CN188623
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_SOYBN (60S acidic ribosomal protein P0 OS=Glycine max PE=2 SV=1) HSP 1 Score: 248.825 bits (634), Expect = 2.064e-65 Identity = 134/184 (72.83%), Postives = 146/184 (79.35%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 QTSFFQVLNIP KINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVV SVY+NGSV+SPEVLDL+EDDL+ KFA+GVSMVT+L+LAIS PTLA APHMF+NAYKNV+AVA+ T+YSFP+ADKVKEYL DPSKF ESD DMGFSLFD Sbjct: 137 QTSFFQVLNIPTKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFSPEVLDLTEDDLIGKFAAGVSMVTSLSLAISYPTLAAAPHMFVNAYKNVLAVAVETDYSFPEADKVKEYLKDPSKFAVAAVAAPAAASGAPAAAAKEEEKKEEPAEESDDDMGFSLFD 320
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA02_ARATH (60S acidic ribosomal protein P0-2 OS=Arabidopsis thaliana GN=RPP0B PE=1 SV=2) HSP 1 Score: 247.284 bits (630), Expect = 6.005e-65 Identity = 123/142 (86.62%), Postives = 136/142 (95.77%), Query Frame = -1 Query: 277 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 702 QTSFFQVLNIP KINKGTVEIITPVELI++GDKVGSSEAALLAKLGIRPFSYGLVVQSVY+NGSV+SPEVLDL+ED LVEKFASG+SMVT+LALA+S PTLA APHMFINAYKN +A+A+ATEY+FPQA+KVKEYL DPSKF Sbjct: 136 QTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKF 277
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA01_ARATH (60S acidic ribosomal protein P0-1 OS=Arabidopsis thaliana GN=RPP0A PE=2 SV=1) HSP 1 Score: 246.899 bits (629), Expect = 7.843e-65 Identity = 131/182 (71.98%), Postives = 147/182 (80.77%), Query Frame = -1 Query: 157 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLF 702 QTSFFQVLNIP KINKGTVEIITPVELI+KGDKVGSSEAALLAKLGIRPFSYGLVV+SVY+NGSV++PEVL+L+EDDLVEKFA+GVSM+TAL+LAIS PT+A APHMF+NAYKNV+AVALATEYSFPQA+ VKE+L DP+KF ESDGDMGF LF Sbjct: 137 QTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESVYDNGSVFNPEVLNLTEDDLVEKFAAGVSMITALSLAISYPTVAAAPHMFLNAYKNVLAVALATEYSFPQAENVKEFLKDPTKF--AVAVAAPVSGESGGAVVAVAVEEEAAEESDGDMGFDLF 316
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA03_ARATH (60S acidic ribosomal protein P0-3 OS=Arabidopsis thaliana GN=RPP0C PE=1 SV=1) HSP 1 Score: 244.588 bits (623), Expect = 3.892e-64 Identity = 121/142 (85.21%), Postives = 136/142 (95.77%), Query Frame = -1 Query: 277 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 702 QTSFFQVLNIP KINKGTVEIITPVELI++GDKVGSSEAALLAKLGIRPFSYGLVVQSVY+NGSV+SPEVLDL+ED LVEKFASG+SMVT+LALA+S PTLA APHMFINAYKN +A+A+AT+Y+FPQA+KVKE+L DPSKF Sbjct: 136 QTSFFQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSYPTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKF 277
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_ORYSJ (60S acidic ribosomal protein P0 OS=Oryza sativa subsp. japonica GN=Os08g0130500 PE=1 SV=3) HSP 1 Score: 243.432 bits (620), Expect = 8.672e-64 Identity = 125/183 (68.31%), Postives = 144/183 (78.69%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 QTSFFQVLNIP KINKGTVEIITPVELI+KGDKVGSSE+ALLAKLGIRPFSYGLV+ +VY++GSV+SPEVLDL+EDDL+EKFASGVSMV +++LAIS PT+A APHMF+N YKNV+AVA+ TEYS+P ADK+KEYL DPSKF ESDGD+G SLFD Sbjct: 137 QTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISYPTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPSAAKEEEKKEEPEEESDGDLGMSLFD 319
