CN181483
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_TOBAC (Proliferating cell nuclear antigen OS=Nicotiana tabacum GN=PCNA PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 7.233e-51 Identity = 93/101 (92.08%), Postives = 96/101 (95.05%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQ+MDSSHVALVALLLRSEGFEHYRCDRNISMGMNL N++KMLKCAGNDDIITLKADDGSDT T MFESPTQDKIADFEMKLMDID EHLGIP AEYHA Sbjct: 35 FSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLANMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHA 135 HSP 2 Score: 30.8018 bits (68), Expect = 7.233e-51 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 5 NDANFDCSATGF 40 NDANFDCSATGF Sbjct: 24 NDANFDCSATGF 35
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_PEA (Proliferating cell nuclear antigen OS=Pisum sativum GN=PCNA PE=2 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 1.229e-50 Identity = 91/101 (90.10%), Postives = 97/101 (96.04%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQ+MDSSHVALVALLLRSEGFEHYRCDRN+SMGMNLNN++KMLKCAGNDDIIT+KADDGSDT T MFESPTQDKI+DFEMKLMDID EHLGIP AEYHA Sbjct: 35 FSLQAMDSSHVALVALLLRSEGFEHYRCDRNLSMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHLGIPEAEYHA 135 HSP 2 Score: 29.6462 bits (65), Expect = 1.229e-50 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 5 NDANFDCSATGF 40 NDANFDCS+TGF Sbjct: 24 NDANFDCSSTGF 35
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA1_DAUCA (Proliferating cell nuclear antigen OS=Daucus carota PE=3 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 1.602e-50 Identity = 91/101 (90.10%), Postives = 96/101 (95.05%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQ+MDSSHVALVA+LLRSEGFEHYRCDRNISMGMNL N++KMLKCAGNDDIIT+KADDGSDT T MFESPTQDKIADFEMKLMDID EHLGIP AEYHA Sbjct: 35 FSLQAMDSSHVALVAVLLRSEGFEHYRCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHA 135 HSP 2 Score: 30.8018 bits (68), Expect = 1.602e-50 Identity = 12/12 (100.00%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 5 NDANFDCSATGF 40 NDANFDCSATGF Sbjct: 24 NDANFDCSATGF 35
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA2_ARATH (Proliferating cell nuclear antigen 2 OS=Arabidopsis thaliana GN=At2g29570 PE=1 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 1.024e-49 Identity = 90/101 (89.11%), Postives = 96/101 (95.05%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQ+MDSSHVALV+LLLRSEGFEHYRCDRN+SMGMNL N+SKMLKCAGNDDIIT+KADDGSDT T MFESPTQDKIADFEMKLMDID EHLGIP AEYH+ Sbjct: 35 FSLQAMDSSHVALVSLLLRSEGFEHYRCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPDAEYHS 135 HSP 2 Score: 29.261 bits (64), Expect = 1.024e-49 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 5 NDANFDCSATGF 40 NDANFDCS TGF Sbjct: 24 NDANFDCSTTGF 35
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_CATRO (Proliferating cell nuclear antigen OS=Catharanthus roseus PE=2 SV=1) HSP 1 Score: 190.66 bits (483), Expect = 1.739e-49 Identity = 92/101 (91.09%), Postives = 96/101 (95.05%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQ+MDSSHVALVALLLRSEGFEHYRCDRN SMGMNLNN++KMLKCAGNDDIITLKADDGSDT T MFESPTQDKI+DFEMKLMDID EHLGIP AEYHA Sbjct: 35 FSLQAMDSSHVALVALLLRSEGFEHYRCDRNPSMGMNLNNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHLGIPEAEYHA 135 HSP 2 Score: 26.9498 bits (58), Expect = 1.739e-49 Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 2 Query: 8 DANFDCSATGF 40 DANFDCSA+GF Sbjct: 25 DANFDCSASGF 35
