CK940080

Overview
NameCK940080
Unique NameCK940080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length198
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_CITSI (Maturase K OS=Citrus sinensis GN=matK PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 3.143e-33
Identity = 63/66 (95.45%), Postives = 65/66 (98.48%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLSGVR 198
            HYVRY+GKS+LASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHL LGKYAINFLGYLSGVR
Sbjct:  275 HYVRYQGKSILASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLYLGKYAINFLGYLSGVR 340          
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_KOEPA (Maturase K OS=Koelreuteria paniculata GN=matK PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.412e-25
Identity = 51/63 (80.95%), Postives = 55/63 (87.30%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLS 189
            HYVRY GK++LASKDTPLLMNKWKYYLV LWQWHFH  SQPGRV +NHL   KY+INFLGYLS
Sbjct:  275 HYVRYRGKAILASKDTPLLMNKWKYYLVNLWQWHFHVWSQPGRVHINHLH--KYSINFLGYLS 335          
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_ACEPM (Maturase K OS=Acer palmatum GN=matK PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.729e-23
Identity = 50/63 (79.37%), Postives = 53/63 (84.13%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLS 189
            HYVRY+GKSVLASKD PLLMNKWKYYLV LWQWHFH  SQPGR+ +NH  L K  INFLGYLS
Sbjct:  277 HYVRYQGKSVLASKDMPLLMNKWKYYLVNLWQWHFHVWSQPGRIHINH--LYKDYINFLGYLS 337          
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_SAPSA (Maturase K OS=Sapindus saponaria GN=matK PE=3 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 3.852e-23
Identity = 49/66 (74.24%), Postives = 54/66 (81.82%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLSGVR 198
            HYVRY+GK++LASKDTPLLMNKWK Y V LWQWHFH  SQPGRV +NHL   K +INFLGYLS  R
Sbjct:  275 HYVRYQGKAILASKDTPLLMNKWKNYFVNLWQWHFHVWSQPGRVHINHLH--KDSINFLGYLSSRR 338          
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_OENPA (Maturase K OS=Oenothera parviflora GN=matK PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.570e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLSGVR 198
            HYVRY+GKS+LASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N   LGKY+++FLGY S V+
Sbjct:  278 HYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININ--QLGKYSLDFLGYFSNVQ 341          
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_OENGL (Maturase K OS=Oenothera glazioviana GN=matK PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.570e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLSGVR 198
            HYVRY+GKS+LASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N   LGKY+++FLGY S V+
Sbjct:  278 HYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININ--QLGKYSLDFLGYFSNVQ 341          
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_OENEH (Maturase K OS=Oenothera elata subsp. hookeri GN=matK PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.570e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLSGVR 198
            HYVRY+GKS+LASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N   LGKY+++FLGY S V+
Sbjct:  278 HYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININ--QLGKYSLDFLGYFSNVQ 341          
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_OENBI (Maturase K OS=Oenothera biennis GN=matK PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.570e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLSGVR 198
            HYVRY+GKS+LASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N   LGKY+++FLGY S V+
Sbjct:  278 HYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININ--QLGKYSLDFLGYFSNVQ 341          
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_OENAR (Maturase K OS=Oenothera argillicola GN=matK PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.570e-23
Identity = 47/66 (71.21%), Postives = 56/66 (84.85%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLSGVR 198
            HYVRY+GKS+LASKDTPLLMNKWKYYLV LWQ+HF   SQPGR+ +N   LGKY+++FLGY S V+
Sbjct:  278 HYVRYQGKSILASKDTPLLMNKWKYYLVNLWQYHFSVWSQPGRININ--QLGKYSLDFLGYFSNVQ 341          
BLAST of CK940080 vs. ExPASy Swiss-Prot
Match: MATK_ACEPL (Maturase K OS=Acer platanoides GN=matK PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 6.570e-23
Identity = 49/63 (77.78%), Postives = 53/63 (84.13%), Query Frame = 1
Query:    1 HYVRYEGKSVLASKDTPLLMNKWKYYLVGLWQWHFHASSQPGRVQLNHLDLGKYAINFLGYLS 189
            HYVRY+GKSVLASKD PLLMNKWKYYLV LWQWHFH  SQPGR+ +NH  L K  I+FLGYLS
Sbjct:  275 HYVRYQGKSVLASKDMPLLMNKWKYYLVNLWQWHFHVWSQPGRIHINH--LYKDYIDFLGYLS 335          
The following BLAST results are available for this feature:
BLAST of CK940080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MATK_CITSI3.143e-3395.45Maturase K OS=Citrus sinensis GN=matK PE=3 SV=1[more]
MATK_KOEPA2.412e-2580.95Maturase K OS=Koelreuteria paniculata GN=matK PE=3... [more]
MATK_ACEPM1.729e-2379.37Maturase K OS=Acer palmatum GN=matK PE=3 SV=1[more]
MATK_SAPSA3.852e-2374.24Maturase K OS=Sapindus saponaria GN=matK PE=3 SV=2[more]
MATK_OENPA6.570e-2371.21Maturase K OS=Oenothera parviflora GN=matK PE=3 SV... [more]
MATK_OENGL6.570e-2371.21Maturase K OS=Oenothera glazioviana GN=matK PE=3 S... [more]
MATK_OENEH6.570e-2371.21Maturase K OS=Oenothera elata subsp. hookeri GN=ma... [more]
MATK_OENBI6.570e-2371.21Maturase K OS=Oenothera biennis GN=matK PE=3 SV=1[more]
MATK_OENAR6.570e-2371.21Maturase K OS=Oenothera argillicola GN=matK PE=3 S... [more]
MATK_ACEPL6.570e-2377.78Maturase K OS=Acer platanoides GN=matK PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCGF1004741_H06 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650003_IF_H06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK940080 ID=CK940080; Name=CK940080; organism=Citrus sinensis; type=EST; length=198bp
CATTATGTTAGATATGAAGGAAAATCCGTTTTGGCTTCTAAGGATACGCC
TCTTCTGATGAATAAATGGAAATATTACCTTGTCGGTTTATGGCAATGGC
ATTTTCACGCGTCTTCTCAACCAGGAAGGGTTCAGCTAAACCACTTAGAC
TTAGGGAAGTACGCTATTAACTTTCTGGGCTATCTTTCCGGTGTGCGC
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