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_MAIZE (60S acidic ribosomal protein P0 OS=Zea mays GN=RP-P0 PE=1 SV=3) HSP 1 Score: 236.113 bits (601), Expect = 1.384e-61 Identity = 126/183 (68.85%), Postives = 142/183 (77.60%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 QTSFFQVLNIP KINKGTVEIITPVELI+KG+KVGSSE+ALLAKLGIRPFSYGL V SVYE+GSV+SPEVLDLSE+DL+EKFA+GVSMV +L+LAIS PTLA PHMFIN YKNV+AVA+ T+YS+P ADK+KEYL DPSKF ESD +MGFSLFD Sbjct: 137 QTSFFQVLNIPTKINKGTVEIITPVELIKKGEKVGSSESALLAKLGIRPFSYGLQVTSVYEDGSVFSPEVLDLSEEDLIEKFATGVSMVASLSLAISYPTLAAVPHMFINGYKNVLAVAVETDYSYPHADKIKEYLKDPSKF-AVAAPVAAGDSGASAAPKEEEKAAEPEEESDEEMGFSLFD 318
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_LUPLU (60S acidic ribosomal protein P0 OS=Lupinus luteus PE=2 SV=1) HSP 1 Score: 219.935 bits (559), Expect = 1.027e-56 Identity = 122/185 (65.95%), Postives = 134/185 (72.43%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 QTSFFQVLNIP KINKGTVEIITPVELI+KGDKVGSSEAALLAKLGIRPFSYGLVV SVY+NGSV+ PEVLDL+EDDL+EKFA GVS + P + APH+FINAYKNV+AVA+ATEYSFPQAD+VKEYL DPSKF ESD +MGF LFD Sbjct: 137 QTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVLSVYDNGSVFKPEVLDLTEDDLLEKFAIGVSQCYFSDTSHFIPNPSAAPHVFINAYKNVLAVAVATEYSFPQADEVKEYLKDPSKFAAVAAAAAPAADSGAAPAAAAKAEKEEEPAEESDDEMGFGLFD 321
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_ICTPU (60S acidic ribosomal protein P0 OS=Ictalurus punctatus GN=rplp0 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.632e-44 Identity = 86/142 (60.56%), Postives = 109/142 (76.76%), Query Frame = -1 Query: 277 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKF 702 +TSFFQ L I KI++GT+EI++ V+LIR GDKVG+SEA LL L I PFSYGL++Q VY+NGSVYSPEVLD++ED L ++F GV + ++ L I PTLA PH IN YK V+ VA+ T+YSFP ADKVK +LADPS+F Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIRPGDKVGASEATLLNMLNISPFSYGLIIQQVYDNGSVYSPEVLDITEDALHKRFLEGVRNIASVCLQIGYPTLASIPHSIINGYKRVLRVAVETDYSFPMADKVKAFLADPSRF 275
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_CHICK (60S acidic ribosomal protein P0 OS=Gallus gallus GN=RPLP0 PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 6.461e-43 Identity = 89/183 (48.63%), Postives = 119/183 (65.03%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L I KI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GLV+Q V++NGS+Y+PEVLD++E+ L ++F GV V ++ L I PT+A PH +N YK V+AVA+ T+Y+FP A+KVK +LADPS F ESD DMGF LFD Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHKRFLEGVRNVASVCLQIGYPTIASVPHSIVNGYKRVLAVAVETDYTFPLAEKVKAFLADPSAFVAAAPVVVETAAPAAAAAPAKEAPKEESEESDEDMGFGLFD 316
BLAST of CN188623 vs. ExPASy Swiss-Prot
Match: RLA0_RANSY (60S acidic ribosomal protein P0 OS=Rana sylvatica GN=RPLP0 PE=2 SV=1) HSP 1 Score: 173.326 bits (438), Expect = 1.102e-42 Identity = 91/183 (49.73%), Postives = 118/183 (64.48%), Query Frame = -1 Query: 154 QTSFFQVLNIPPKINKGTVEIITPVELIRKGDKVGSSEAALLAKLGIRPFSYGLVVQSVYENGSVYSPEVLDLSEDDLVEKFASGVSMVTALALAISPPTLAVAPHMFINAYKNVVAVALATEYSFPQADKVKEYLADPSKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXESDGDMGFSLFD 702 +TSFFQ L I KI++GT+EI++ V+LI+ GDKVG+SEA LL L I PFS+GL++Q VY+NGS+YSPEVLD++ED L +F GV + ++ L I PT+A PH +N YK V+A+A+ T+YSFP ADKVK +LADPS F ESD DMGF LFD Sbjct: 134 KTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLIIQQVYDNGSIYSPEVLDITEDALRARFLEGVRNIASVCLQIGYPTVASVPHSVVNGYKRVLALAVETDYSFPLADKVKAFLADPSAF-VVAAPVAETAAAPAASAAPAKEEKEESEESDDDMGFGLFD 315 The following BLAST results are available for this feature:
BLAST of CN188623 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188623 ID=CN188623; Name=CN188623; organism=Citrus sinensis; type=EST; length=702bpback to top |