CK940083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_BART1 (30S ribosomal protein S9 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rpsI PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 2.006e-39 Identity = 82/144 (56.94%), Postives = 104/144 (72.22%), Query Frame = 3 Query: 48 QKQEEVVKARVRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 + E VV V+++D +GRAY TG+RK ++ARVWI+PG GK I+N+KEFD YF R L +P T +D+ TV GGG+SGQ GA+R GIS+AL +EP+LRP L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 18 EPHENVVPVHVQKLDSQGRAYATGKRKDAVARVWIKPGSGKIIINNKEFDKYFARPVLRMILRQPIVATNRDTQFDIVATVAGGGLSGQAGAIRHGISKALTYYEPELRPILKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 161
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_RHOP2 (30S ribosomal protein S9 OS=Rhodopseudomonas palustris (strain HaA2) GN=rpsI PE=3 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 6.452e-38 Identity = 80/133 (60.15%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 81 RQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 ++VD+ GRAY TG+RK ++ARVWI+PG GK IVN +E +VYF R + +P G +DV CTV GGG+SGQ GAVR GIS+AL N+EP+LR L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 26 KKVDKFGRAYATGKRKDAVARVWIKPGAGKVIVNSREVEVYFARPVLRMMIQQPLVAAARAGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_BRUAB (30S ribosomal protein S9 OS=Brucella abortus GN=rpsI PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.101e-37 Identity = 79/143 (55.24%), Postives = 101/143 (70.63%), Query Frame = 3 Query: 51 KQEEVVKARVRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 K E V+++D +GRAY TG+RK ++ARVW++PG GK VNDKEF+ YF + L +P + G +D+ TV GGG+SGQ GAVR GIS+AL ++EP LR L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 16 KTEAAAPVHVQKLDAQGRAYATGKRKDAVARVWVKPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGGGLSGQAGAVRHGISKALTDYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_BRUA2 (30S ribosomal protein S9 OS=Brucella abortus (strain 2308) GN=rpsI PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.101e-37 Identity = 79/143 (55.24%), Postives = 101/143 (70.63%), Query Frame = 3 Query: 51 KQEEVVKARVRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 K E V+++D +GRAY TG+RK ++ARVW++PG GK VNDKEF+ YF + L +P + G +D+ TV GGG+SGQ GAVR GIS+AL ++EP LR L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 16 KTEAAAPVHVQKLDAQGRAYATGKRKDAVARVWVKPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGGGLSGQAGAVRHGISKALTDYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_BRUA1 (30S ribosomal protein S9 OS=Brucella abortus (strain S19) GN=rpsI PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.101e-37 Identity = 79/143 (55.24%), Postives = 101/143 (70.63%), Query Frame = 3 Query: 51 KQEEVVKARVRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 K E V+++D +GRAY TG+RK ++ARVW++PG GK VNDKEF+ YF + L +P + G +D+ TV GGG+SGQ GAVR GIS+AL ++EP LR L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 16 KTEAAAPVHVQKLDAQGRAYATGKRKDAVARVWVKPGTGKITVNDKEFEKYFARPVLQMILQQPIVASNRAGQFDIVATVAGGGLSGQAGAVRHGISKALTDYEPGLRTVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_RHOPS (30S ribosomal protein S9 OS=Rhodopseudomonas palustris (strain BisB5) GN=rpsI PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.437e-37 Identity = 79/133 (59.40%), Postives = 99/133 (74.44%), Query Frame = 3 Query: 81 RQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 ++VD++GRAY TG+RK ++ARVWI+PG GK VN +E +VYF R + +P G +DV CTV GGG+SGQ GAVR GIS+AL N+EP+LR L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 26 KKVDKQGRAYATGKRKDAVARVWIKPGAGKVTVNAREVEVYFARPVLRMMIQQPLVAAARAGQYDVICTVAGGGLSGQAGAVRHGISKALTNFEPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_AZOC5 (30S ribosomal protein S9 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rpsI PE=3 SV=1) HSP 1 Score: 156.762 bits (395), Expect = 1.437e-37 Identity = 78/134 (58.21%), Postives = 101/134 (75.37%), Query Frame = 3 Query: 78 VRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 V+++D+ GRAY TG+RK ++ARVW++PG GK IVND+ +VYF R + +PF+ G +DV CTV GGG+SGQ GA+R GISRAL +EP+LR L+ GFLTRDSRVVERKK G+AKAR+SFQ+ KR Sbjct: 21 VQKLDKFGRAYATGKRKDAVARVWVRPGTGKIIVNDRPVEVYFARPVLRLIINQPFAAAAREGAYDVVCTVSGGGLSGQAGALRHGISRALTFYEPELRGPLKKGGFLTRDSRVVERKKYGRAKARRSFQFSKR 154
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_NITWN (30S ribosomal protein S9 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpsI PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.877e-37 Identity = 79/141 (56.03%), Postives = 100/141 (70.92%), Query Frame = 3 Query: 57 EEVVKARVRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 E ++VD+ GRAY TG+RK ++ARVWI+PG GK +VN +E DVYF R + +P G +DV CTV GGG+SGQ GAVR G+S+AL ++EP+LR L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 18 ESEAPKHTKKVDKYGRAYATGKRKDAVARVWIKPGAGKILVNAREVDVYFARPVLRMMIQQPLVAAARAGQYDVVCTVAGGGLSGQAGAVRHGLSKALTHFEPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_NITHX (30S ribosomal protein S9 OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=rpsI PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.877e-37 Identity = 78/141 (55.32%), Postives = 100/141 (70.92%), Query Frame = 3 Query: 57 EEVVKARVRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 E +++D+ GRAY TG+RK ++ARVWI+PG GK +VN +E +VYF R + +P G +DV CTV GGG+SGQ GAVR G+S+AL N+EP+LR L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 18 ESEAPKHTKKIDKYGRAYATGKRKDAVARVWIKPGAGKILVNAREVEVYFARPVLRMMIQQPLVAAARAGQYDVVCTVAGGGLSGQAGAVRHGLSKALTNFEPELRGVLKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 158
BLAST of CK940083 vs. ExPASy Swiss-Prot
Match: RS9_BARHE (30S ribosomal protein S9 OS=Bartonella henselae GN=rpsI PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 1.877e-37 Identity = 79/144 (54.86%), Postives = 101/144 (70.14%), Query Frame = 3 Query: 48 QKQEEVVKARVRQVDEKGRAYGTGRRKCSIARVWIQPGDGKFIVNDKEFDVYFPMLDHRAALLRPFSETKTLGLWDVDCTVKGGGVSGQVGAVRLGISRALQNWEPDLRPALRSAGFLTRDSRVVERKKPGKAKARKSFQWVKR 479 + E + V+++D +GRAY TG+RK ++ARVWI+PG GK +N+KEFD YF R L +P T +D+ TV GGG+SGQ GAVR GIS+AL +EP+LR L+ GFLTRDSRVVERKK GKAKAR+SFQ+ KR Sbjct: 18 ETHENIAPVHVQKLDSQGRAYATGKRKDAVARVWIKPGSGKITINNKEFDKYFARPVLRMILRQPIVATNRDTQFDIIATVAGGGLSGQAGAVRHGISKALTYYEPELRTILKKGGFLTRDSRVVERKKYGKAKARRSFQFSKR 161 The following BLAST results are available for this feature:
BLAST of CK940083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK940083 ID=CK940083; Name=CK940083; organism=Citrus sinensis; type=EST; length=845bpback to top |