CN181757

Overview
NameCN181757
Unique NameCN181757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length678
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5436 contig Csv1_Contig5436:252..929. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_SYNY3 (Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (strain PCC 6803) GN=lpdA PE=1 SV=3)

HSP 1 Score: 157.147 bits (396), Expect = 7.633e-38
Identity = 77/118 (65.25%), Postives = 93/118 (78.81%), Query Frame = -1
Query:  325 SIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 678
            +IPAA FTHPEIS VGLTE QA+E  EKEGF VS AKT FK N+KALAE E +G+AK++YR D GE+LG HI G+HA+DLI EA+ AIA    ++++ F VHAHPTLSEVLDE +K A
Sbjct:  356 AIPAAAFTHPEISYVGLTEAQAKELGEKEGFVVSTAKTYFKGNSKALAEKETDGIAKVVYRQDTGELLGAHIIGIHASDLIQEAAQAIADRKSVRELAFHVHAHPTLSEVLDEAYKRA 473          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH1_BACSU (Dihydrolipoyl dehydrogenase OS=Bacillus subtilis GN=pdhD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.088e-19
Identity = 52/117 (44.44%), Postives = 71/117 (60.68%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            IPA  F+ PE++ VG TE QA+E    EG ++  AK  F AN +AL+ NE +G  KLI R ++G ++G  I G  A+D+I E S AI  G   +DI   +HAHPTL E+  E  + A
Sbjct:  349 IPAVVFSEPELASVGYTEAQAKE----EGLDIVAAKFPFAANGRALSLNETDGFMKLITRKEDGLVIGAQIAGASASDMISELSLAIEGGMTAEDIAMTIHAHPTLGEITMEAAEVA 461          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH2_HALMA (Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marismortui GN=lpdA2 PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18
Identity = 50/119 (42.02%), Postives = 70/119 (58.82%), Query Frame = -1
Query:  322 SIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAAK 678
            +IPAA FT PEI+ VG+TE +A    E  GFE  + +   +AN +AL  NE EG  +++   D   +LG  I G  A++LI E    I +G R++DI   +H HPTLSE + E   AA+
Sbjct:  351 AIPAAVFTDPEIATVGMTESEA----EAAGFEPVIGQMPVRANGRALTVNEKEGFVRVVADADEEFLLGAQIVGPEASELIAELGLGIEMGARLEDIAGTIHTHPTLSEAVHEAAAAAR 465          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH1_BACST (Dihydrolipoyl dehydrogenase OS=Bacillus stearothermophilus GN=pdhD PE=1 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.015e-18
Identity = 50/118 (42.37%), Postives = 70/118 (59.32%), Query Frame = -1
Query:  325 SIPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 678
            +IPA  F+ PE + VG  E QA++    EG +V  AK  F AN +ALA N+ +G  KL+ R ++G I+G  I G +A+D+I E   AI  G   +DI   +HAHPTL E+  E  + A
Sbjct:  347 AIPAVVFSDPECASVGYFEQQAKD----EGIDVIAAKFPFAANGRALALNDTDGFLKLVVRKEDGVIIGAQIIGPNASDMIAELGLAIEAGMTAEDIALTIHAHPTLGEIAMEAAEVA 460          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH1_ARATH (Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=LPD1 PE=1 SV=2)

