CN181674
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181674 vs. ExPASy Swiss-Prot
Match: KPPR_MESCR (Phosphoribulokinase, chloroplastic OS=Mesembryanthemum crystallinum PE=2 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.230e-56 Identity = 116/162 (71.60%), Postives = 127/162 (78.40%), Query Frame = 3 Query: 147 PTKSHLGFFNNQRQLAVFYNKRXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPHLQSCHRSLGPPRAHQAPQ 632 PT SHLGF N ++QL F+ + R C VITC AGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPP+GGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRAN+FDLMYEQVKA+K+G +VEKP L P + P+ Sbjct: 9 PTTSHLGF-NQKKQL--FFCNKSAYKRVSFSSRPC-VITCLAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPRGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKEGKAVEKPIYNHVTGLLDAPELIKPPK 166 HSP 2 Score: 70.8626 bits (172), Expect = 7.130e-12 Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 565 LKSPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDAR 675 ++ PIYNHVTGLLD PELIKPPKILVIEGLHPM+D+R Sbjct: 144 VEKPIYNHVTGLLDAPELIKPPKILVIEGLHPMFDSR 180
BLAST of CN181674 vs. ExPASy Swiss-Prot
Match: KPPR_SPIOL (Phosphoribulokinase, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 6.985e-52 Identity = 109/170 (64.12%), Postives = 124/170 (72.94%), Query Frame = 3 Query: 132 CSLYS-PTKSHLGFFNNQRQLAVFYN--KRXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPHLQSCHRSLGPPRAHQAPQ 632 C++Y+ PT +HLG NQ VF+N + R VITCS QTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDD+HSLDR GRK + VTALDP+AN+FDLMYEQVKA+K+G +V+KP L PP Q P+ Sbjct: 4 CTVYTIPTTTHLGSSFNQNNKQVFFNYKRSSSSNNTLFTTRPSYVITCS--QQQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDFHSLDRNGRKVEKVTALDPKANDFDLMYEQVKALKEGKAVDKPIYNHVSGLLDPPELIQPPK 171 HSP 2 Score: 72.7886 bits (177), Expect = 1.876e-12 Identity = 32/34 (94.12%), Postives = 34/34 (100.00%), Query Frame = 1 Query: 574 PIYNHVTGLLDPPELIKPPKILVIEGLHPMYDAR 675 PIYNHV+GLLDPPELI+PPKILVIEGLHPMYDAR Sbjct: 152 PIYNHVSGLLDPPELIQPPKILVIEGLHPMYDAR 185
BLAST of CN181674 vs. ExPASy Swiss-Prot
Match: KPPR_WHEAT (Phosphoribulokinase, chloroplastic OS=Triticum aestivum PE=2 SV=1) HSP 1 Score: 197.978 bits (502), Expect = 3.833e-50 Identity = 107/172 (62.21%), Postives = 121/172 (70.35%), Query Frame = 3 Query: 117 SLNSPCSLYSPTKSHLGFFNNQRQLAVFYNKRXXXXXXXXKQRGCLVITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPHLQSCHRSLGPPRAHQAPQ 632 SL SPC+ T + GF NQ +F+ R ++C+ Q IVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDP+AN+FDLMYEQVKA+K+G ++EKP L P Q P+ Sbjct: 11 SLRSPCT----TIPNSGFRQNQ---VIFFTTRSSRRSNTRHGARTFQVSCAV--EQPIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPKANDFDLMYEQVKAIKEGKAIEKPIYNHVTGLLDPAELIQPPK 173 HSP 2 Score: 68.9366 bits (167), Expect = 2.709e-11 Identity = 30/37 (81.08%), Postives = 33/37 (89.19%), Query Frame = 1 Query: 565 LKSPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDAR 675 ++ PIYNHVTGLLDP ELI+PPKI VIEGLHPMYD R Sbjct: 151 IEKPIYNHVTGLLDPAELIQPPKIFVIEGLHPMYDER 187
