CN188587
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188587 vs. ExPASy Swiss-Prot
Match: ALS3_ARATH (Protein ALUMINUM SENSITIVE 3 OS=Arabidopsis thaliana GN=ALS3 PE=1 SV=1) HSP 1 Score: 360.533 bits (924), Expect = 5.328e-99 Identity = 178/209 (85.17%), Postives = 200/209 (95.69%), Query Frame = -3 Query: 117 GFVLQFIFSQDNRGWIILAYLFMVIVAGYTAGQRAKHVPRGKYVAGASILAGTAVTMLMLVVLNVFPFTPRYIIPVAGMMVGNAMTVTGVTMKRLRDDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQLESKVFRTD 743 GFVLQFIF+Q+N GWIILAYLFMV VAGYTAGQRA+HVPRGKYVAG SILAGT++TM +LV+LNVFPFTPRY+IP+AGM+VGNAMTVTGVTMK+LRDDIK+QLNLVETALALGATPRQAT QQVKR+LVI+LSPVLD+ KTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNM++GA+TVSSI STYLCWP+FFTKAYQL++ VF +D Sbjct: 65 GFVLQFIFNQENSGWIILAYLFMVSVAGYTAGQRARHVPRGKYVAGLSILAGTSITMFLLVLLNVFPFTPRYMIPIAGMLVGNAMTVTGVTMKQLRDDIKMQLNLVETALALGATPRQATLQQVKRALVISLSPVLDSCKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMMVGAATVSSITSTYLCWPSFFTKAYQLQTHVFSSD 273
BLAST of CN188587 vs. ExPASy Swiss-Prot
Match: YBBM_ECOLI (UPF0014 inner membrane protein ybbM OS=Escherichia coli (strain K12) GN=ybbM PE=1 SV=2) HSP 1 Score: 147.517 bits (371), Expect = 7.088e-35 Identity = 73/201 (36.32%), Postives = 125/201 (62.19%), Query Frame = -3 Query: 141 GFVLQFIFSQDNRGWIILAYLFMVIVAGYTAGQRAKHVPRGKYVAGASILAGTAVTMLMLVVLNVFPFTPRYIIPVAGMMVGNAMTVTGVTMKRLRDDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQL 743 G+VL++IFS D+ +L LF+ A + A +R+K++ + + +I G +T+ +L++ F P +IP+AGM+ GNAM G+ L + + ++ L+LGATP+QA+ ++ S+ AL P +D+AKTVGL+SLPG M+G+I G P++AI+ QI+V ML+ +++S+I++ YL + F+ +QL Sbjct: 51 GYVLKYIFSVDDASLTLLMVLFICFNAAWNAQKRSKYIAKAFISSFIAITVGAGITLAVLILSGSIEFIPMQVIPIAGMIAGNAMVAVGLCYNNLGQRVISEQQQIQEKLSLGATPKQASAILIRDSIRAALIPTVDSAKTVGLVSLPGMMSGLIFAGIDPVKAIKYQIMVTFMLLSTASLSTIIACYLTYRKFYNSRHQL 251
BLAST of CN188587 vs. ExPASy Swiss-Prot
Match: YJKA_BACSU (UPF0014 membrane protein yjkA OS=Bacillus subtilis GN=yjkA PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.059e-30 Identity = 62/202 (30.69%), Postives = 127/202 (62.87%), Query Frame = -3 Query: 138 GFVLQFIFSQDNRGWIILAYLFMVIVAGYTAGQRAKHVPRGKYVAGASILAGTAVTMLMLVVLNVFPFTPRYIIPVAGMMVGNAMTVTGVTMKRLRDDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQLE 743 G+VL IF D+ +I+L L M+ VA +R K+ + A++ VT +L+ L++ P T RY+IP++GM++GN+M ++ + + RL ++ ++ ++ L+LG TP+Q+ ++ + ++ +++ P L++ KT+GL+ LPG MTG I+ GA P++A++ Q++++ + ++ ++ ++ + L +P+ FT QL+ Sbjct: 46 GYVLSLIFRGDHPVFILLMVLLMLAVAAQNVIKRKKNTIGSFWRVFAALAIVEIVTQGILLSLHIIPLTARYVIPISGMVIGNSMVLSSLFLNRLNSEVGVRKEEIQLILSLGGTPKQSIQRILTSAMKMSMIPTLESQKTLGLVQLPGMMTGQILAGADPIQAVRFQLLIVFTTMASAALTCVILSVLTYPSLFTVHQQLK 247
BLAST of CN188587 vs. ExPASy Swiss-Prot
Match: Y1647_SYNY3 (UPF0014 membrane protein slr1647 OS=Synechocystis sp. (strain PCC 6803) GN=slr1647 PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.310e-24 Identity = 67/207 (32.37%), Postives = 113/207 (54.59%), Query Frame = -3 Query: 141 GFVLQFIFSQDNRGWIILAYLFMVIVAGYTAGQRAKHVPRGKYVAG---ASILAGTAVTMLMLVVLNVFP---FTPRYIIPVAGMMVGNAMTVTGVTMKRLRDDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCWPAFFTKAYQL 743 G+ L +FS DN ++L M+ +A A R PR K + G S+ A TA+++ +V+ + P ++P+Y+IP+ GM++G M + +RL I+ +ET L LGATP QA + ++ +L P ++ VGL+SLPG +TG ++ G PL A QI++M +++ +T+S+I T + +F + QL Sbjct: 53 GYFLAVVFSLDNPWAVLLVLAIMLTIAAVVARNRIN--PRSKSLFGWLWLSLGASTAISLGYALVVIIQPPQWYSPQYLIPLTGMILGQTMNSASLAGERLASAIQQNPREIETHLCLGATPGQAIASYRRAAIRASLIPTVNQMMVVGLVSLPGMLTGQVLAGGDPLNASVYQILIMFLILLTNTLSTIAVTATVYRQYFNQHQQL 257
BLAST of CN188587 vs. ExPASy Swiss-Prot
Match: Y938_METJA (UPF0014 membrane protein MJ0938 OS=Methanocaldococcus jannaschii GN=MJ0938 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.254e-23 Identity = 62/193 (32.12%), Postives = 113/193 (58.55%), Query Frame = -3 Query: 171 GFVLQFIFSQDNRGWIILAYLFMVIVAGYTAGQRAKHVPRGKYVAGASI--LAGTAVTMLMLVVLNVFPFTPRYIIPVAGMMVGNAMTVTGVTMKRLRDDIKIQLNLVETALALGATPRQATKQQVKRSLVIALSPVLDNAKTVGLISLPGAMTGMIMGGASPLEAIQLQIVVMNMLIGASTVSSIMSTYLCW 743 GFVL +IFS G ++ + M+ +A Y + + K I L T V++ +L + V F P Y+IP+ GM++GN M + + ++ D +K + +++ LALGAT +A + +K ++ A+ P ++ K+VG+I +PGAM GM++ GA+P+ A ++QI++M M++ ++ +S I+ YL + Sbjct: 53 GFVLLYIFSFGMVGAFLMIGV-MITLASYLIMREINLKNKTKLFICLFITFLTTTIVSLAVLTIPKVVKFEPIYVIPLMGMVIGNTMNTIHLALDKIIDMVKSERDILWGYLALGATEIEALRPFIKNAVKSAVIPQMNRTKSVGVIFIPGAMVGMLLSGANPIYAAEIQIIIMWMILSSAVISGILICYLMY 244 The following BLAST results are available for this feature:
BLAST of CN188587 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188587 ID=CN188587; Name=CN188587; organism=Citrus sinensis; type=EST; length=745bpback to top |