CN188596

Overview
NameCN188596
Unique NameCN188596
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length612
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2352 contig Csv1_Contig2352:134..749. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF_PRUPE (Profilin OS=Prunus persica PE=1 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 5.439e-66
Identity = 114/129 (88.37%), Postives = 125/129 (96.90%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQAYVDDHL+CEIEGNHLSAAAIIGHDGSVWA S  FPQLKPEE+TGI+NDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVT+KK++ AL+IGIYD+PMTPGQCNMIVERLGDYL++QGL
Sbjct:    3 WQAYVDDHLMCEIEGNHLSAAAIIGHDGSVWAQSATFPQLKPEEVTGILNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKSTLALLIGIYDEPMTPGQCNMIVERLGDYLVEQGL 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF2_MALDO (Profilin-2 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 2.699e-65
Identity = 113/129 (87.60%), Postives = 124/129 (96.12%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQAYVDDHL+CEIEGNHLSAAAIIGH+GSVWA S  FPQLKPEE+TGIMNDFNEPG+LAPTGLYLGGTKYMVIQGEPG VIRGKKGPGGVT+KK++ AL+IGIYD+PMTPGQCNM+VERLGDYLI+QGL
Sbjct:    3 WQAYVDDHLMCEIEGNHLSAAAIIGHNGSVWAQSATFPQLKPEEVTGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGVVIRGKKGPGGVTVKKSTMALLIGIYDEPMTPGQCNMVVERLGDYLIEQGL 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF2_AMBAR (Profilin-2 OS=Ambrosia artemisiifolia GN=A0418 PE=1 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 4.604e-65
Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = -3
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520
            WQAYVDDHL+CEIEGNHLSAAAIIGHDG VWA S  FPQ+KPEEITGIMNDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKT+ ALIIGIYD+PM PGQCNMIVERLGDYL++QG
Sbjct:    3 WQAYVDDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQVKPEEITGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTTMALIIGIYDEPMAPGQCNMIVERLGDYLLEQG 130          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF2_HEVBR (Profilin-2 OS=Hevea brasiliensis GN=PRO2 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.026e-64
Identity = 115/128 (89.84%), Postives = 122/128 (95.31%), Query Frame = -3
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520
            WQAYVDDHL+CEIEGNHLSAAAIIG DGSVWA S NFPQ K EEITGIM+DF+EPGTLAPTGLY+GGTKYMVIQGEPGAVIRGKKGPGGVT+KKT+ ALIIGIYD+PMTPGQCNMIVERLGDYLIDQG
Sbjct:    3 WQAYVDDHLMCEIEGNHLSAAAIIGQDGSVWAQSANFPQFKSEEITGIMSDFHEPGTLAPTGLYIGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQG 130          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF1_PHAVU (Profilin-1 OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.984e-64
Identity = 112/129 (86.82%), Postives = 122/129 (94.57%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQ YVDDHLLCEIEGNHL+ AAI+G DGSVWA S +FPQ KPEEITGIMNDFNEPGTLAPTGLY+GGTKYMVIQGEPG+VIRGKKGPGGVT+KKT+ AL+IGIYD+PMTPGQCNMIVERLGDYLI+QGL
Sbjct:    3 WQTYVDDHLLCEIEGNHLTHAAILGQDGSVWAKSASFPQFKPEEITGIMNDFNEPGTLAPTGLYIGGTKYMVIQGEPGSVIRGKKGPGGVTVKKTNLALVIGIYDEPMTPGQCNMIVERLGDYLIEQGL 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF1_AMBAR (Profilin-1 OS=Ambrosia artemisiifolia GN=D106 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 2.984e-64
Identity = 113/128 (88.28%), Postives = 122/128 (95.31%), Query Frame = -3
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520
            WQAYVDDHL+CEIEGNHLSAAAIIGHDG VWA S  FPQ+KPEEITGIMNDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKT+ +LIIGIYD+PMTPGQCNM+VER GDYL++QG
Sbjct:    3 WQAYVDDHLMCEIEGNHLSAAAIIGHDGVVWAQSATFPQVKPEEITGIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTTMSLIIGIYDEPMTPGQCNMLVERPGDYLLEQG 130          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF_FRAAN (Profilin OS=Fragaria ananassa PE=1 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 3.898e-64