BLAST of CN181674 vs. ExPASy Swiss-Prot
Match: KPPR_ARATH (Phosphoribulokinase, chloroplastic OS=Arabidopsis thaliana GN=At1g32060 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.587e-48 Identity = 96/126 (76.19%), Postives = 107/126 (84.92%), Query Frame = 3 Query: 255 VITCSAGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPHLQSCHRSLGPPRAHQAPQ 632 +ITC+ +TIVIGLAADSGCGKSTFMRRLTSVFGGAA+PPKGGNPDSNTLISDTTTVICLDDYHSLDR GRKE+ VTALDPRAN+FDLMYEQVKA+K+G++VEKP L PP Q P+ Sbjct: 43 LITCA---QETIVIGLAADSGCGKSTFMRRLTSVFGGAAKPPKGGNPDSNTLISDTTTVICLDDYHSLDRYGRKEQKVTALDPRANDFDLMYEQVKALKNGIAVEKPIYNHVTGLLDPPELIQPPK 165 HSP 2 Score: 71.633 bits (174), Expect = 4.180e-12 Identity = 31/37 (83.78%), Postives = 35/37 (94.59%), Query Frame = 1 Query: 565 LKSPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDAR 675 ++ PIYNHVTGLLDPPELI+PPKILVIEGLHPM+D R Sbjct: 143 VEKPIYNHVTGLLDPPELIQPPKILVIEGLHPMFDER 179
BLAST of CN181674 vs. ExPASy Swiss-Prot
Match: KPPR_CHLRE (Phosphoribulokinase, chloroplastic OS=Chlamydomonas reinhardtii GN=PRKA PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 5.547e-41 Identity = 81/120 (67.50%), Postives = 92/120 (76.67%), Query Frame = 3 Query: 270 AGDSQTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPHLQSCHRSLGPPRAHQAP 629 A +T+VIGLAADSGCGKSTFMRR+TS+FGG +PP GGNPDSNTLISD TTVICLDDYH LDR GRK KGVTAL P A NFDLMY QVKA+K+G SV+KP + P ++P Sbjct: 31 ADKDKTVVIGLAADSGCGKSTFMRRMTSIFGGVPKPPAGGNPDSNTLISDMTTVICLDDYHCLDRNGRKVKGVTALAPEAQNFDLMYNQVKALKEGKSVDKPIYNHVSGLIDAPEKIESP 150
BLAST of CN181674 vs. ExPASy Swiss-Prot
Match: KPPR_SYNY3 (Phosphoribulokinase OS=Synechocystis sp. (strain PCC 6803) GN=prk PE=2 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 5.041e-26 Identity = 61/110 (55.45%), Postives = 71/110 (64.55%), Query Frame = 3 Query: 282 QTIVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVKAMKDGVSVEKPHLQSCHRSLGPP 611 + ++IG+A DSGCGKSTF+RRLT +FG + TVICLDDYHSLDR GRK GVTALDPRANNFDLMYEQ+K +K G S+ KP L PP Sbjct: 7 RVVLIGVAGDSGCGKSTFLRRLTDLFG-----------------EEFMTVICLDDYHSLDRQGRKAAGVTALDPRANNFDLMYEQIKTLKSGQSIMKPIYNHETGLLDPP 99
BLAST of CN181674 vs. ExPASy Swiss-Prot
Match: KPPR_VITSX (Phosphoribulokinase, chloroplastic (Fragments) OS=Vitis sp. PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.598e-26 Identity = 58/66 (87.88%), Postives = 60/66 (90.91%), Query Frame = 3 Query: 345 LTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANNFDLMYEQVK 542 LTSVFGGAAEPP+GGNPDSNTLISDTTTVICLDDYHSLDR GVTALDPRAN+FDLMYEQVK Sbjct: 1 LTSVFGGAAEPPRGGNPDSNTLISDTTTVICLDDYHSLDR------GVTALDPRANDFDLMYEQVK 60 The following BLAST results are available for this feature:
BLAST of CN181674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181674 ID=CN181674; Name=CN181674; organism=Citrus sinensis; type=EST; length=675bpback to top |