CN188595

Overview
NameCN188595
Unique NameCN188595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2200 contig Csv1_Contig2200:88..785. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1)

HSP 1 Score: 322.398 bits (825), Expect = 1.445e-87
Identity = 157/233 (67.38%), Postives = 188/233 (80.69%), Query Frame = 3
Query:    9 MAMXXXXXXTASSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAY--NALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARF---GAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAIDGSCD 692
            MA+        SSA+DMSI+SYD+ H   ++  R++ EVM ++EAW VKHGKA   N+L EK++RFEIFKDNLRF+DEHN +N +Y++GL RFADLTN+EYRS YLGA+    G +RTSL      RY  RVG+ LP+S+DWRKKGAVAEVKDQG CGSCWAFSTI AVEGIN+IVTG LI+LSEQELVDCDTSYNEGCNGGLMDYAFEFII NGGIDT++DYP + +DG+CD
Sbjct:    8 MAILFLAMVAVSSAVDMSIISYDEKHGVSTTGGRSEAEVMSIYEAWLVKHGKAQSQNSLVEKDRRFEIFKDNLRFVDEHNEKNLSYRLGLTRFADLTNDEYRSKYLGAKMEKKGERRTSL------RYEARVGDELPESIDWRKKGAVAEVKDQGGCGSCWAFSTIGAVEGINQIVTGDLITLSEQELVDCDTSYNEGCNGGLMDYAFEFIIKNGGIDTDKDYPYKGVDGTCD 234          
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2)

HSP 1 Score: 282.722 bits (722), Expect = 1.268e-75
Identity = 140/220 (63.64%), Postives = 169/220 (76.82%), Query Frame = 3
Query:   45 SALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAIDGSCD 692
            +A DMSIVSY +         R+++E   ++  W  +HGK+YNA+GE+E+R+  F+DNLR+IDEHN+       ++++GLNRFADLTNEEYR  YLG R   +R   + K SDRYL    EALP+SVDWR KGAVAE+KDQG CGSCWAFS IAAVEGIN+IVTG LISLSEQELVDCDTSYNEGCNGGLMDYAF+FII+NGGIDTE+DYP +  D  CD
Sbjct:   19 AAADMSIVSYGE---------RSEEEARRLYAEWKAEHGKSYNAVGEEERRYAAFRDNLRYIDEHNAAADAGVHSFRLGLNRFADLTNEEYRDTYLGLRNKPRR---ERKVSDRYLAADNEALPESVDWRTKGAVAEIKDQGGCGSCWAFSAIAAVEGINQIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFDFIINNGGIDTEDDYPYKGKDERCD 226          
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: ACTN_ACTDE (Actinidain OS=Actinidia deliciosa PE=1 SV=1)

HSP 1 Score: 261.922 bits (668), Expect = 2.317e-69
Identity = 127/203 (62.56%), Postives = 159/203 (78.33%), Query Frame = 3
Query:   90 SKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAIDGSCD 692
            +K+ + RT+DEV  M+E+W +K+GK+YN+LGE E+RFEIFK+ LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS YLG   G+ +T    K S+RY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+DC  + N  GCNGG +   F+FII+NGGI+TEE+YP  A DG C+
Sbjct:   27 AKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLGFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECN 225          
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: GCP1_ARATH (Germination-specific cysteine protease 1 OS=Arabidopsis thaliana GN=GCP1 PE=2 SV=2)

HSP 1 Score: 261.536 bits (667), Expect = 3.026e-69
Identity = 128/223 (57.40%), Postives = 164/223 (73.54%), Query Frame = 3
Query:   54 DMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYN----ALGEKEKRFEIFKDNLRFIDEHNSENR--TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKR-SDRYLPRV-GEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAIDGSCDTY 698
            D SI++ D         WRTD+EV  ++  W  +HGK  N     + +++KRF IFKDNLRFID HN +N+  TYK+GL +F DLTN+EYR +YLGAR    R   K+K  + +Y   V G+ +P++VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG LISLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE+DYP +   G C+++
Sbjct:   23 DESIIN-DHLQLPSDGKWRTDEEVRSIYLQWSAEHGKTNNNNNGIINDQDKRFNIFKDNLRFIDLHNEDNKNATYKLGLTKFTDLTNDEYRKLYLGARTEPARRIAKAKNVNQKYSAAVNGKEVPETVDWRQKGAVNPIKDQGTCGSCWAFSTTAAVEGINKIVTGELISLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYRGFGGKCNSF 244          
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: ACTN_ACTCH (Actinidain OS=Actinidia chinensis PE=1 SV=4)

