CK940126

Overview
NameCK940126
Unique NameCK940126
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_CRYNE (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans GN=ATP23 PE=3 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 2.109e-34
Identity = 71/164 (43.29%), Postives = 98/164 (59.76%), Query Frame = 2
Query:  119 QRSLRN--PTVKFLRQHLEKAGCGFGDKFIKAVHCDKKIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDWSNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYC-SAAAAKDAMEAVWDVCYNDTQPFD 601
            +R L N  P + FL  HL+ AGC F    ++   C +  AGG+    GIL+C +    +  +   + HEL+HA+D CR   +DW N  HHACSEIRA +LSGDC + RE+ RG+       Q CV+RR + SV+ANP C S   A+ A+  VW+ C+ DT+PFD
Sbjct:   62 KRDLMNYSPMITFLLNHLKLAGCPFPSSAMQCHPCPENRAGGFSPDHGILLCQDRFFNKKHMEDTLAHELVHAFDHCRF-KVDWGNLRHHACSEIRAANLSGDCRFTREVKRGFYAFNKQHQACVKRRAILSVLANPACTSPEMAEKAVNEVWESCFTDTRPFD 224          
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_YARLI (Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica GN=ATP23 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.860e-33
Identity = 69/159 (43.40%), Postives = 95/159 (59.75%), Query Frame = 2
Query:  134 NPTVKFLRQHLEKAGCGFGDKFIKAVHCDKKIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDWSNCAHHACSEIRAGHLSGDCHYKRELLRGYMK--IRGHEQDCVRRRVMKSVIANPYC-SAAAAKDAMEAVWDVCYNDTQPFD 601
            +PTV+F++  +EK G       +   HCD   AGG+    GILVC NH+  +  +   + HE++H YD  +   +DW N  HHACSEIRA  LSG+C    EL++G +    RGH Q+C +RR + SV+ANP C   A A   +  VWD C+NDT+PFD
Sbjct:   90 SPTVRFMKDQIEKIGGDISSNNVFCDHCDDFKAGGFHPKYGILVCQNHVKSRSHLEDTLAHEMVHYYDNTK-FKVDWMNLKHHACSEIRASTLSGECRMMNELMKGKLARLTRGH-QECAKRRAILSVMANPGCKDEAQATQVVNEVWDSCFNDTRPFD 246          
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_XENLA (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.367e-32
Identity = 79/200 (39.50%), Postives = 120/200 (60.00%), Query Frame = 2
Query:   95 NEECQDMIQRSL-RNPTVKFLRQHLEKAGCG-FGDKFIKAVHCDKKIAGGYVRGEG-ILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDW-SNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAVWDVCYNDTQPFDRAP*SMFTANAKLAGAQSSCIQENDRF 682
            N +CQ M++ +L  +P  K L   ++++GC  + D+      CD  ++GG+      I++C N+++ Q  +N+V+ HELIHA+D CR A++DW +N  H ACSEIRA +LSGDC    EL R    ++GH Q CVR R ++S++A    S   A+ A++ V+D C+ND +PF R P S   A+AK A       Q  DR+
Sbjct:   38 NHKCQLMLKIALDTSPYAKLLLDAMKQSGCTVYKDRHFSCEECDGSVSGGFDAATSEIVLCQNNIHQQSHMNRVVTHELIHAFDHCR-AHVDWFNNVRHLACSEIRAANLSGDCTLANELTRFKFGVKGHHQVCVRDRALRSILAVRNISRETAEKAVDEVFDSCFNDHEPFGRIPHS--KADAKFAYRD---FQNRDRY 231          
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_XENTR (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus tropicalis GN=TEgg079g08.1 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.151e-30