Identity = 112/129 (86.82%), Postives = 122/129 (94.57%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQ YVDDHL+CEIEGNHLSAAAIIG DGSVWA S  FPQLKPEE+TGI+ DF+EPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVT+KKT+ AL+IGIYD+PMTPGQCNMIVERLGDYL++QGL
Sbjct:    3 WQTYVDDHLMCEIEGNHLSAAAIIGQDGSVWAQSATFPQLKPEEVTGIVRDFDEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTTLALLIGIYDEPMTPGQCNMIVERLGDYLVEQGL 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF1_RICCO (Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 6.648e-64
Identity = 113/129 (87.60%), Postives = 120/129 (93.02%), Query Frame = -3
Query:  134 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQGL 520
            WQ YVDDHL+CEIEGNHL++AAIIG DGSVWA S  FPQ KPEEIT IMNDFNEPG+LAPTGLYL GTKYMVIQGEPGAVIRGKKGPGGVT+KKT+ ALIIGIYD+PMTPGQCNMIVERLGDYLIDQGL
Sbjct:    3 WQTYVDDHLMCEIEGNHLTSAAIIGQDGSVWAQSSTFPQFKPEEITAIMNDFNEPGSLAPTGLYLSGTKYMVIQGEPGAVIRGKKGPGGVTVKKTNQALIIGIYDEPMTPGQCNMIVERLGDYLIDQGL 131          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF1_SOYBN (Profilin-1 OS=Glycine max GN=PRO1 PE=1 SV=1)

HSP 1 Score: 242.662 bits (618), Expect = 1.134e-63
Identity = 113/128 (88.28%), Postives = 120/128 (93.75%), Query Frame = -3
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520
            WQAYVDDHLLC+IEGNHL+ AAIIG DGSVWA S +FPQ KPEEIT IMNDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVT+KKT AALIIGIYD+PMTPGQCNM+VER GDYLIDQG
Sbjct:    3 WQAYVDDHLLCDIEGNHLTHAAIIGQDGSVWAQSTDFPQFKPEEITAIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVERPGDYLIDQG 130          
BLAST of CN188596 vs. ExPASy Swiss-Prot
Match: PROF2_SOYBN (Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.934e-63
Identity = 113/128 (88.28%), Postives = 119/128 (92.97%), Query Frame = -3
Query:  137 WQAYVDDHLLCEIEGNHLSAAAIIGHDGSVWAPSENFPQLKPEEITGIMNDFNEPGTLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTIKKTSAALIIGIYDDPMTPGQCNMIVERLGDYLIDQG 520
            WQAYVDDHLLC IEGNHL+ AAIIG DGSVW  S +FPQ KPEEIT IMNDFNEPG+LAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVT+KKT AALIIGIYD+PMTPGQCNM+VERLGDYLIDQG
Sbjct:    3 WQAYVDDHLLCGIEGNHLTHAAIIGQDGSVWLQSTDFPQFKPEEITAIMNDFNEPGSLAPTGLYLGGTKYMVIQGEPGAVIRGKKGPGGVTVKKTGAALIIGIYDEPMTPGQCNMVVERLGDYLIDQG 130          
The following BLAST results are available for this feature:
BLAST of CN188596 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 88
Match NameE-valueIdentityDescription
PROF_PRUPE5.439e-6688.37Profilin OS=Prunus persica PE=1 SV=1[more]
PROF2_MALDO2.699e-6587.60Profilin-2 OS=Malus domestica PE=1 SV=1[more]
PROF2_AMBAR4.604e-6589.84Profilin-2 OS=Ambrosia artemisiifolia GN=A0418 PE=... [more]
PROF2_HEVBR1.026e-6489.84Profilin-2 OS=Hevea brasiliensis GN=PRO2 PE=1 SV=1[more]
PROF1_PHAVU2.984e-6486.82Profilin-1 OS=Phaseolus vulgaris PE=1 SV=1[more]
PROF1_AMBAR2.984e-6488.28Profilin-1 OS=Ambrosia artemisiifolia GN=D106 PE=1... [more]
PROF_FRAAN3.898e-6486.82Profilin OS=Fragaria ananassa PE=1 SV=1[more]
PROF1_RICCO6.648e-6487.60Profilin-1 OS=Ricinus communis GN=PRO1 PE=2 SV=1[more]
PROF1_SOYBN1.134e-6388.28Profilin-1 OS=Glycine max GN=PRO1 PE=1 SV=1[more]
PROF2_SOYBN1.934e-6388.28Profilin-2 OS=Glycine max GN=PRO2 PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006G07_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188596 ID=CN188596; Name=CN188596; organism=Citrus sinensis; type=EST; length=612bp
TTTTTTTTTTTTCCTTTCCCACACAGTTCCCATAACTTTGAATACTGTAA
CCTTTTAAGGCCGCAAGTTAACAGTGCGAGCTTTTTAGGGACCCTAAGAA
ATGAAACAAATTAGCGGACATGCAAACCACCTAAAGACCCTGATCAATGA
GATAATCACCAAGCCTTTCAACAATCATGTTGCACTGCCCAGGGGTCATC
GGGTCGTCATAGATTCCAATGATTAAGGCCGCACTGGTCTTCTTGATGGT
AACACCACCAGGGCCCTTCTTCCCTCGGATGACAGCACCTGGCTCACCCT
GGATCACCATATATTTTGTGCCACCAAGATACAGTCCAGTTGGTGCTAGT
GTTCCAGGTTCATTAAAGTCATTCATGATACCAGTTATTTCCTCAGGTTT
TAACTGAGGGAAGTTTTCACTCGGGGCCCAAACGCTGCCGTCGTGGCCGA
TGATAGCGGCAGCTGAAAGATGGTTACCCTCAATTTCACACAACAGATGA
TCATCGACGTAAGCTTGCCACGACATCTTTTTCTGCTTTGATGATTCCTC
TGATTTCTCTGTGAATTTTTTTTTTTCCTGAAGCCTTTTTACAAATGAGT
GTGTTTAAGCCT
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