CN181561
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_NEUCR (NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial OS=Neurospora crassa GN=nuo-51 PE=2 SV=2) HSP 1 Score: 365.54 bits (937), Expect = 1.325e-100 Identity = 168/218 (77.06%), Postives = 193/218 (88.53%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCP+TV NVETVAV+PTI RRG +WFAGFGR+ N GTKLFC+SGHVN PCTVEEEMSIP++ELID+HCGGVRGGWDNLLAVIPGGSS P+LPKHICD LMD+DALK QSGLGTAA+IVMDKSTDVV AI+RLS+FY+HESCG+CTPCREG+ W IM+R + G + EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RI++ A Sbjct: 249 GCPSTVANVETVAVAPTICRRGGNWFAGFGRERNQGTKLFCISGHVNNPCTVEEEMSIPMRELIDKHCGGVRGGWDNLLAVIPGGSSTPILPKHICDTQLMDFDALKDSQSGLGTAALIVMDKSTDVVRAISRLSHFYRHESCGQCTPCREGSKWTEQIMKRFEKGQGREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIRKFA 466
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_ASPNG (NADH-ubiquinone oxidoreductase 51 kDa subunit, mitochondrial OS=Aspergillus niger GN=NUO51 PE=3 SV=1) HSP 1 Score: 363.999 bits (933), Expect = 3.856e-100 Identity = 167/218 (76.61%), Postives = 195/218 (89.45%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCP+TVTNVETVAV+PTI+RRG WF+ FGR+ N+GTKLFC+SGHVN PCTVEEEMSI L+++IDRHCGGVRGGWDNLLAVIPGGSS P+LPK ICDD LMD+DALK QSGLGTAAVIVMDKSTD+V AI+RLS FYKHESCG+CTPCREG+ W +M+R++ G A+ EIDMLQE+TKQ+EGHTICALG+A AWP+QGLIRHFRPELE RI+E++ Sbjct: 251 GCPSTVTNVETVAVTPTIMRRGASWFSSFGRERNAGTKLFCISGHVNNPCTVEEEMSISLRDVIDRHCGGVRGGWDNLLAVIPGGSSTPVLPKTICDDQLMDFDALKDSQSGLGTAAVIVMDKSTDIVRAISRLSTFYKHESCGQCTPCREGSKWTMHMMQRMEKGQAREREIDMLQELTKQVEGHTICALGEAFAWPIQGLIRHFRPELEARIREYS 468
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_DICDI (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Dictyostelium discoideum GN=ndufv1 PE=2 SV=1) HSP 1 Score: 363.229 bits (931), Expect = 6.578e-100 Identity = 169/216 (78.24%), Postives = 193/216 (89.35%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKE 652 GCPTTVTNVETVAV+PTILRRG WFA FGR N+GTKLFC+SGHVN PCTVEEEMSIPL+ELID+HCGGV GGWDNL VIPGGSSVP+LPK+ICD+VLMD+D L+ +SGLGTAAVIVM+K TD++ AIARLS FYKHESCG+CTPCREG GWL+ I +RL GNAK +EID L+E+++QIEGHTICALGDAAAWPVQGLIRHFRPE+E RIK+ Sbjct: 254 GCPTTVTNVETVAVAPTILRRGGAWFASFGRPKNAGTKLFCISGHVNNPCTVEEEMSIPLRELIDKHCGGVIGGWDNLKGVIPGGSSVPVLPKNICDNVLMDFDDLRQHRSGLGTAAVIVMNKETDMIAAIARLSKFYKHESCGQCTPCREGVGWLYDITDRLVTGNAKPDEIDSLEEISRQIEGHTICALGDAAAWPVQGLIRHFRPEIEDRIKQ 469
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_PANTR (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pan troglodytes GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 345.895 bits (886), Expect = 1.087e-94 Identity = 163/218 (74.77%), Postives = 184/218 (84.40%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCPTTV NVETVAVSPTI RRG WFAGFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A Sbjct: 237 GCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFA 454
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_HUMAN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Homo sapiens GN=NDUFV1 PE=1 SV=4) HSP 1 Score: 345.895 bits (886), Expect = 1.087e-94 Identity = 163/218 (74.77%), Postives = 184/218 (84.40%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCPTTV NVETVAVSPTI RRG WFAGFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A Sbjct: 237 GCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFA 454
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_MOUSE (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Mus musculus GN=Ndufv1 PE=1 SV=1) HSP 1 Score: 345.51 bits (885), Expect = 1.419e-94 Identity = 163/218 (74.77%), Postives = 184/218 (84.40%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCPTTV NVETVAVSPTI RRG WFAGFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A Sbjct: 237 GCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVKGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEDRMQRFA 454
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_PONPY (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Pongo pygmaeus GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 1.854e-94 Identity = 163/218 (74.77%), Postives = 184/218 (84.40%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCPTTV NVETVAVSPTI RRG WFAGFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A Sbjct: 237 GCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNYPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDAQPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFA 454
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_BOVIN (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Bos taurus GN=NDUFV1 PE=1 SV=2) HSP 1 Score: 343.969 bits (881), Expect = 4.130e-94 Identity = 162/218 (74.31%), Postives = 184/218 (84.40%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCPTTV NVETVAVSPTI RRG WFA FGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R+++ A Sbjct: 237 GCPTTVANVETVAVSPTICRRGGAWFASFGRERNSGTKLFNISGHVNNPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALIQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQQFA 454
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_MACFA (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Macaca fascicularis GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 343.584 bits (880), Expect = 5.394e-94 Identity = 162/218 (74.31%), Postives = 184/218 (84.40%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCPTTV NVETVAVSPTI RRG WFAGFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGWDNLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYK+ESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A Sbjct: 237 GCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKYESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFA 454
BLAST of CN181561 vs. ExPASy Swiss-Prot
Match: NDUV1_GORGO (NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial OS=Gorilla gorilla gorilla GN=NDUFV1 PE=2 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 7.045e-94 Identity = 161/218 (73.85%), Postives = 184/218 (84.40%), Query Frame = 2 Query: 5 GCPTTVTNVETVAVSPTILRRGPDWFAGFGRKNNSGTKLFCVSGHVNKPCTVEEEMSIPLKELIDRHCGGVRGGWDNLLAVIPGGSSVPLLPKHICDDVLMDYDALKAVQSGLGTAAVIVMDKSTDVVDAIARLSYFYKHESCGRCTPCREGTGWLWMIMERLKVGNAKLEEIDMLQEVTKQIEGHTICALGDAAAWPVQGLIRHFRPELERRIKEHA 658 GCPTTV NVETVAVSPTI RRG WF+GFGR+ NSGTKLF +SGHVN PCTVEEEMS+PLKELI++H GGV GGW+NLLAVIPGGSS PL+PK +C+ VLMD+DAL Q+GLGTAAVIVMD+STD+V AIARL FYKHESCG+CTPCREG W+ +M R G+A+ EID L E++KQIEGHTICALGD AAWPVQGLIRHFRPELE R++ A Sbjct: 237 GCPTTVANVETVAVSPTICRRGGTWFSGFGRERNSGTKLFNISGHVNHPCTVEEEMSVPLKELIEKHAGGVTGGWENLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQTGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVRGDARPAEIDSLWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEERMQRFA 454 The following BLAST results are available for this feature:
BLAST of CN181561 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181561 ID=CN181561; Name=CN181561; organism=Citrus sinensis; type=EST; length=658bpback to top |