CN181632
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_ARATH (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Arabidopsis thaliana GN=CLA1 PE=1 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 6.495e-68 Identity = 123/170 (72.35%), Postives = 141/170 (82.94%), Query Frame = -2 Query: 243 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 752 IDDRPSCFR+PRGNGIG LPP NKG P+EIGKGRIL EG+RVA+LGYGS VQ C+ AA ML+ + ++VTVADARFCKPLD LIR LA HE+LITVEEGS+GGFGSHV FL L G+LDG LK R MVLPDRYIDHG+PADQL E+GL HI+AT L+L+G P+EAL Sbjct: 547 IDDRPSCFRYPRGNGIGVALPPGNKGVPIEIGKGRILKEGERVALLGYGSAVQSCLGAAVMLEERGLNVTVADARFCKPLDRALIRSLAKSHEVLITVEEGSIGGFGSHVVQFLALDGLLDGKLKWRPMVLPDRYIDHGAPADQLAEAGLMPSHIAATALNLIGAPREAL 716
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_ORYSJ (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica GN=CLA1 PE=2 SV=2) HSP 1 Score: 254.988 bits (650), Expect = 3.224e-67 Identity = 118/172 (68.60%), Postives = 145/172 (84.30%), Query Frame = -2 Query: 237 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEALLI 752 IDDRPSCFR+PRGNGIG LPPN KG PLE+GKGR+L+EG+RVA+LGYGS VQ C+ AA++++ + VTVADARFCKPLD LIR+LA+ HE+L+TVEEGS+GGFGSHV F+ L G+LDG LK R +VLPDRYIDHGSPADQL E+GL+ HI+ATV ++LG+ +EAL I Sbjct: 543 IDDRPSCFRYPRGNGIGVPLPPNYKGVPLEVGKGRVLLEGERVALLGYGSAVQYCLAAASLVERHGLKVTVADARFCKPLDQTLIRRLASSHEVLLTVEEGSIGGFGSHVAQFMALDGLLDGKLKWRPLVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNVLGQAREALAI 714
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_CAPAN (Probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic OS=Capsicum annuum GN=TKT2 PE=2 SV=1) HSP 1 Score: 251.906 bits (642), Expect = 2.729e-66 Identity = 118/170 (69.41%), Postives = 143/170 (84.12%), Query Frame = -2 Query: 243 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 752 IDDRPSCFR+PRGNGIG LP NKG PLE+GKGRIL+EG+RVA+LGYGS VQ C+ AA++L+S+ + VTVADARFCKPLD LIR LA HE+L+TVE+GS+GGFGSHV F+ L G+LDG LK R +VLPDRYIDHGSPADQL E+GL+ HI+ATV ++LG+ +EAL Sbjct: 546 IDDRPSCFRYPRGNGIGVELPAGNKGIPLEVGKGRILVEGERVALLGYGSAVQNCLAAASVLESRGLQVTVADARFCKPLDRALIRSLAKSHEVLVTVEKGSIGGFGSHVVQFMALDGLLDGKLKWRPIVLPDRYIDHGSPADQLAEAGLTPSHIAATVFNILGQTREAL 715
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_HYPNA (1-deoxy-D-xylulose-5-phosphate synthase OS=Hyphomonas neptunium (strain ATCC 15444) GN=dxs PE=3 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45 Identity = 91/165 (55.15%), Postives = 118/165 (71.52%), Query Frame = -2 Query: 258 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 752 IDDRPS R+PRG G+G V+P K PLEIGKGR++ EG +AIL YG+ +Q+ + AA ML +Q +S TVADARF KPLD +LI +LA EHE+L+T+EEGS GGFGS V L G LD LK+R M LPD + DH +PA +++GL++RHI+A + LGR Sbjct: 466 IDDRPSAVRYPRGEGVGVVIPDLLK--PLEIGKGRVVREGTSIAILSYGTRLQEALKAAEMLAAQGLSATVADARFAKPLDNELIERLAREHEVLVTIEEGSRGGFGSFVLEHLANCGGLDAGLKVRVMTLPDVFQDHDTPAAMYDQAGLTARHIAARAIEALGR 628
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_RHOCS (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=dxs PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.542e-44 Identity = 90/163 (55.21%), Postives = 118/163 (72.39%), Query Frame = -2 Query: 261 DDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 749 D P R+PRG G+G +P +G LEIGKGRI+ EG +VAIL G+ +++ +LAA L ++ +S TVADARF KP+D LIR+LA +HE+LITVEEGS+GGFGS+V HFL SG+LD LK+R MVLPD + D +PA Q +E+GL++RHI T L LG Sbjct: 470 DHGPIAVRYPRGEGVGLEMP--ERGQVLEIGKGRIVKEGTKVAILSLGTRLKEALLAAEDLNARGLSTTVADARFAKPIDEALIRRLAQDHEVLITVEEGSIGGFGSYVLHFLAQSGLLDQGLKVRPMVLPDIFQDQDAPAKQYDEAGLNARHIVETALKALG 630
