CX077104
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_CITSI (Putative membrane protein ycf1 OS=Citrus sinensis GN=ycf1-A PE=3 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 1.186e-82 Identity = 150/150 (100.00%), Postives = 150/150 (100.00%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 451 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL Sbjct: 1627 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 1776
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_GOSHI (Putative membrane protein ycf1 OS=Gossypium hirsutum GN=ycf1 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 4.550e-50 Identity = 97/150 (64.67%), Postives = 116/150 (77.33%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 451 SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L Sbjct: 1690 SIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHL 1839
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_GOSBA (Putative membrane protein ycf1 OS=Gossypium barbadense GN=ycf1 PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 4.550e-50 Identity = 97/150 (64.67%), Postives = 116/150 (77.33%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 451 SIQRGEM+L IL+ +K L+EL K G+LII+P RLSVKNDGQF LYQ + I LVHKNK +I +RYQEK Y+DK F EFIA+HQKMT N++KNHYDL VPE IL P RRELR I FNS+++NGM +N VF NN K G+VL KNK+L Sbjct: 1687 SIQRGEMNLDILMIQKDLTLRELMKKGILIIDPVRLSVKNDGQFILYQTISILLVHKNKHQINQRYQEKNYIDKNHFYEFIARHQKMTENKDKNHYDLFVPENILSPNHRRELRIRISFNSRDKNGMHRNAVFLNNVKNCGQVLTKNKHL 1836
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_MORIN (Putative membrane protein ycf1 OS=Morus indica GN=ycf1 PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 1.912e-48 Identity = 93/148 (62.84%), Postives = 116/148 (78.38%), Query Frame = -2 Query: 8 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNK 451 SIQRGE++L +L+ +K F L EL K G+L+IEP RLS KN+GQF +YQ +GI+LVHK+K I +RY+EKG VD K+FDEFI+KHQKMT NR+KNHYDL VPETIL P+ RRELR LICFNS+N+NG+ N F N K VL+K+K Sbjct: 1658 SIQRGEINLDLLMIQKNFILTELIKKGILLIEPVRLSRKNEGQFIMYQTIGISLVHKSKHTINQRYREKGLVDTKNFDEFISKHQKMTENRDKNHYDLFVPETILSPRHRRELRILICFNSRNRNGIPSNAFFCNENKVKSPVLNKSK 1805
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_EUCGG (Putative membrane protein ycf1 OS=Eucalyptus globulus subsp. globulus GN=ycf1 PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 1.852e-43 Identity = 92/150 (61.33%), Postives = 109/150 (72.67%), Query Frame = -2 Query: 5 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLL-VPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKN 451 SIQRGEMSL ILIT+K L EL K G+LIIEP RLS+KNDGQ +YQ + I+L HK+K KI + Y+EK YV K + D+ IA+H KM NR KN YDLL VPE +L KRRRELR ICFNS+ +NG+ KNPVF NN K G LDK K+ Sbjct: 1676 SIQRGEMSLDILITQKDLTLTELMKKGILIIEPIRLSIKNDGQLIMYQSLNISLFHKSKPKINQIYREKSYVAKINLDKSIARHPKMAENRYKNDYDLLFVPEKVLSTKRRRELRIRICFNSRKRNGIHKNPVFCNNVKNWGEFLDKRKH 1825
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_VITVI (Putative membrane protein ycf1 OS=Vitis vinifera GN=ycf1 PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 1.200e-42 Identity = 87/152 (57.24%), Postives = 114/152 (75.00%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELTK--GGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 451 +IQRGEMSL ++ K L EL K G+ IIEP RLSVKNDGQF +YQ +GI+LVHK+K + +RY+E+ YVD K+ D+F A+ QKM GN++KNHYDLLVPE IL P+RRR+ R LICFN +N++G+ +NPVF NG + LD+NK+L Sbjct: 1687 AIQRGEMSLDLIPVHKDLTLTELMKMKRGIFIIEPIRLSVKNDGQFIMYQTIGISLVHKSKYQTNQRYREERYVDNKNCDKFSARCQKMIGNKDKNHYDLLVPENILSPRRRRKFRILICFNLRNRSGVARNPVFC-NGNSCNKFLDENKHL 1837