HSP 1 Score: 90.8929 bits (224), Expect = 6.718e-18
Identity = 49/112 (43.75%), Postives = 66/112 (58.93%), Query Frame = -1
Query:  340 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDE 675
            +P   +THPE++ VG TE    E+ +KEG    V K  F AN++A A +  EGL K++   +  +ILGVHI   +A +LIHEA  AI      +DI    HAHPT+SE L E
Sbjct:  388 VPGVVYTHPEVASVGKTE----EQLKKEGVSYRVGKFPFMANSRAKAIDNAEGLVKILADKETDKILGVHIMAPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEALKE 495          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_SCHPO (Dihydrolipoyl dehydrogenase, mitochondrial OS=Schizosaccharomyces pombe GN=dld1 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17
Identity = 46/117 (39.32%), Postives = 68/117 (58.12%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            IPA  +THPE++ VG+TE    +KA++ G +  +    F AN++A    + +GL K+I   +   +LGVH+ G  A +LI EA+ A+  G   +D+    HAHPTLSE   E   AA
Sbjct:  391 IPAVMYTHPEVAWVGITE----QKAKESGIKYRIGTFPFSANSRAKTNMDADGLVKVIVDAETDRLLGVHMIGPMAGELIGEATLALEYGASAEDVARVCHAHPTLSEATKEAMMAA 503          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_PEA (Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisum sativum GN=LPD PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 1.955e-17
Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = -1
Query:  340 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDE 675
            +P   +T+PE++ VG TE Q +E     G E  V K  F AN++A A +  EGL K+I   +  +ILGVHI   +A +LIHEA+ A+      +DI    HAHPT+SE + E
Sbjct:  382 VPGVVYTNPEVASVGKTEEQVKET----GVEYRVGKFPFMANSRAKAIDNAEGLVKIIAEKETDKILGVHIMAPNAGELIHEAAIALQYDASSEDIARVCHAHPTMSEAIKE 489          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_PIG (Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus scrofa GN=DLD PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17
Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = -1
Query:  325 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAA 675
            +P+  +THPE++ VG +E Q +E    EG E  V K  F AN++A    + +G+ K++ +     +LG HI G  A ++I+EA+ A+  G   +DI    HAHPTLSE   E   AA
Sbjct:  389 VPSVIYTHPEVAWVGKSEEQLKE----EGIEYKVGKFPFAANSRAKTNADTDGMVKILGQKSTDRVLGAHIIGPGAGEMINEAALALEYGASCEDIARVCHAHPTLSEAFREANLAA 501          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH2_ARATH (Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=LPD2 PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 7.427e-17
Identity = 46/112 (41.07%), Postives = 67/112 (59.82%), Query Frame = -1
Query:  340 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDE 675
            +P   +T+PE++ VG TE    E+ +KEG   +V K  F AN++A A +  EG+ K++   +  +ILGVHI   +A +LIHEA  AI      +DI    HAHPT+SE + E
Sbjct:  388 VPGVVYTYPEVASVGKTE----EQLKKEGVSYNVGKFPFMANSRAKAIDTAEGMVKILADKETDKILGVHIMSPNAGELIHEAVLAINYDASSEDIARVCHAHPTMSEAIKE 495          
BLAST of CN181757 vs. ExPASy Swiss-Prot
Match: DLDH_PSEFL (Dihydrolipoyl dehydrogenase OS=Pseudomonas fluorescens GN=lpd PE=1 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 9.700e-17
Identity = 49/123 (39.84%), Postives = 70/123 (56.91%), Query Frame = -1
Query:  307 IPAACFTHPEISMVGLTEPQAREKAEKEGFEVSVAKTSFKANTKALAENEGEGLAKLIYRPDNGEILGVHIFGLHAADLIHEASNAIALGTRIQDIKFAVHAHPTLSEVLDELFKAAKVKDHA 675
            IP+  +THPEI+ VG TE    +  + EG EV+V    F A+ +A+A N+  GL K+I       +LGVH+ G  AA+L+ + +  +  GT  +D+   V +HPTLSE L E   A  V  HA
Sbjct:  353 IPSVIYTHPEIAWVGKTE----QTLKAEGVEVNVGTFPFAASGRAMAANDTTGLVKVIADAKTDRVLGVHVIGPSAAELVQQGAIGMEFGTSAEDLGMMVFSHPTLSEALHE--AALAVNGHA 469          
The following BLAST results are available for this feature:
BLAST of CN181757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 67
Match NameE-valueIdentityDescription
DLDH_SYNY37.633e-3865.25Dihydrolipoyl dehydrogenase OS=Synechocystis sp. (... [more]
DLDH1_BACSU2.088e-1944.44Dihydrolipoyl dehydrogenase OS=Bacillus subtilis G... [more]
DLDH2_HALMA3.015e-1842.02Dihydrolipoyl dehydrogenase 2 OS=Haloarcula marism... [more]
DLDH1_BACST3.015e-1842.37Dihydrolipoyl dehydrogenase OS=Bacillus stearother... [more]
DLDH1_ARATH6.718e-1843.75Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Ar... [more]
DLDH_SCHPO1.146e-1739.32Dihydrolipoyl dehydrogenase, mitochondrial OS=Schi... [more]
DLDH_PEA1.955e-1741.96Dihydrolipoyl dehydrogenase, mitochondrial OS=Pisu... [more]
DLDH_PIG7.427e-1738.46Dihydrolipoyl dehydrogenase, mitochondrial OS=Sus ... [more]
DLDH2_ARATH7.427e-1741.07Dihydrolipoyl dehydrogenase 2, mitochondrial OS=Ar... [more]
DLDH_PSEFL9.700e-1739.84Dihydrolipoyl dehydrogenase OS=Pseudomonas fluores... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS04_0001G24_f Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001G24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181757 ID=CN181757; Name=CN181757; organism=Citrus sinensis; type=EST; length=678bp
TCTTATTTCAGCAATATTGTCCAGGATTGAAAGCAGAAAATAAATTTCCA
ATTAGAAACTATTATGAATATTAGTACTTCTGCAAAGCATACACAAGGCA
GAGAAACCAGGATACAAATGTCATATAAACATCTGCAAGTTTCTTCACCA
GGTTTGGTTTGCTAGGACGGTCACGGTGTTGATTAGTTCTCTCTGAGGAT
GCAAAATTCCTTGGTACTCCCTAGCACAAGCAAATTTCTTCAAAATTTAA
TATTTCCCAAGCGTCGAGATGCTTTAGACTGCAACTGGTTCACTTACTGG
ATTAGAAGCATGATCTTTAACCTTTGCTGCTTTAAACAGTTCGTCTAGAA
CTTCAGAGAGAGTTGGATGTGCATGAACCGCAAATTTTATGTCCTGAATA
CGTGTGCCTAATGCAATAGCATTAGATGCTTCATGGATAAGGTCTGCAGC
ATGCAGCCCAAAGATATGAACTCCAAGAATCTCACCGTTGTCTGGTCTGT
ATATTAACTTAGCAAGTCCCTCCCCTTCGTTTTCTGCTAAGGCCTTGGTG
TTAGCTTTGAAGCTTGTTTTCGCTACACTTACTTCAAATCCCTCCTTTTC
AGCCTTTTCCCTTGCCTGAGGCTCGGTCAATCCAACCATACTAATTTCAG
GATGTGTGAAACAAGCTGCTGGTATGCT
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