CN181744

Overview
NameCN181744
Unique NameCN181744
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length667
Libraries
Library NameType
Ruby Orange Developing Flower cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CN181744 vs. ExPASy Swiss-Prot
Match: COGT2_ARATH (Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis thaliana GN=UGT85A1 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.197e-13
Identity = 42/129 (32.56%), Postives = 69/129 (53.49%), Query Frame = 2 
Query:   26 PHVVVIPNPEQGHVIPLLELSQNLAKHGLRITFVNSEYNHNRVLESLEGKNYIG--EQIHLVSIPDGI--EPWDDRSDMRKLLEKRLQVMPGKLEGLIEEIH-GREGEKIACLIADGAAGWAIEVAEKM 397
            PHVV +P P QGH+ P++ +++ L   G  +TFVN+ YNHNR L S  G N +         SI DG+     D   D+  L E  ++        L++ I+ G     ++C+++DG   + ++VAE++
Sbjct:   12 PHVVCVPYPAQGHINPMMRVAKLLHARGFYVTFVNTVYNHNRFLRS-RGSNALDGLPSFRFESIADGLPETDMDATQDITALCESTMKNCLAPFRELLQRINAGDNVPPVSCIVSDGCMSFTLDVAEEL 139
The following BLAST results are available for this feature:
BLAST of CN181744 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
COGT2_ARATH8.197e-1332.56Cytokinin-O-glucosyltransferase 2 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS04_0001G15_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0001G15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN181744 ID=CN181744; Name=CN181744; organism=Citrus sinensis; type=EST; length=667bp
GAGGAATTAAACAAAAATGAGCAGTCCCCATGTTGTGGTAATACCGAATC
CAGAACAAGGGCATGTAATTCCTTTACTAGAGTTGTCACAAAATTTGGCC
AAGCATGGCCTGAGAATCACATTTGTGAACTCGGAGTATAATCACAATCG
GGTATTGGAATCATTAGAAGGAAAGAATTACATTGGGGAGCAAATCCATC
TGGTGTCGATCCCTGATGGAATCGAACCATGGGATGACAGGAGTGATATG
AGAAAGTTGTTAGAAAAACGTTTACAGGTTATGCCTGGAAAGCTGGAGGG
GCTCATAGAAGAGATCCATGGAAGAGAAGGTGAAAAAATAGCTTGTCTCA
TTGCAGATGGGGCAGCGGGGTGGGCTATTGAAGTCGCTGAGAAGATGAAA
CTCAGGCGGGCGGTTGTAGTGATAACCTCAGCAGCAACAGTGGCCTTGAC
ATTCAGTATCCCTAAGCTGATAGAGGATGGGGTCATTAACAGTAACGGGA
CTCCAATCAAGGAACAAATGATTCAATTGGCACCAAATATGCCTGCAATA
AGCACTGGAGAGCTATTTTGGACTCGCTTTGGTGACTTGACCATGCAAAA
AATCTTCTTTGATTTTATGGTGCAAAACATGAGAGCGACGAGAGCGGTAG
ATTTCCAGTTATGCAAC
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