HSP 1 Score: 258.84 bits (660), Expect = 1.962e-68
Identity = 126/203 (62.07%), Postives = 158/203 (77.83%), Query Frame = 3
Query:   90 SKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYN-EGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAIDGSCD 692
            +K+ + RT+DEV  M+E+W +K+GK+YN+LGE E+RFEIFK+ LRFIDEHN++ NR+YKVGLN+FADLT+EE+RS YL    G+ +T    K S+RY PRVG+ LP  VDWR  GAV ++K QG CG CWAFS IA VEGINKIVTG LISLSEQEL+DC  + N  GCNGG +   F+FII+NGGI+TEE+YP  A DG C+
Sbjct:   27 AKNLTQRTNDEVKAMYESWLIKYGKSYNSLGEWERRFEIFKETLRFIDEHNADTNRSYKVGLNQFADLTDEEFRSTYLRFTSGSNKT----KVSNRYEPRVGQVLPSYVDWRSAGAVVDIKSQGECGGCWAFSAIATVEGINKIVTGVLISLSEQELIDCGRTQNTRGCNGGYITDGFQFIINNGGINTEENYPYTAQDGECN 225          
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.030e-65
Identity = 121/198 (61.11%), Postives = 154/198 (77.78%), Query Frame = 3
Query:  108 RTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNS-ENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSY-NEGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAID-GSCD 692
            R + EV  M+E W V++ K YN LGEKE+RF+IFKDNL+F+DEHNS  +RT++VGL RFADLTNEE+R++YL  +    + S+K+   +RYL + G+ LPD VDWR  GAV  VKDQG+CGSCWAFS + AVEGIN+I TG LISLSEQELVDCD  + N GC+GG+M+YAFEFI+ NGGI+T++DYP  A D G C+
Sbjct:   35 RNETEVRLMYEQWLVENRKNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYLRKKMERTKDSVKT---ERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDRGFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCN 229          
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: XCP2_ARATH (Xylem cysteine proteinase 2 OS=Arabidopsis thaliana GN=XCP2 PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 5.000e-64
Identity = 120/217 (55.30%), Postives = 156/217 (71.89%), Query Frame = 3
Query:   42 SSALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAIDGSCD 692
            +S+ D SIV Y            + D+++ +FE W     KAY  + EK  RFE+FKDNL+ IDE N + ++Y +GLN FADL++EE++ MYLG +    R   +   ++ +  R  EA+P SVDWRKKGAVAEVK+QGSCGSCWAFST+AAVEGINKIVTG+L +LSEQEL+DCDT+YN GCNGGLMDYAFE+I+ NGG+  EEDYP    +G+C+
Sbjct:   26 ASSHDYSIVGYSP------EDLESHDKLIELFENWISNFEKAYETVEEKFLRFEVFKDNLKHIDETNKKGKSYWLGLNEFADLSHEEFKKMYLGLKTDIVRRDEERSYAE-FAYRDVEAVPKSVDWRKKGAVAEVKNQGSCGSCWAFSTVAAVEGINKIVTGNLTTLSEQELIDCDTTYNNGCNGGLMDYAFEYIVKNGGLRKEEDYPYSMEEGTCE 235          
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: CYSP4_BRANA (Cysteine proteinase COT44 (Fragment) OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 7.982e-62
Identity = 116/198 (58.59%), Postives = 151/198 (76.26%), Query Frame = 3
Query:  126 MGMFEAWFVKHGKAYN----ALGEKEKRFEIFKDNLRFIDEHNSENR--TYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSD-RYLPRVG-EALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAIDGSCDT 695
            M ++  W ++HGK+ +     + ++++RF IFKDNLRFID HN  N+  TYK+GL  FA+LTN+EYRS+YLGAR    R   K+K  + +Y   V  + +P +VDWR+KGAV  +KDQG+CGSCWAFST AAVEGINKIVTG L+SLSEQELVDCD SYN+GCNGGLMDYAF+FI+ NGG++TE+DYP    +G C++
Sbjct:    1 MSIYLRWSLEHGKSNSNSNGIINQQDERFNIFKDNLRFIDLHNENNKNATYKLGLTIFANLTNDEYRSLYLGARTEPVRRITKAKNVNMKYSAAVNVDEVPVTVDWRQKGAVNAIKDQGTCGSCWAFSTAAAVEGINKIVTGELVSLSEQELVDCDKSYNQGCNGGLMDYAFQFIMKNGGLNTEKDYPYHGTNGKCNS 198          
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: XCP1_ARATH (Xylem cysteine proteinase 1 OS=Arabidopsis thaliana GN=XCP1 PE=1 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 2.322e-61
Identity = 116/214 (54.21%), Postives = 150/214 (70.09%), Query Frame = 3
Query:   48 ALDMSIVSYDKTHESKSSSWRTDDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAIDGSC 689
