sbjct: 112 VSPCFRVKEGDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM 159
BLAST of CN181760 vs. ExPASy Swiss-Prot
Match: RS11_DUNTE (40S ribosomal protein S11 OS=Dunaliella tertiolecta GN=RPS11 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.926e-12 Identity = 34/47 (72.34%), Postives = 43/47 (91.49%), Query Frame = 2 Query: 2 ISPCFRVKEGDHVIIGQCRPLSKTVRFNVLKVIP-AGSSGGAKKAFT 139 +SPCFRV++GD VIIGQCRPLSKT+RFNVL+VIP AG++G KK+F+ Sbjct: 111 VSPCFRVRDGDTVIIGQCRPLSKTIRFNVLRVIPQAGATG--KKSFS 155 The following BLAST results are available for this feature:
BLAST of CN181760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181760 ID=CN181760; Name=CN181760; organism=Citrus sinensis; type=EST; length=284bpback to top |