CK940093

Overview
NameCK940093
Unique NameCK940093
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY_CITMA (Citrate synthase, mitochondrial OS=Citrus maxima GN=CIT PE=2 SV=1)

HSP 1 Score: 223.402 bits (568), Expect = 7.476e-58
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEKNCKKAA 323
            CQREFALKHLPDDPLFQLVSKL+EVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEKNCKKAA
Sbjct:  365 CQREFALKHLPDDPLFQLVSKLYEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEKNCKKAA 471          
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY4_ARATH (Citrate synthase 4, mitochondrial OS=Arabidopsis thaliana GN=CSY4 PE=1 SV=3)

HSP 1 Score: 208.764 bits (530), Expect = 1.905e-53
Identity = 96/107 (89.72%), Postives = 104/107 (97.20%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEKNCKKAA 323
            CQREFALKHLPDDPLFQLVSKL+EVVPP+LT+LGKVKNPWPNVDAHSGVLLNH+GL EARYYTVLFGVSRSLGICSQLIWDRALGL LERPKSVT+DW+E +CKKA+
Sbjct:  366 CQREFALKHLPDDPLFQLVSKLYEVVPPVLTELGKVKNPWPNVDAHSGVLLNHYGLTEARYYTVLFGVSRSLGICSQLIWDRALGLALERPKSVTMDWLEAHCKKAS 472          
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY_DAUCA (Citrate synthase, mitochondrial OS=Daucus carota GN=CS PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 7.241e-53
Identity = 93/107 (86.92%), Postives = 104/107 (97.20%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEKNCKKAA 323
            CQREFALKHLPDDPLFQLVS LFEVVPPILT+LGKVKNPWPNVDAHSGVLLNH+GL EARYYTVLFGVSR++GICSQL+WDRALGLPLERPKSVT++W+E +CKK++
Sbjct:  366 CQREFALKHLPDDPLFQLVSNLFEVVPPILTELGKVKNPWPNVDAHSGVLLNHYGLTEARYYTVLFGVSRAIGICSQLVWDRALGLPLERPKSVTMEWLENHCKKSS 472          
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY5_ARATH (Citrate synthase 5, mitochondrial OS=Arabidopsis thaliana GN=CSY5 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.393e-50
Identity = 91/100 (91.00%), Postives = 98/100 (98.00%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIE 302
            CQREFALKHLPDDPLFQLVSKL+EVVPPILT+LGKVKNPWPNVDAHSGVLLN++GL EARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSV +DW++
Sbjct:  327 CQREFALKHLPDDPLFQLVSKLYEVVPPILTELGKVKNPWPNVDAHSGVLLNYYGLTEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVNMDWLD 426          
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY_FRAAN (Citrate synthase, mitochondrial OS=Fragaria ananassa GN=MCSI PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 7.493e-50
Identity = 93/107 (86.92%), Postives = 102/107 (95.33%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEKNCKKAA 323
            CQREFALKHLPDDPLF+LVSKL++VVPPILT+LGKVKNPWPNVDAHSGVLLNHFGL EARY+TVLFGVSRS+GI SQLIWDRALGLPLERPKSVT++ +E  CKKAA
Sbjct:  362 CQREFALKHLPDDPLFRLVSKLYDVVPPILTELGKVKNPWPNVDAHSGVLLNHFGLTEARYFTVLFGVSRSIGIGSQLIWDRALGLPLERPKSVTMESLESFCKKAA 468          
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY_SOLTU (Citrate synthase, mitochondrial OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 7.257e-45
Identity = 85/106 (80.19%), Postives = 95/106 (89.62%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEKNCKKA 320
            CQREFA+KHLP+DPLFQLVSKL+EV    L  L K+K PWPNVDAHSGVLLN++GL EARYYTVLFGVSR+LGICSQLIWDRALGLPLERPKSVT++W+E  CKKA
Sbjct:  367 CQREFAMKHLPEDPLFQLVSKLYEVFLLFLQNLAKLK-PWPNVDAHSGVLLNYYGLTEARYYTVLFGVSRALGICSQLIWDRALGLPLERPKSVTMEWLENQCKKA 471          
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY2_AEDAE (Probable citrate synthase 2, mitochondrial OS=Aedes aegypti GN=AAEL011789 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41
Identity = 76/101 (75.25%), Postives = 91/101 (90.10%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEK 305
            CQREFALKHLP+DPLFQLVS +++VVPPILT+LGKVKNPWPNVDAHSGVLL ++GL E  YYTVLFGVSR+LG+ + L+WDRALGLP+ERPKS++ D + K