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_CALFG (Putative membrane protein ycf1 OS=Calycanthus floridus var. glaucus GN=ycf1 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 7.779e-42 Identity = 88/152 (57.89%), Postives = 112/152 (73.68%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFF--NNGKGGGRVLDKNKNL 451 SIQRGEM L +++ +K L EL K G+LIIEP RLS+K DGQF +YQ +GI+LVHKNK + +RY+EK YVD+ FD IA+H KM NR +N YDLLVPE IL P+RRRELR LI FNS N+N + +N VFF NN K G+ LD++K++ Sbjct: 1623 SIQRGEMRLDVMLIQKDLTLTELIKRGILIIEPVRLSIKWDGQFIMYQTIGISLVHKNKHQTNRRYREKRYVDENYFDGSIAQHGKMLVNRAENDYDLLVPENILSPRRRRELRILISFNSGNRNVVDRNLVFFNGNNVKNFGQFLDEDKHI 1774
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_BUXMI (Putative membrane protein ycf1 OS=Buxus microphylla GN=ycf1-A PE=3 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 1.016e-41 Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNG--KGGGRVLDKNKNL 451 SIQ GEMS I+ +K + EL K G+LIIEP RLS+K DGQF +YQ + I+LVHKNK++ R +EK YVDK FDE IA+H+KM G ++NHY+LLVPE I P+RRRELR ICFNS N+N + +NPVFFN K GR LD+NK+L Sbjct: 1657 SIQSGEMSPDII--QKDLTITELIKKGLLIIEPVRLSIKRDGQFIMYQTISISLVHKNKQQTNGRCREKRYVDKNYFDESIARHEKMVGTGDENHYELLVPENISSPRRRRELRIRICFNSGNKNFVDRNPVFFNENKVKHCGRFLDENKHL 1806
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_NASOF (Putative membrane protein ycf1 OS=Nasturtium officinale GN=ycf1-A PE=3 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 2.956e-41 Identity = 84/150 (56.00%), Postives = 105/150 (70.00%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 451 SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI KRY++K Y++KK ++ I K+Q T NR KNHYD VPE IL PKRRRE R LICFN K +N +N F N + VLD K+L Sbjct: 1600 SIERGEMSLDILMIEKNFTFAKLMKKGILIIEPVRLSVQNDGQRIIYRTIGISLVHKNKHKINKRYKKKSYIEKKTIEKSITKYQNKTVNRKKNHYDFFVPENILSPKRRREFRILICFNLKKKNARDRNSRFNKNIQNLTTVLDTKKDL 1749
BLAST of CX077104 vs. ExPASy Swiss-Prot
Match: YCF1_OLIPU (Putative membrane protein ycf1 OS=Olimarabidopsis pumila GN=ycf1-A PE=3 SV=1) HSP 1 Score: 166.392 bits (420), Expect = 5.042e-41 Identity = 84/150 (56.00%), Postives = 106/150 (70.67%), Query Frame = -2 Query: 2 SIQRGEMSLPILITKKKFALKELTKGGMLIIEPRRLSVKNDGQFFLYQIVGIALVHKNKRKITKRYQEKGYVDKKDFDEFIAKHQKMTGNRNKNHYDLLVPETILLPKRRRELRTLICFNSKNQNGMQKNPVFFNNGKGGGRVLDKNKNL 451 SI+RGEMSL IL+ +K F +L K G+LIIEP RLSV+NDGQ +Y+ +GI+LVHKNK KI+KRY++K Y+DKK ++ I K+QK T NR KN+YD VPE IL PKRRRE R LICFN K + +N F N + VL K K+L Sbjct: 1592 SIERGEMSLDILMIEKNFTFAKLMKKGILIIEPIRLSVQNDGQLIIYRTIGISLVHKNKHKISKRYKKKSYIDKKKIEKSITKYQKKTVNRKKNNYDFFVPENILSPKRRREFRILICFNLKKKTVRDRNSRFDKNIQNWTTVLHKKKDL 1741 The following BLAST results are available for this feature:
BLAST of CX077104 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 61
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Sequences
The
following sequences are available for this feature:
EST sequence >CX077104 ID=CX077104; Name=CX077104; organism=Citrus sinensis; type=EST; length=452bpback to top |