Identity = 76/200 (38.00%), Postives = 116/200 (58.00%), Query Frame = 2
Query:   95 NEECQDMIQRSL-RNPTVKFLRQHLEKAGCG-FGDKFIKAVHCDKKIAGGYVRGEG-ILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDW-SNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAVWDVCYNDTQPFDRAP*SMFTANAKLAGAQSSCIQENDRF 682
            N +CQ M++ +L  +P  K L   ++  GC  + D+      CD  ++GG+      I++C N+++ Q  +N+V+ HELIHA+D CR A++DW +N  H ACSEIRA +LSGDC    EL R    ++ H + CVR R ++S++A    S   A+ A++ V+D C+ND +PF R P S    +AK A       Q  DR+
Sbjct:   38 NHKCQVMLKIALDTSPYAKLLLDAMKHTGCTVYKDRHFSCEECDGSVSGGFDAATSEIVLCQNNIHQQSHMNRVVTHELIHAFDHCR-AHVDWFNNVRHLACSEIRAANLSGDCTLANELTRFKFGVKEHHKVCVRDRALRSILAVRNVSRETAEKAVDEVFDSCFNDHEPFGRIPHS--KTDAKFAHRD---FQNRDRY 231          
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_HUMAN (Mitochondrial inner membrane protease ATP23 homolog OS=Homo sapiens GN=XRCC6BP1 PE=1 SV=3)

HSP 1 Score: 131.339 bits (329), Expect = 5.375e-30
Identity = 68/177 (38.42%), Postives = 108/177 (61.02%), Query Frame = 2
Query:   92 TNEECQDMIQRSLR-NPTVKFLRQHLEKAGCGFG-DKFIKAVHCDKKIAGGYVRGEG-ILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDW-SNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAVWDVCYNDTQPFDRAP 610
            +N++CQ  + ++L  NP VK L   ++ +GC    D+      C+  ++GG+      I++C N+++ Q  +N+V+ HELIHA+D CR A++DW +N  H ACSE+RA +LSGDC    E+ R +  ++ H Q CVR R   S++A    S   AK A++ V++ C+ND +PF R P
Sbjct:   48 SNQKCQLRLLKTLETNPYVKLLLDAMKHSGCAVNKDRHFSCEDCNGNVSGGFDASTSQIVLCQNNIHNQAHMNRVVTHELIHAFDHCR-AHVDWFTNIRHLACSEVRAANLSGDCSLVNEIFRLHFGLKQHHQTCVRDRATLSILAVRNISKEVAKKAVDEVFESCFNDHEPFGRIP 223          
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_DANRE (Mitochondrial inner membrane protease ATP23 homolog OS=Danio rerio GN=zgc:162885 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.564e-29
Identity = 80/228 (35.09%), Postives = 119/228 (52.19%), Query Frame = 2
Query:    8 GRRVRDMSEEPAPKSIPESSSSA-----------VNGGRTNE------------ECQDMIQRSL-RNPTVKFLRQHLEKAGCG-FGDKFIKAVHCDKKIAGGYVRGEG-ILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDW-SNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYCSAAAAKDAMEAVWDVCYNDTQPFDRAP 610
            G +  D+S EP  +  P  SS               G R  +            +CQ M+Q ++  +P  K L   ++ +GC  F D+      CD  ++GG+      I++C N+++ Q  +N+V+ HELIHA+D CR A +DW SN  H ACSEIRA +LSGDC +  E  R    +R H Q+CVR R ++S++A    S   A+  ++ V+D C+ND  PF R P
Sbjct:    5 GAKAADLSREPPGEQKPSPSSRQNEEDLGYNLYPERGSRLKKSTVEESLFTFKHKCQLMLQFAMDTSPYAKLLLGAMKSSGCTVFKDRHFSCEDCDGTVSGGFDAATSQIVLCQNNIHQQAHMNRVVTHELIHAFDHCR-AQVDWFSNYRHLACSEIRAANLSGDCSFINEFSRFNFGLRKHHQECVRGRALRSILAVRRVSREEAERVVDEVFDSCFNDHAPFGRIP 231          
