CN181652
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181652 vs. ExPASy Swiss-Prot
Match: MYG1_MOUSE (UPF0160 protein MYG1, mitochondrial OS=Mus musculus GN=Myg1 PE=2 SV=1) HSP 1 Score: 149.058 bits (375), Expect = 1.773e-35 Identity = 74/162 (45.68%), Postives = 103/162 (63.58%), Query Frame = 1 Query: 151 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDCYDHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDW 621 R+GTHNG+FHCDEAL C ++RL ++ NA+IVR+RDP+ Y+P + YDHHQ+ F E G + TKLSSAGLVY HFG++L+A+ L E V ++ +Y+NF+E +DA+DNGI+Q+ + PRY T LS+RV +LN W Sbjct: 45 RIGTHNGTFHCDEALACALLRLLPEYANAEIVRTRDPEKLASCDIVVDVGGEYNPQSHRYDHHQRTFTETMSSLCPGKPWQTKLSSAGLVYLHFGRKLLAQLLGTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQW-AEGEPRYAMTTTLSARVARLNPTW 205
BLAST of CN181652 vs. ExPASy Swiss-Prot
Match: MYG1_BOVIN (UPF0160 protein MYG1, mitochondrial OS=Bos taurus PE=2 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 3.950e-35 Identity = 74/162 (45.68%), Postives = 102/162 (62.96%), Query Frame = 1 Query: 151 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDCYDHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDW 621 R+GTHNG+FHCDEAL C ++RL ++ A+IVR+RDP+ YDP YDHHQ+ F E G + TKLSSAGL+Y HFG +L+A+ L E V L+ +Y+NF+E +DA+DNGI+Q++ + PRY+ T LS+RV +LN W Sbjct: 46 RIGTHNGTFHCDEALACALLRLLPEYREAEIVRTRDPEKLAACDIVVDVGGEYDPQRHRYDHHQRSFTETMSSLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGTSEEDGMVGTLYDKMYENFVEEVDAVDNGISQWE-EGEPRYLLTTTLSARVARLNPTW 206
BLAST of CN181652 vs. ExPASy Swiss-Prot
Match: MYG1_RAT (UPF0160 protein MYG1, mitochondrial OS=Rattus norvegicus GN=Myg1 PE=1 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 8.801e-35 Identity = 74/162 (45.68%), Postives = 101/162 (62.35%), Query Frame = 1 Query: 151 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDCYDHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDW 621 R+GTHNG+FHCDEAL C ++RL ++ NA+IVR+RDP+ Y+P YDHHQ+ F E G + TKLSSAGLVY HFG +L+A+ L E V ++ +Y+NF+E +DA+DNGI+Q+ + PRY T LS+RV +LN W Sbjct: 46 RIGTHNGTFHCDEALACALLRLLPEYRNAEIVRTRDPEKLALCDIVVDVGGEYNPQRHRYDHHQRTFTETMSSLCPGKPWQTKLSSAGLVYLHFGHKLLAQLLGTSEEDSVVDTIYDKMYENFVEEVDAVDNGISQW-AEGEPRYALTTTLSARVSRLNPTW 206
BLAST of CN181652 vs. ExPASy Swiss-Prot
Match: MYG1_HUMAN (UPF0160 protein MYG1, mitochondrial OS=Homo sapiens GN=C12orf10 PE=1 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.149e-34 Identity = 74/162 (45.68%), Postives = 101/162 (62.35%), Query Frame = 1 Query: 151 RVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDCYDHHQKGFEEVF-----GHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDW 621 R+GTHNG+FHCDEAL C ++RL ++ +A+IVR+RDP+ YDP YDHHQ+ F E G + TKLSSAGL+Y HFG +L+A+ L E V L+ +Y+NF+E +DA+DNGI+Q+ + PRY T LS+RV +LN W Sbjct: 46 RIGTHNGTFHCDEALACALLRLLPEYRDAEIVRTRDPEKLASCDIVVDVGGEYDPRRHRYDHHQRSFTETMSSLSPGKPWQTKLSSAGLIYLHFGHKLLAQLLGPSEEDSMVGTLYDKMYENFVEEVDAVDNGISQW-AEGEPRYALTTTLSARVARLNPTW 206
BLAST of CN181652 vs. ExPASy Swiss-Prot