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA1_ARATH (Proliferating cellular nuclear antigen 1 OS=Arabidopsis thaliana GN=PCNA PE=1 SV=2) HSP 1 Score: 187.578 bits (475), Expect = 2.268e-49 Identity = 89/101 (88.12%), Postives = 95/101 (94.06%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQ+MDSSHVALV+LLLRSEGFEHYRCDRN+SMGMNL N+SKMLKCAGNDDIIT+KADDG DT T MFESPTQDKIADFEMKLMDID EHLGIP AEYH+ Sbjct: 35 FSLQAMDSSHVALVSLLLRSEGFEHYRCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPDAEYHS 135 HSP 2 Score: 29.6462 bits (65), Expect = 2.268e-49 Identity = 11/12 (91.67%), Postives = 12/12 (100.00%), Query Frame = 2 Query: 5 NDANFDCSATGF 40 NDANFDCS+TGF Sbjct: 24 NDANFDCSSTGF 35
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_SOYBN (Proliferating cell nuclear antigen (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 5.264e-49 Identity = 92/101 (91.09%), Postives = 97/101 (96.04%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQ+MDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNN++KMLKCAGNDDIIT+KADDGSDT T MFESPTQDKI+DFEMKLMDID EHLGIP AEYHA Sbjct: 5 FSLQAMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKISDFEMKLMDIDSEHLGIPEAEYHA 105
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_BRANA (Proliferating cell nuclear antigen OS=Brassica napus PE=2 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 1.449e-48 Identity = 88/101 (87.13%), Postives = 94/101 (93.07%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQ+MDSSHVALV+LLLRSEGFEHYRCDRN+SMGMNL N+SKMLKCAGNDDIIT+KADDG DT T MFESP QDKIADFEMKLMDID EHLGIP AEYH+ Sbjct: 35 FSLQAMDSSHVALVSLLLRSEGFEHYRCDRNLSMGMNLGNMSKMLKCAGNDDIITIKADDGGDTVTFMFESPKQDKIADFEMKLMDIDSEHLGIPDAEYHS 135 HSP 2 Score: 29.261 bits (64), Expect = 1.449e-48 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 5 NDANFDCSATGF 40 NDANFDCS TGF Sbjct: 24 NDANFDCSTTGF 35
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_POPNI (Proliferating cell nuclear antigen OS=Populus nigra GN=PCNA PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 4.182e-48 Identity = 91/101 (90.10%), Postives = 94/101 (93.07%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQSMDSSHVALVALLL+SEGFEHYRCDRN SMGMNL N+SKMLKCAGNDDIIT+K DDGSDT T MFESPTQDKIADFEMKLMDID EHLGIP AEYHA Sbjct: 35 FSLQSMDSSHVALVALLLKSEGFEHYRCDRNTSMGMNLGNMSKMLKCAGNDDIITIKGDDGSDTVTFMFESPTQDKIADFEMKLMDIDSEHLGIPEAEYHA 135 HSP 2 Score: 23.8682 bits (50), Expect = 4.182e-48 Identity = 9/12 (75.00%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 5 NDANFDCSATGF 40 NDANFD S++GF Sbjct: 24 NDANFDFSSSGF 35
BLAST of CN181483 vs. ExPASy Swiss-Prot
Match: PCNA_MAIZE (Proliferating cell nuclear antigen OS=Zea mays GN=PCNA PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 4.183e-48 Identity = 87/101 (86.14%), Postives = 95/101 (94.06%), Query Frame = 3 Query: 39 FSLQSMDSSHVALVALLLRSEGFEHYRCDRNISMGMNLNNVSKMLKCAGNDDIITLKADDGSDTATLMFESPTQDKIADFEMKLMDIDREHLGIPHAEYHA 341 FSLQ+MDSSHVALVALLLR+EGFEHYRCDRN+SMGMNLNN++KML+CAGNDDIIT+KADDGSDT T MFESP QDKIADFEMKLMDID EHLGIP +EY A Sbjct: 35 FSLQAMDSSHVALVALLLRAEGFEHYRCDRNLSMGMNLNNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPKQDKIADFEMKLMDIDSEHLGIPDSEYQA 135 HSP 2 Score: 29.261 bits (64), Expect = 4.183e-48 Identity = 11/12 (91.67%), Postives = 11/12 (91.67%), Query Frame = 2 Query: 5 NDANFDCSATGF 40 NDANFDCS TGF Sbjct: 24 NDANFDCSGTGF 35 The following BLAST results are available for this feature:
BLAST of CN181483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 35
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Sequences
The
following sequences are available for this feature:
EST sequence >CN181483 ID=CN181483; Name=CN181483; organism=Citrus sinensis; type=EST; length=341bpback to top |