            A D SIV Y   H + +      D+++ +FE+W  +H KAY ++ EK  RFE+F++NL  ID+ N+E  +Y +GLN FADLT+EE++  YLG      + S K + S  +  R    LP SVDWRKKGAVA VKDQG CGSCWAFST+AAVEGIN+I TG+L SLSEQEL+DCDT++N GCNGGLMDYAF++II  GG+  E+DYP    +G C
Sbjct:   28 ARDFSIVGYTPEHLTNT------DKLLELFESWMSEHSKAYKSVEEKVHRFEVFRENLMHIDQRNNEINSYWLGLNEFADLTHEEFKGRYLG--LAKPQFSRKRQPSANFRYRDITDLPKSVDWRKKGAVAPVKDQGQCGSCWAFSTVAAVEGINQITTGNLSSLSEQELIDCDTTFNSGCNGGLMDYAFQYIISTGGLHKEDDYPYLMEEGIC 233          
BLAST of CN188595 vs. ExPASy Swiss-Prot
Match: CPR4_ARATH (Probable cysteine proteinase At4g11320 OS=Arabidopsis thaliana GN=At4g11320 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.966e-60
Identity = 113/223 (50.67%), Postives = 155/223 (69.51%), Query Frame = 3
Query:   36 TASSALDMSIVSYDKTHESKSSSWRT----DDEVMGMFEAWFVKHGKAYNALGEKEKRFEIFKDNLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMYLGARFGAKRTSLKSKRSDRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIIDNGGIDTEEDYPXQAIDGSCD 692
            + ++A+DMS+VS +  H   +   R     D E   MFE+W VKHGK Y+++ EKE+R  IF+DNLRFI   N+EN +Y++GLNRFADL+  EY  +  GA     R  +    S+RY    G+ LP SVDWR +GAV EVKDQG C SCWAFST+ AVEG+NKIVTG L++LSEQ+L++C+   N GC GG ++ A+EFI++NGG+ T+ DYP +A++G C+
Sbjct:   19 SCATAMDMSVVSSNDNHHVTAGPGRRQGIFDAEATLMFESWMVKHGKVYDSVAEKERRLTIFEDNLRFITNRNAENLSYRLGLNRFADLSLHEYGEICHGADPRPPRNHVFMTSSNRYKTSDGDVLPKSVDWRNEGAVTEVKDQGLCRSCWAFSTVGAVEGLNKIVTGELVTLSEQDLINCNKE-NNGCGGGKVETAYEFIMNNGGLGTDNDYPYKALNGVCE 240          
The following BLAST results are available for this feature:
BLAST of CN188595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 157
Match NameE-valueIdentityDescription
RD21A_ARATH1.445e-8767.38Cysteine proteinase RD21a OS=Arabidopsis thaliana ... [more]
ORYA_ORYSJ1.268e-7563.64Oryzain alpha chain OS=Oryza sativa subsp. japonic... [more]
ACTN_ACTDE2.317e-6962.56Actinidain OS=Actinidia deliciosa PE=1 SV=1[more]
GCP1_ARATH3.026e-6957.40Germination-specific cysteine protease 1 OS=Arabid... [more]
ACTN_ACTCH1.962e-6862.07Actinidain OS=Actinidia chinensis PE=1 SV=4[more]
CPR1_ARATH2.030e-6561.11Probable cysteine proteinase At3g19400 OS=Arabidop... [more]
XCP2_ARATH5.000e-6455.30Xylem cysteine proteinase 2 OS=Arabidopsis thalian... [more]
CYSP4_BRANA7.982e-6258.59Cysteine proteinase COT44 (Fragment) OS=Brassica n... [more]
XCP1_ARATH2.322e-6154.21Xylem cysteine proteinase 1 OS=Arabidopsis thalian... [more]
CPR4_ARATH1.966e-6050.67Probable cysteine proteinase At4g11320 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006G05_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006G05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188595 ID=CN188595; Name=CN188595; organism=Citrus sinensis; type=EST; length=698bp
CGTTAAAGATGGCCATGTTTTTACTTTTTCTCTTCACTGCATCATCTGCC
TTGGACATGTCGATTGTATCTTATGATAAAACCCATGAGTCAAAATCTAG
CAGCTGGAGGACCGACGATGAGGTTATGGGTATGTTCGAGGCCTGGTTTG
TGAAGCATGGCAAGGCTTATAACGCTTTGGGTGAAAAAGAGAAAAGGTTT
GAGATCTTTAAGGACAATCTTAGGTTTATTGATGAACATAACTCAGAGAA
CCGGACCTACAAGGTTGGGTTGAACCGGTTTGCTGATTTGACCAACGAGG
AGTACCGGTCCATGTATCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCC
TTGAAATCAAAGAGGAGCGATCGTTATCTGCCACGTGTCGGCGAGGCGTT
GCCGGACTCTGTTGATTGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAG
ATCAAGGAAGCTGTGGGAGTTGCTGGGCATTTTCAACCATTGCTGCTGTA
GAGGGTATAAACAAGATTGTTACAGGTAGCCTGATCTCACTATCCGAGCA
GGAGTTGGTGGATTGTGATACATCATATAATGAAGGATGTAATGGTGGTT
TGATGGACTATGCATTCGAGTTCATTATTGATAATGGAGGTATTGACACA
GAAGAAGATTACCCCTANCAAGCCATTGATGGTAGCTGTGACACATAT
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