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_SCHPO (Mitochondrial inner membrane protease atp23 OS=Schizosaccharomyces pombe GN=atp23 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.668e-29
Identity = 65/169 (38.46%), Postives = 102/169 (60.36%), Query Frame = 2
Query:  110 DMIQRSL--RNPTVKFLRQHLEKAGCGFGDKFIKAVHCDKKIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDWSNCAHHACSEIRAGHLSGDCHYKRELLRGYMK-IRGHEQDCVRRRVMKSVIANPYC-SAAAAKDAMEAVWDVCYNDTQPFDR 604
            + ++R+L  ++P + FL+  L++  C    K I    CD +  GGY+ G+GI++C N +  +      I HE+IH +D+ R   +DW+N  H ACSEIRA  +SG+C + +EL  G +K  R H Q+CV+RR   SV  NP C S   A+  +E V++ C+ND +PF++
Sbjct:   16 ERVKRALMSQSPVIIFLKTALDRLNCNIEAKDISCQPCDAQSTGGYIPGKGIVLCENRLYTKKMAENTIAHEMIHMFDDHR-FEVDWNNLRHQACSEIRASSMSGECRWTKELRFGNIKTFRKHHQECVKRRATISVQGNPNCKSKEQAEAIVEEVFNSCFNDFRPFEK 183          
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_PICGU (Mitochondrial inner membrane protease ATP23 OS=Pichia guilliermondii GN=ATP23 PE=3 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.324e-28
Identity = 66/159 (41.51%), Postives = 95/159 (59.75%), Query Frame = 2
Query:  134 NPTVKFLRQHLEKAGCGFGDKFIKAVHCDKKIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDWSNCAHHACSEIRAGHLSGDCHYKRELLR-GYMKIRGHEQDCVRRRVMKSVIANPYCSA-AAAKDAMEAVWDVCYNDTQPFDR 604
            +P+VKF+ +H++K G     K I    CD    GG+    GIL+CSN +  + ++  ++ HEL+HAYD  +   +D +N  HHAC+EIRA  LSG+C    E+ + G        Q CVRRR   SV ANP CS+   A+  + AVW+ C+NDT+PF+R
Sbjct:   82 SPSVKFMMEHVQKLGGNLSSKNITCDMCDGMKGGGFHPEMGILLCSNWIKDKWQLEDILTHELVHAYDHLK-FKVDLTNLKHHACTEIRASALSGECRILNEIKKTGLGDFGSKFQACVRRRAAISVSANPNCSSKEEAESVVNAVWESCFNDTRPFER 239          
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_MALGO (Mitochondrial inner membrane protease ATP23 OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=ATP23 PE=3 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 2.258e-28
Identity = 78/218 (35.78%), Postives = 114/218 (52.29%), Query Frame = 2
Query:   11 RRVRDMSEEPAPKSIPESSSSAVNGGRTNEECQDMIQRSLRNPTVKFLRQHLEKAGC------------GFGDKFIKAVHCDKKIAGGY--------VRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDWSNCAHHACSEIRAGHLSGDCHYKRELLRGYMKIRGHEQDCVRRRVMKSVIANPYC-SAAAAKDAMEAVWDVCYNDTQPFD 601
            R + D+S   +P +  E+    +  GR  +  +D+++ S   P V+F+ +HL    C            G   K + A  C   IAGG+            GIL+C+N +  +  +   I HE+IH +D CR   +DW N  HHACSEIRA  LSGDC++ RE+ R +  +    Q+CV+RR + SV  NP C S   A   +E VWD C++DT+PFD
Sbjct:   29 RSLVDVSSPLSPDT--ETREDVIARGRCEQWKEDLLRTS---PMVRFMVKHLTLIQCNPLSPREDSASQGTPPKLLIA-SCPPDIAGGFSPSPPERPTAESGILLCANRIFSKAHLEDTISHEMIHWWDHCRF-KVDWGNLRHHACSEIRAASLSGDCNWTREINRRHFALSKQHQNCVKRRGILSVRGNPACKSEEMAMKVVEDVWDSCFHDTRPFD 239          
BLAST of CK940126 vs. ExPASy Swiss-Prot