Match: YK4P_CAEEL (UPF0160 protein C27H6.8 OS=Caenorhabditis elegans GN=C27H6.8 PE=2 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 3.826e-30 Identity = 68/160 (42.50%), Postives = 94/160 (58.75%), Query Frame = 1 Query: 154 VGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDCYDHHQKGFEEVFGH----GFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDW 621 +GTH+G FHCDEA CFM++ +F + I+R+RD +D S YDHHQ+GF + F TKLSSAGLVY H+G+E+I + L + + + +Y+ F+E+IDAIDNGI+QY D PRY ++ NLSSR G+ N W Sbjct: 5 IGTHSGKFHCDEAFACFMLKQLPQFKDHSILRTRDAAQLEKCDIIVDVGGIFDHSKQRYDHHQRGFTDTMRTLEKLNFDTKLSSAGLVYAHYGREVINQILGGNVSSSMIDLFYHRLYEQFVESIDAIDNGISQY--DGVPRYHSSGNLSSRTGQFNSHW 162
BLAST of CN181652 vs. ExPASy Swiss-Prot
Match: U160_DICDI (UPF0160 protein OS=Dictyostelium discoideum GN=DDB_G0267768 PE=3 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 5.525e-29 Identity = 58/154 (37.66%), Postives = 95/154 (61.69%), Query Frame = 1 Query: 160 THNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDW 621 TH+GSFH DEAL C++++L + +++I+RSRD Y+ +DHHQ GF E F KLSSAGL+YKH+GK++I + L+ ++ ++ L+ +Y + ++ +D +DNG+ +Y +D PRY + +++S+RVG LN W Sbjct: 8 THSGSFHADEALACYLLKLLPTYKDSKIIRSRDKSVIEKSTVAVDVGAVYNFEKLRFDHHQSGFTETFDDKHDIKLSSAGLIYKHYGKDIIKQRLDTNDSITEL--LYQKLYDSMIQELDGVDNGVERYPSDIKPRYQSGSSISARVGHLNQGW 159
BLAST of CN181652 vs. ExPASy Swiss-Prot
Match: YEY6_YEAST (UPF0160 protein YER156C OS=Saccharomyces cerevisiae GN=YER156C PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 4.677e-28 Identity = 65/163 (39.88%), Postives = 100/163 (61.35%), Query Frame = 1 Query: 148 KRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQY----DTDKPPRYVNNT-NLSSRVGKLNLDW 621 K++ TH+GSFH DE+L +M+RL +F +A++VRSR+PK YD +DHHQ+GF E F + TKLSSAGL++KH+G+++I LN D+ L+ VYK F+EA+DA DNGI++Y D++ P + +N ++ + +N +W Sbjct: 15 KQICTHSGSFHADESLAVYMLRLLPEFKDAKLVRSRNPKDWEASDILVDVGAQYDGVK-FFDHHQRGFFETFNEKYKTKLSSAGLIFKHYGRDIIKTILNNKVSSSDLDLLYDKVYKQFVEALDANDNGISKYTIPKDSNLEPNFRDNAISIPGIISGMNPNW 176
BLAST of CN181652 vs. ExPASy Swiss-Prot
Match: YIW4_SCHPO (UPF0160 protein C694.04c OS=Schizosaccharomyces pombe GN=SPAC694.04c PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.754e-27 Identity = 65/162 (40.12%), Postives = 93/162 (57.41%), Query Frame = 1 Query: 145 LKRVGTHNGSFHCDEALGCFMIRLTDKFFNAQIVRSRDPKXXXXXXXXXXXXXXYDPSNDCYDHHQKGFEEVFGHGFSTKLSSAGLVYKHFGKELI---AKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNGINQYDTDKPPRYVNNTNLSSRVGKLNLDW 621 L ++ TH+G+FH DEAL +M+R D+F AQIVRSRDP+ YD +DHHQ+ F + F +ST+LSSAGL+YKHFG+E+I +L ++E D+ L+ VY++F+E +DA DNGI+ Y P + +L V W Sbjct: 4 LVKIATHSGTFHADEALAVYMLRRLDRFSGAQIVRSRDPQVLDSCDIIVDVGGKYD-GIKYFDHHQREFNDTFSPKYSTRLSSAGLIYKHFGREVIHAVLPQLKINE--QDLETLYEKVYQSFVEGLDANDNGISAYPAGLKPSFKAAMSLPEMVSSFLPAW 162 The following BLAST results are available for this feature:
BLAST of CN181652 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN181652 ID=CN181652; Name=CN181652; organism=Citrus sinensis; type=EST; length=624bpback to top |