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_MAGSA (1-deoxy-D-xylulose-5-phosphate synthase OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=dxs PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.116e-43 Identity = 89/170 (52.35%), Postives = 122/170 (71.76%), Query Frame = -2 Query: 243 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEAL 752 IDDRPS FR+PRG G+G L + +G+ + IGKGR++ EG+RVAIL G+ + + + AA+ L ++ ++ TV DARF KPLD +LI +LA EHE+LITVEEGSVGGFGSHV H L G LD LK+R + LPD +++H +PA Q E+ GL++ I ATVL+ LG + + Sbjct: 475 IDDRPSAFRYPRGEGVGIEL--SERGSVMPIGKGRVVREGNRVAILSLGTRLAEALKAADELAARGLAPTVVDARFMKPLDEELILRLAREHEVLITVEEGSVGGFGSHVLHLLASKGALDNGLKVRPLALPDVFVEHDAPAIQYEKIGLNASGIVATVLATLGEARSVV 642
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS1_JANSC (1-deoxy-D-xylulose-5-phosphate synthase 1 OS=Jannaschia sp. (strain CCS1) GN=dxs1 PE=3 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.116e-43 Identity = 91/164 (55.49%), Postives = 116/164 (70.73%), Query Frame = -2 Query: 261 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLG 752 IDDRPS FRFPRG G+G +P ++GT LEIGKGR++ EG+RVAIL +G+ +++ AA L + I+ T+ADARF KPLD LI QLA HE LITVEEG+VGGFGSHV H L + + D +K RSMVLPD +ID SP D +G+++ I A VL+ LG Sbjct: 470 IDDRPSAFRFPRGEGMGVDMP--DRGTALEIGKGRMISEGNRVAILNFGTRLKEVQEAAETLSQRGITPTIADARFAKPLDEALILQLARHHEALITVEEGAVGGFGSHVAHLLAENAVFDTGIKYRSMVLPDIFIDQASPKDMYAVAGMNAEDIVAKVLTTLG 631
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_MARMM (1-deoxy-D-xylulose-5-phosphate synthase OS=Maricaulis maris (strain MCS10) GN=dxs PE=3 SV=1) HSP 1 Score: 176.022 bits (445), Expect = 1.903e-43 Identity = 90/169 (53.25%), Postives = 118/169 (69.82%), Query Frame = -2 Query: 246 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 752 IDD PS FR+PRGNG G +P + PLEIGKGRI+ EG R+AIL G+ +++ + AA+ L +Q S TVADARF KPLD DLI +LA EHE+LITVEEG+VGGFG+ V H L G LD L++R++ LPD + D +P D E +GL++RHI+A L +G+ A Sbjct: 466 IDDGPSAFRYPRGNGTGIEIPDQIE--PLEIGKGRIVREGSRIAILSLGTRLEESLKAADALAAQGFSTTVADARFAKPLDEDLILRLAREHEVLITVEEGAVGGFGAFVLHMLADKGALDRGLRIRTLTLPDVFQDQEAPFDMYETAGLNARHIAAKALEAMGKDDAA 632
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_RHOP2 (1-deoxy-D-xylulose-5-phosphate synthase OS=Rhodopseudomonas palustris (strain HaA2) GN=dxs PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.485e-43 Identity = 88/169 (52.07%), Postives = 119/169 (70.41%), Query Frame = -2 Query: 246 IDDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGRPKEA 752 I+DRPS R+PRG G G +P + G PLEIGKGR++ +G++VA+L +G+ + +C AA L + +S TVADARF KPLD DL+ +LANEHEILIT+EEGS+GGFGSHV L+ G LDG +K+R+MVLPD ++DH +PA +GL ++ I V LG+ A Sbjct: 466 INDRPSAVRYPRGEGRGVEMP--DVGVPLEIGKGRVIRQGNKVALLSFGTRLAECEKAAEELATLGLSTTVADARFMKPLDVDLVIKLANEHEILITIEEGSIGGFGSHVMQTLSDHGKLDGEVKMRAMVLPDVFLDHDTPAAMYAAAGLDAKAIVKKVFEALGKEHAA 632
BLAST of CN181632 vs. ExPASy Swiss-Prot
Match: DXS_BRUSU (1-deoxy-D-xylulose-5-phosphate synthase OS=Brucella suis GN=dxs PE=3 SV=1) HSP 1 Score: 175.637 bits (444), Expect = 2.485e-43 Identity = 89/164 (54.27%), Postives = 115/164 (70.12%), Query Frame = -2 Query: 258 DDRPSCFRFPRGNGIGAVLPPNNKGTPLEIGKGRILMEGDRVAILGYGSVVQQCVLAANMLKSQDISVTVADARFCKPLDTDLIRQLANEHEILITVEEGSVGGFGSHVCHFLTLSGILDGPLKLRSMVLPDRYIDHGSPADQLEESGLSSRHISATVLSLLGR 749 D+ P FR+PRG+G+G LP +G+ LEIGKGRI+ EG +VA+L +G+ +Q+C+ AA L + +S TVADARF KPLD DLIR+LA EHE+L+ VEEG+VGGFGSHV FL G+LD LK+R++ LPD Y DHG P E+GL I TV + L R Sbjct: 468 DEGPISFRYPRGDGVGVDLP--ERGSVLEIGKGRIVREGTKVALLSFGTRLQECLAAAEELGAAGLSTTVADARFAKPLDHDLIRRLAREHEVLVMVEEGAVGGFGSHVLQFLATDGLLDRGLKVRALTLPDIYQDHGKPDAMYAEAGLDRTGIVRTVFAALHR 629 The following BLAST results are available for this feature:
BLAST of CN181632 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 448
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181632 ID=CN181632; Name=CN181632; organism=Citrus sinensis; type=EST; length=753bpback to top |