Match: ATP23_COCIM (Mitochondrial inner membrane protease ATP23 OS=Coccidioides immitis GN=ATP23 PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.852e-28
Identity = 67/172 (38.95%), Postives = 95/172 (55.23%), Query Frame = 2
Query:   98 EECQDMIQRSLR-NPTVKFLRQHLEKAGCGFGDKFIKAVHCDKKIAGGYVRGEGILVCSNHMNIQDEVNQVIIHELIHAYDECRTANLDW-SNCAHHACSEIRAGHLSGDCHYKRELL-RGYMKIRGHEQDCVRRRVMKSVIANPYC-SAAAAKDAMEAVWDVCYNDTQPFD 601
            + C+D     L+ +P ++FL+ ++++ G       I    C  + AGG+    GI +C+N M  Q  +   + HE+IHAYD  R   +DW  N  H AC+EIRA +LSG+C + RE   RG  K   H Q+CVRRR + SV A P C     A   +  VWD C+ DT+PFD
Sbjct:   63 KRCEDQRDYLLQYSPLIRFLQDNIQQLGGNISKHNIFCRRCKNRQAGGFDPDYGIQICANEMRNQGHLEDTLAHEMIHAYDHMR-FKVDWDDNLRHAACAEIRASNLSGECRWMREFFSRGQWKFAQHHQECVRRRAILSVQARPACKDEQHATQVVNEVWDSCFRDTRPFD 233          
The following BLAST results are available for this feature:
BLAST of CK940126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
ATP23_CRYNE2.109e-3443.29Mitochondrial inner membrane protease ATP23 OS=Cry... [more]
ATP23_YARLI8.860e-3343.40Mitochondrial inner membrane protease ATP23 OS=Yar... [more]
ATP23_XENLA3.367e-3239.50Mitochondrial inner membrane protease ATP23 homolo... [more]
ATP23_XENTR3.151e-3038.00Mitochondrial inner membrane protease ATP23 homolo... [more]
ATP23_HUMAN5.375e-3038.42Mitochondrial inner membrane protease ATP23 homolo... [more]
ATP23_DANRE1.564e-2935.09Mitochondrial inner membrane protease ATP23 homolo... [more]
ATP23_SCHPO2.668e-2938.46Mitochondrial inner membrane protease atp23 OS=Sch... [more]
ATP23_PICGU1.324e-2841.51Mitochondrial inner membrane protease ATP23 OS=Pic... [more]
ATP23_MALGO2.258e-2835.78Mitochondrial inner membrane protease ATP23 OS=Mal... [more]
ATP23_COCIM3.852e-2838.95Mitochondrial inner membrane protease ATP23 OS=Coc... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004741_C03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK940126 ID=CK940126; Name=CK940126; organism=Citrus sinensis; type=EST; length=752bp
GGGGGGGGGCAGGCGAGTCAGAGATATGTCAGAGGAACCCGCCCCGAAAT
CCATACCCGAGAGCTCCTCCTCCGCCGTCAACGGCGGGAGAACCAATGAG
GAGTGCCAAGACATGATTCAAAGAAGCCTCAGAAATCCTACGGTGAAATT
CTTGAGGCAGCATTTGGAGAAAGCTGGGTGCGGATTTGGTGACAAGTTCA
TTAAAGCTGTACATTGTGATAAGAAGATTGCTGGTGGCTATGTTCGCGGT
GAAGGGATTTTGGTTTGTAGTAATCACATGAACATCCAAGATGAGGTCAA
CCAAGTAATTATACATGAGCTAATTCATGCATATGATGAATGCCGGACTG
CAAACTTGGATTGGTCTAATTGCGCTCATCATGCCTGTAGTGAGATTCGT
GCTGGTCATCTAAGTGGTGATTGTCACTACAAACGGGAATTACTGCGGGG
TTACATGAAGATAAGAGGCCATGAACAGGATTGTGTGAGAAGAAGAGTCA
TGAAATCGGTGATTGCTAACCCTTACTGCTCTGCGGCAGCAGCAAAGGAT
GCCATGGAAGCTGTCTGGGATGTCTGTTACAATGATACACAACCCTTTGA
TAGAGCACCTTGAAGCATGTTTACAGCCAATGCCAAACTAGCTGGTGCTC
AATCCAGTTGTATCCAAGAAAATGATCGCTTTTTGCAGCAAGGAGTATGC
TCAGATTTTTTAGTTTCATTTGATAGAATTCAAGAAGAGGATTCATTTAC
TT
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