CK940096
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_WHEAT (40S ribosomal protein S29 OS=Triticum aestivum GN=RPS29 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 4.985e-20 Identity = 32/39 (82.05%), Postives = 36/39 (92.31%), Query Frame = 1 Query: 130 SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 246 SR CRVCGN H +IRKYGLMCCRQCFRS+AK+IGF+KYR Sbjct: 18 SRVCRVCGNSHGLIRKYGLMCCRQCFRSDAKDIGFIKYR 56 HSP 2 Score: 38.1206 bits (87), Expect = 4.985e-20 Identity = 14/15 (93.33%), Postives = 14/15 (93.33%), Query Frame = 2 Query: 80 MGHSNVWNSHPKTYG 124 MGHSNVWNSHPK YG Sbjct: 1 MGHSNVWNSHPKNYG 15
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_ARATH (40S ribosomal protein S29 OS=Arabidopsis thaliana GN=RPS29A PE=3 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 5.486e-15 Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 1 Query: 124 P*SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 246 P SR CRVCGN H +IRKYGL CCRQCFRSNAKEIGF+KYR Sbjct: 16 PGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIKYR 56
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_GRIJA (40S ribosomal protein S29 OS=Griffithsia japonica GN=RPS29 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 4.267e-14 Identity = 25/39 (64.10%), Postives = 32/39 (82.05%), Query Frame = 1 Query: 130 SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 246 SR+C++CGN H +IRKY + CRQCFR AK+IGF+KYR Sbjct: 18 SRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56 HSP 2 Score: 31.5722 bits (70), Expect = 4.267e-14 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 80 MGHSNVWNSHPKTYG 124 MGH N+W SHP+ YG Sbjct: 1 MGHQNIWYSHPRKYG 15
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_IXOSC (40S ribosomal protein S29 OS=Ixodes scapularis GN=RpS29 PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 2.172e-12 Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 1 Query: 124 P*SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 240 P SR CRVC N H +IRKYGL CR+CFR A +IGF K Sbjct: 16 PGSRYCRVCANHHGLIRKYGLNICRRCFRQYAADIGFKK 54 HSP 2 Score: 34.2686 bits (77), Expect = 2.172e-12 Identity = 11/16 (68.75%), Postives = 13/16 (81.25%), Query Frame = 2 Query: 80 MGHSNVWNSHPKTYGP 127 MGH N+W SHP+ YGP Sbjct: 1 MGHENIWYSHPRKYGP 16
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_GUITH (40S ribosomal protein S29A OS=Guillardia theta GN=rps29A PE=3 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 4.763e-12 Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 1 Query: 130 SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 246 SR CR+CGN +IRKYGL CRQCFR ++ +GF KYR Sbjct: 18 SRGCRICGNRSGLIRKYGLSICRQCFREKSQNLGFDKYR 56 HSP 2 Score: 30.0314 bits (66), Expect = 4.763e-12 Identity = 9/15 (60.00%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 80 MGHSNVWNSHPKTYG 124 M H N+WN H +TYG Sbjct: 1 MSHKNIWNKHSRTYG 15
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_PLUXY (40S ribosomal protein S29 OS=Plutella xylostella GN=RpS29 PE=3 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 8.039e-12 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 1 Query: 130 SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 240 SR+CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 18 SRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54 HSP 2 Score: 31.9574 bits (71), Expect = 8.039e-12 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 80 MGHSNVWNSHPKTYG 124 MGH+N+W SHP+ YG Sbjct: 1 MGHANIWYSHPRKYG 15
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_SCALT (40S ribosomal protein S29 OS=Scarabaeus laticollis GN=RpS29 PE=3 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 1.044e-11 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 1 Query: 130 SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 240 SR+CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 18 SRSCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54 HSP 2 Score: 31.5722 bits (70), Expect = 1.044e-11 Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2 Query: 80 MGHSNVWNSHPKTYG 124 MGH N+W SHP+ YG Sbjct: 1 MGHQNIWYSHPRKYG 15
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_SPOFR (40S ribosomal protein S29 OS=Spodoptera frugiperda GN=RpS29 PE=3 SV=1) HSP 1 Score: 56.9954 bits (136), Expect = 1.044e-11 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 1 Query: 130 SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 240 SR+CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 18 SRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54 HSP 2 Score: 31.9574 bits (71), Expect = 1.044e-11 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 80 MGHSNVWNSHPKTYG 124 MGH+N+W SHP+ YG Sbjct: 1 MGHANIWYSHPRRYG 15
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_BOMMO (40S ribosomal protein S29 OS=Bombyx mori GN=RpS29 PE=3 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 1.762e-11 Identity = 24/37 (64.86%), Postives = 27/37 (72.97%), Query Frame = 1 Query: 130 SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVK 240 SR+CR C N H +IRKYGL CRQCFR A +IGF K Sbjct: 18 SRSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54 HSP 2 Score: 31.9574 bits (71), Expect = 1.762e-11 Identity = 10/15 (66.67%), Postives = 13/15 (86.67%), Query Frame = 2 Query: 80 MGHSNVWNSHPKTYG 124 MGH+N+W SHP+ YG Sbjct: 1 MGHANIWYSHPRRYG 15
BLAST of CK940096 vs. ExPASy Swiss-Prot
Match: RS29_ASHGO (40S ribosomal protein S29 OS=Ashbya gossypii GN=RPS29 PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 2.973e-11 Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 1 Query: 130 SRACRVCGNPHAIIRKYGLMCCRQCFRSNAKEIGFVKYR 246 SR CRVC + +IRKYGL CRQCFR A +IGF KYR Sbjct: 18 SRQCRVCASHSGLIRKYGLNICRQCFREKANDIGFHKYR 56 HSP 2 Score: 29.6462 bits (65), Expect = 2.973e-11 Identity = 10/15 (66.67%), Postives = 11/15 (73.33%), Query Frame = 2 Query: 80 MGHSNVWNSHPKTYG 124 M H NVW SHP+ YG Sbjct: 1 MAHENVWFSHPRNYG 15 The following BLAST results are available for this feature:
BLAST of CK940096 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CK940096 ID=CK940096; Name=CK940096; organism=Citrus sinensis; type=EST; length=474bpback to top |