CN188669

Overview
NameCN188669
Unique NameCN188669
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length707
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: PTRB_MORLA (Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 9.712e-47
Identity = 86/136 (63.24%), Postives = 107/136 (78.68%), Query Frame = -1
Query:  297 NMRPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDANILLFKCELGAGHFSKSGRFERFREAAFTYTFLMRALSM 704
            NM  +LFK  V AVPFVDV+TTMLD +IP TT EW+EWGDPRK+E YFYMKSYSP DNV+A++YPH+ +T G+NDPRV Y EPAK+VA+LR +KTD N L+ K  +GAGHF KSGRF   +EAA +Y F++  L +
Sbjct:  545 NMAGELFKVIVPAVPFVDVVTTMLDTSIPLTTLEWDEWGDPRKQEDYFYMKSYSPYDNVEAKDYPHMYITTGINDPRVGYFEPAKWVARLRAVKTDNNTLVMKTNMGAGHFGKSGRFNHLKEAAESYAFILDKLGV 680          
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: PTRB_ECOLI (Protease 2 OS=Escherichia coli (strain K12) GN=ptrB PE=1 SV=2)

HSP 1 Score: 169.088 bits (427), Expect = 2.096e-41
Identity = 78/132 (59.09%), Postives = 101/132 (76.52%), Query Frame = -1
Query:  312 LNMRPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFYFYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDANILLFKCELGAGHFSKSGRFERFREAAFTYTFLM 707
            +N RP+LF G +A VPFVDV+TTMLD +IP TT E+EEWG+P+  ++Y YMKSYSP DNV AQ YPH+LVT GL+D +V Y EPAK+VAKLRE+KTD ++LL   ++ +GH  KSGRF+ +   A  Y FL+
Sbjct:  542 INQRPELFHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLLLLCTDMDSGHGGKSGRFKSYEGVAMEYAFLV 673          
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: Y4SO_RHISN (Uncharacterized peptidase y4sO OS=Rhizobium sp. (strain NGR234) GN=NGR_a01580 PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.110e-17
Identity = 48/135 (35.56%), Postives = 75/135 (55.56%), Query Frame = -1
Query:  303 MRPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFYFYMKSYSPVDNVKA-QNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDAN-ILLFKCELGAGHFSKSGRFERFREAAFTYTFLMRAL 701
            +RPDLF+  +A VP  D++ T LD T+P+   E  E+GDP     Y Y++SY P  N+   + YP   + A L+D +V+Y +PA++VA+ R    D +  L+F+  +  GH   S       EAAF   +++  L
Sbjct:  566 LRPDLFRAVLAEVPLADIIDTELDFTLPYALRETAEYGDPHLANDYQYLRSYDPYYNLTPDRRYPPTYIDAALHDSQVLYYQPARYVAQRRSKAVDRDPDLIFRTRMIGGHMGVSHGPGVAEEAAFRMAWILHRL 700          
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: Y4QF_RHISN (Uncharacterized peptidase y4qF OS=Rhizobium sp. (strain NGR234) GN=NGR_a01920 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.701e-17
Identity = 49/134 (36.57%), Postives = 77/134 (57.46%), Query Frame = -1
Query:  303 RPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFYFYMKSYSPVDNVKAQ-NYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTDAN-ILLFKCELGAGHFSKSGRFERFREAAFTYTFLMRAL 698
            RP+LF+  VA VP  D++ T LD T+P+T  E  E+GDP+    Y Y++SY P  N+  + + P   V A L+D +V+Y +PA++VA+ R   TD +  L+F+  +  GH   S       +AAF   +++  L
Sbjct:  598 RPNLFRAVVAEVPLADIIDTQLDSTMPYTLKETAEYGDPQDAYEYRYLRSYDPYYNLSPERSLPPTYVDAALDDGQVIYYQPARYVAQRRSCATDRDPDLVFRIRMVGGHSGPSHGPGIAEQAAFRMAWVLDQL 731          
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: PPCEL_XENLA (Prolyl endopeptidase-like OS=Xenopus laevis GN=prepl PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 41/97 (42.27%), Postives = 57/97 (58.76%), Query Frame = -1
Query:  417 NMRPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFYF-YMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLREMKTD 704
            N  P LF+  V   PF+DVL TM++ ++P T  E EEWG+P  +E Y  Y+KSY P  N+  QNYP + +TA  ND RV       ++ +LR+   D
Sbjct:  549 NSAPRLFRAVVLEAPFLDVLNTMMNVSLPLTIEEQEEWGNPLSDEKYHRYIKSYCPYQNITPQNYPCVRITAYENDQRVPIQGLLGYITRLRKAARD 645          
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: PPCEL_MOUSE (Prolyl endopeptidase-like OS=Mus musculus GN=Prepl PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.512e-15
Identity = 40/93 (43.01%), Postives = 55/93 (59.14%), Query Frame = -1
Query:  429 NMRPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFY-FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 704
            N +P+L +      PF+DVL TMLD T+P T  E EEWG+P  +E +  Y+K Y P  N+K Q+YP + +TA  ND RV       +  KL+E
Sbjct:  568 NSKPELLRAVTLEAPFLDVLNTMLDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPCQNIKPQHYPSVHITAYENDERVPLKGIVNYTEKLKE 660          
