CN181609
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB24_TOBAC (Chlorophyll a-b binding protein 40, chloroplastic OS=Nicotiana tabacum GN=CAB40 PE=2 SV=1) HSP 1 Score: 298.901 bits (764), Expect = 1.017e-93 Identity = 140/160 (87.50%), Postives = 151/160 (94.38%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 65.4698 bits (158), Expect = 1.017e-93 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AGGPLGEV DPLYPGGSFDPLG Sbjct: 171 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 200
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB21_TOBAC (Chlorophyll a-b binding protein 16, chloroplastic OS=Nicotiana tabacum GN=CAB16 PE=2 SV=1) HSP 1 Score: 298.516 bits (763), Expect = 1.326e-93 Identity = 140/160 (87.50%), Postives = 151/160 (94.38%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV L+PS +E++ G+++MRKT SK+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 171 HSP 2 Score: 65.4698 bits (158), Expect = 1.326e-93 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AGGPLGEV DPLYPGGSFDPLG Sbjct: 170 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 199
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB2G_SOLLC (Chlorophyll a-b binding protein 3C, chloroplastic OS=Solanum lycopersicum GN=CAB3C PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 2.257e-93 Identity = 139/160 (86.88%), Postives = 150/160 (93.75%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV L+PS +E++ GR++MRKT +K+ SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 13 FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 65.855 bits (159), Expect = 2.257e-93 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYRIAGGPLGEV DPLYPGGSFDPLG Sbjct: 171 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 200
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB22_TOBAC (Chlorophyll a-b binding protein 21, chloroplastic OS=Nicotiana tabacum GN=CAB21 PE=2 SV=1) HSP 1 Score: 296.59 bits (758), Expect = 5.012e-93 Identity = 137/158 (86.71%), Postives = 148/158 (93.67%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F G+AV L+PS E++ GR+SMRKT +K V+S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQV+LMG+ Sbjct: 13 FAGQAVKLSPSAPEITGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVILMGA 170 HSP 2 Score: 65.4698 bits (158), Expect = 5.012e-93 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AGGPLGEV DPLYPGGSFDPLG Sbjct: 169 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 198
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB2B_SOLLC (Chlorophyll a-b binding protein 1B, chloroplastic OS=Solanum lycopersicum GN=CAB1B PE=3 SV=1) HSP 1 Score: 296.204 bits (757), Expect = 5.012e-93 Identity = 138/158 (87.34%), Postives = 147/158 (93.04%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F G+AV L+PS +E+S GRI+MRK +KS S SPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 13 FAGQAVKLSPSASEISGNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 170 HSP 2 Score: 65.855 bits (159), Expect = 5.012e-93 Identity = 29/30 (96.67%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYRIAGGPLGEV DPLYPGGSFDPLG Sbjct: 169 GAVEGYRIAGGPLGEVVDPLYPGGSFDPLG 198
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB25_TOBAC (Chlorophyll a-b binding protein 50, chloroplastic OS=Nicotiana tabacum GN=CAB50 PE=2 SV=1) HSP 1 Score: 295.434 bits (755), Expect = 1.113e-92 Identity = 138/160 (86.25%), Postives = 151/160 (94.38%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV L+PS +E++ G+++MRKT +K+ +SSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 13 FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 65.4698 bits (158), Expect = 1.113e-92 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AGGPLGEV DPLYPGGSFDPLG Sbjct: 171 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 200
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB21_CUCSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 293.123 bits (749), Expect = 1.894e-92 Identity = 136/156 (87.18%), Postives = 146/156 (93.59%), Query Frame = 1 Query: 103 GKAVNLAPSGNELSNGGRISMRKTGSKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 G+AV L+P+ E+ + +MRKT SKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIH RWAMLGALGCVFPELL+RNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 5 GQAVKLSPNAPEIQGNAKFTMRKTASKSVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 160 HSP 2 Score: 67.0106 bits (162), Expect = 1.894e-92 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYRIAGGPLGEVTDP+YPGGSFDPLG Sbjct: 159 GAVEGYRIAGGPLGEVTDPIYPGGSFDPLG 188
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB25_NICPL (Chlorophyll a-b binding protein E, chloroplastic OS=Nicotiana plumbaginifolia GN=CABE PE=3 SV=1) HSP 1 Score: 297.36 bits (760), Expect = 2.470e-92 Identity = 139/160 (86.88%), Postives = 151/160 (94.38%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV L+PS +E++ G+++MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 12 FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 171 HSP 2 Score: 62.3882 bits (150), Expect = 2.470e-92 Identity = 27/30 (90.00%), Postives = 28/30 (93.33%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AG PLGEV DPLYPGGSFDPLG Sbjct: 170 GAVEGYRVAGEPLGEVVDPLYPGGSFDPLG 199
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB27_TOBAC (Chlorophyll a-b binding protein 7, chloroplastic OS=Nicotiana tabacum GN=CAB7 PE=3 SV=1) HSP 1 Score: 291.967 bits (746), Expect = 4.204e-92 Identity = 138/160 (86.25%), Postives = 148/160 (92.50%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F G AV L+PS +E++ G+ MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 13 FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 67.0106 bits (162), Expect = 4.204e-92 Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GA+EGYR+AGGPLGEVTDPLYPGGSFDPLG Sbjct: 171 GAIEGYRVAGGPLGEVTDPLYPGGSFDPLG 200
BLAST of CN181609 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 3.526e-91 Identity = 137/160 (85.62%), Postives = 148/160 (92.50%), Query Frame = 1 Query: 97 FVGKAVNLAPSGNELSNGGRISMRKTGSKS--VSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGS 570 F GKAV +PS +E++ G+ +MRKT +K+ VSSGSPWYGPDRVKYLGPFSGE PSYLTGEFPGDYGWDTA LSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAG+QIFSEGGLDYLGNPSL+HAQSILAIWACQVVLMG+ Sbjct: 13 FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGA 172 HSP 2 Score: 65.4698 bits (158), Expect = 3.526e-91 Identity = 28/30 (93.33%), Postives = 29/30 (96.67%), Query Frame = 2 Query: 566 GAVEGYRIAGGPLGEVTDPLYPGGSFDPLG 655 GAVEGYR+AGGPLGEV DPLYPGGSFDPLG Sbjct: 171 GAVEGYRVAGGPLGEVVDPLYPGGSFDPLG 200 The following BLAST results are available for this feature:
BLAST of CN181609 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181609 ID=CN181609; Name=CN181609; organism=Citrus sinensis; type=EST; length=655bpback to top |