Sbjct:  361 CQREFALKHLPNDPLFQLVSNIYKVVPPILTELGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLVWDRALGLPIERPKSMSTDGLMK 461          
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY1_AEDAE (Probable citrate synthase 1, mitochondrial OS=Aedes aegypti GN=AAEL002956 PE=3 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41
Identity = 76/101 (75.25%), Postives = 91/101 (90.10%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEK 305
            CQREFALKHLP+DPLFQLVS +++VVPPILT+LGKVKNPWPNVDAHSGVLL ++GL E  YYTVLFGVSR+LG+ + L+WDRALGLP+ERPKS++ D + K
Sbjct:  361 CQREFALKHLPNDPLFQLVSNIYKVVPPILTELGKVKNPWPNVDAHSGVLLQYYGLKEMNYYTVLFGVSRALGVLASLVWDRALGLPIERPKSMSTDGLMK 461          
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY_GLOMM (Probable citrate synthase, mitochondrial OS=Glossina morsitans morsitans PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.029e-40
Identity = 74/105 (70.48%), Postives = 91/105 (86.67%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEKNCKK 317
            CQREFALKHLP+D LFQLVSK+++VVPPIL + GKVKNPWPNVDAHSGVLL ++G+ E  YYTVLFGVSR+LG+ + L+WDRALGLP+ERPKS++ D + K  +K
Sbjct:  361 CQREFALKHLPNDELFQLVSKIYKVVPPILQETGKVKNPWPNVDAHSGVLLQYYGMKEMNYYTVLFGVSRALGVLASLVWDRALGLPIERPKSLSTDLLMKMVQK 465          
BLAST of CK940093 vs. ExPASy Swiss-Prot
Match: CISY_DROME (Probable citrate synthase, mitochondrial OS=Drosophila melanogaster GN=kdn PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 7.029e-40
Identity = 74/105 (70.48%), Postives = 90/105 (85.71%), Query Frame = 3
Query:    3 CQREFALKHLPDDPLFQLVSKLFEVVPPILTKLGKVKNPWPNVDAHSGVLLNHFGLAEARYYTVLFGVSRSLGICSQLIWDRALGLPLERPKSVTLDWIEKNCKK 317
            CQREFALKHLP+D  FQLVSK+++VVPPILT+ GKVKNPWPNVDAHSGVLL ++G+ E  YYTVLFGVSR+LG+ + L+WDRALGLP+ERPKS + D + K  +K
Sbjct:  360 CQREFALKHLPEDETFQLVSKIYKVVPPILTETGKVKNPWPNVDAHSGVLLQYYGMKEMNYYTVLFGVSRALGVLASLVWDRALGLPIERPKSFSTDLLVKMVQK 464          
The following BLAST results are available for this feature:
BLAST of CK940093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
CISY_CITMA7.476e-5899.07Citrate synthase, mitochondrial OS=Citrus maxima G... [more]
CISY4_ARATH1.905e-5389.72Citrate synthase 4, mitochondrial OS=Arabidopsis t... [more]
CISY_DAUCA7.241e-5386.92Citrate synthase, mitochondrial OS=Daucus carota G... [more]
CISY5_ARATH4.393e-5091.00Citrate synthase 5, mitochondrial OS=Arabidopsis t... [more]
CISY_FRAAN7.493e-5086.92Citrate synthase, mitochondrial OS=Fragaria ananas... [more]
CISY_SOLTU7.257e-4580.19Citrate synthase, mitochondrial OS=Solanum tuberos... [more]
CISY2_AEDAE2.185e-4175.25Probable citrate synthase 2, mitochondrial OS=Aede... [more]
CISY1_AEDAE2.185e-4175.25Probable citrate synthase 1, mitochondrial OS=Aede... [more]
CISY_GLOMM7.029e-4070.48Probable citrate synthase, mitochondrial OS=Glossi... [more]
CISY_DROME7.029e-4070.48Probable citrate synthase, mitochondrial OS=Drosop... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004741_F04 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IF_F04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK940093 ID=CK940093; Name=CK940093; organism=Citrus sinensis; type=EST; length=629bp
CTTGTCAGAGGGAGTTTGCCTTGAAGCATTTGCCTGATGATCCATTGTTC
CAGCTGGTTTCTAAGCTGTTTGAAGTGGTGCCCCCAATATTAACAAAACT
AGGCAAGGTTAAAAACCCCTGGCCAAATGTTGATGCTCACAGTGGGGTGC
TGCTGAACCATTTTGGCTTGGCTGAGGCAAGATATTATACTGTTCTTTTT
GGAGTATCAAGGAGTCTTGGAATCTGCTCTCAGTTGATATGGGACCGAGC
TCTTGGGCTGCCACTTGAGAGGCCAAAAAGTGTAACTTTAGATTGGATTG
AGAAAAATTGCAAGAAAGCAGCTTAGAATTGGAAAGGGTGGGTGTATAAA
TTTTTTCTTCGGTAATAATTGCTCAAGAAGCAAGGGAATTAGTGATGGAT
GGAGAGTTTGTGTAGAATTGCGAGGCCATTTGATTACTGCAGGCATTTTA
ACTTTCTTATCTTTATGATTTTCTTATTCAGCAATTTGATTTAACACAGA
TTTTGGCTGTTTTGTTTTGAATACATATGATTTAGAACCATATTGAGTCA
GTTGAATAAAGTAATGATTGGTTACAAAATGGCCAACAATTTCTACTGCC
AAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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