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: PPCEL_PONAB (Prolyl endopeptidase-like OS=Pongo abelii GN=PREPL PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 3.369e-15
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = -1
Query:  429 NMRPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFY-FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 704
            N  P+L +      PF+DVL TM+D T+P T  E EEWG+P  +E +  Y+K Y P  N+K Q+YP I +TA  ND RV       +  KL+E
Sbjct:  570 NSNPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKHYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKE 662          
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: PPCEL_RAT (Prolyl endopeptidase-like OS=Rattus norvegicus GN=Prepl PE=2 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = -1
Query:  429 NMRPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFY-FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 704
            N +P+L +      PF+DVL TM+D T+P T  E EEWG+P  +E +  Y+K Y P  N+K Q+YP + +TA  ND RV       +  KL+E
Sbjct:  569 NSKPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPCQNMKPQHYPSVHITAYENDERVPLKGIVNYTEKLKE 661          
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: PPCEL_MACFA (Prolyl endopeptidase-like OS=Macaca fascicularis GN=PREPL PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 39/93 (41.94%), Postives = 54/93 (58.06%), Query Frame = -1
Query:  429 NMRPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFY-FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 704
            N  P+L +      PF+DVL TM+D T+P T  E EEWG+P  +E +  Y+K Y P  N+K Q+YP + +TA  ND RV       +  KL+E
Sbjct:  570 NCNPELLRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSVHITAYENDERVPLKGIVSYTEKLKE 662          
BLAST of CN188669 vs. ExPASy Swiss-Prot
Match: PPCEL_HUMAN (Prolyl endopeptidase-like OS=Homo sapiens GN=PREPL PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.400e-15
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = -1
Query:  429 NMRPDLFKGAVAAVPFVDVLTTMLDPTIPFTTAEWEEWGDPRKEEFY-FYMKSYSPVDNVKAQNYPHILVTAGLNDPRVMYSEPAKFVAKLRE 704
            N  P+L +      PF+DVL TM+D T+P T  E EEWG+P  +E +  Y+K Y P  N+K Q+YP I +TA  ND RV       +  KL+E
Sbjct:  570 NSNPELVRAVTLEAPFLDVLNTMMDTTLPLTLEELEEWGNPSSDEKHKNYIKRYCPYQNIKPQHYPSIHITAYENDERVPLKGIVSYTEKLKE 662          
The following BLAST results are available for this feature:
BLAST of CN188669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
PTRB_MORLA9.712e-4763.24Protease 2 OS=Moraxella lacunata GN=ptrB PE=3 SV=1[more]
PTRB_ECOLI2.096e-4159.09Protease 2 OS=Escherichia coli (strain K12) GN=ptr... [more]
Y4SO_RHISN2.110e-1735.56Uncharacterized peptidase y4sO OS=Rhizobium sp. (s... [more]
Y4QF_RHISN4.701e-1736.57Uncharacterized peptidase y4qF OS=Rhizobium sp. (s... [more]
PPCEL_XENLA1.512e-1542.27Prolyl endopeptidase-like OS=Xenopus laevis GN=pre... [more]
PPCEL_MOUSE1.512e-1543.01Prolyl endopeptidase-like OS=Mus musculus GN=Prepl... [more]
PPCEL_PONAB3.369e-1543.01Prolyl endopeptidase-like OS=Pongo abelii GN=PREPL... [more]
PPCEL_RAT4.400e-1541.94Prolyl endopeptidase-like OS=Rattus norvegicus GN=... [more]
PPCEL_MACFA4.400e-1541.94Prolyl endopeptidase-like OS=Macaca fascicularis G... [more]
PPCEL_HUMAN4.400e-1543.01Prolyl endopeptidase-like OS=Homo sapiens GN=PREPL... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006I14_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006I14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188669 ID=CN188669; Name=CN188669; organism=Citrus sinensis; type=EST; length=707bp
TTTTTTTTTTTTTTTTTAATAAAAGACTTTGCATCTCTCATTAGCGCATC
GTGACAATGCCTTATCGGGCGTTGCAAGTAGTCCTCAGCAATGAAAATTA
ATGAGTACCTTTCTAATTTTTTTTTTTTTGGCGGGGAAAAGTCCAAGAAA
TAAATCAGGAGTAATATTTGTATCCCCAGAAATGGCTCAACTGTAAGCCG
GGTTGCTGATCTTGCGCAACAGGGATTCGTACCGCGGGAAGCATCTCCTA
ATGGGCATTTGGTTCCTCAGCTCTGCTCAAAACCAACACTGGGAAGCATA
CTCAGGGCCCTCATCAAAAAAGTATATGTAAAAGCAGCTTCTCGAAACCT
CTCAAATCTCCCTGACTTTGAAAAATGTCCAGCACCAAGTTCACATTTAA
ACAATAGTATATTGGCATCAGTTTTCATTTCCCTCAGTTTTGCCACAAAC
TTAGCAGGTTCCGAGTACATAACACGTGGATCATTCAAGCCAGCCGTGAC
AAGAATGTGAGGATAATTTTGAGCCTTAACATTATCAACAGGCGAATATG
ACTTCATGTAAAAGTAAAATTCTTCCTTCCGGGGGTCACCCCATTCCTCC
CACTCAGCAGTTGTAAAAGGAATAGTTGGATCCAGCATTGTGGTCAGGAC
ATCTACAAATGGGACTGCTGCAACTGCACCCTTGAACAAATCAGGCCTCA
TGTTAAG
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