CN188516

Overview
NameCN188516
Unique NameCN188516
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length714
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP5_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 5 OS=Arabidopsis thaliana GN=SAP5 PE=1 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.460e-34
Identity = 81/153 (52.94%), Postives = 94/153 (61.44%), Query Frame = -3
Query:  266 NPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXAIIKFSSEK-SLRSRP---IIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 712
            NPATNNMCQKCFN                         +I+K S+   +LRS P   +IR    DA     Q                ++VNRCSGCR+KVGLTGFRCRCGELFC EHRYSDRHDCSYDYK+AGR+AIARENPV+KAAK+V+V
Sbjct:   35 NPATNNMCQKCFN-----------ASLVSAAAGVVESGSILKRSARSVNLRSSPAKVVIRPREIDAVKKRDQ----------------QIVNRCSGCRKKVGLTGFRCRCGELFCSEHRYSDRHDCSYDYKTAGREAIARENPVVKAAKMVKV 160          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP11_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 11 OS=Oryza sativa subsp. japonica GN=SAP11 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.151e-29
Identity = 71/155 (45.81%), Postives = 81/155 (52.26%), Query Frame = -3
Query:  269 NPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRV-------VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 712
            NPATNN+CQ CF                          +     S  SL   P++         +      L   R     VE          VNRC  CRR+VGLTGFRCRCGEL+CG HRYSDRHDCS+DYKSA RDAIARENPV++AAKIVR
Sbjct:   31 NPATNNLCQNCF----------------LAASASSSSSSAAASPSTTSLPVFPVVEKPRQAVQSSAAAAVALVVERPTAGPVESSSKASRSSSVNRCHSCRRRVGLTGFRCRCGELYCGAHRYSDRHDCSFDYKSAARDAIARENPVVRAAKIVR 169          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. japonica GN=SAP1 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.197e-28
Identity = 73/157 (46.50%), Postives = 84/157 (53.50%), Query Frame = -3
Query:  269 NPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANV---------EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 712
            NPAT N+CQ CF                          A    SS  SL S  + +     AA        L    E+ A+          +   VNRCS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct:   31 NPATQNLCQNCF------------------------LAATASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP1_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 1 OS=Oryza sativa subsp. indica GN=SAP1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.197e-28
Identity = 73/157 (46.50%), Postives = 84/157 (53.50%), Query Frame = -3
Query:  269 NPATNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANV---------EKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVR 712
            NPAT N+CQ CF                          A    SS  SL S  + +     AA        L    E+ A+          +   VNRCS CR++VGLTGFRCRCG LFCGEHRYSDRH CSYDYKSA RDAIAR+NPV++AAKIVR
Sbjct:   31 NPATQNLCQNCF------------------------LAATASTSSPSSLSSPVLDKQPPRPAAPLVEPQAPLPPPVEEMASALATAPAPVAKTSAVNRCSRCRKRVGLTGFRCRCGHLFCGEHRYSDRHGCSYDYKSAARDAIARDNPVVRAAKIVR 163          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP15_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 15 OS=Oryza sativa subsp. japonica GN=SAP15 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 5.756e-23
Identity = 44/63 (69.84%), Postives = 57/63 (90.48%), Query Frame = -3
Query:  266 VNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 454
            VNRC+ CR++VGLTGFRCRCGELFC  HR+S+ H+CS+DYK+AGR+ IAR NPVI+AAKI+++
Sbjct:  112 VNRCNVCRKRVGLTGFRCRCGELFCPRHRHSETHECSFDYKTAGREEIARANPVIRAAKIIKI 174          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP6_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Oryza sativa subsp. japonica GN=SAP6 PE=2 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.086e-21
Identity = 50/146 (34.25%), Postives = 75/146 (51.37%), Query Frame = -3
Query:  266 TNNMCQKCFNXXXXXXXXXXXXXXXXXXXXXXXXXAIIKFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 703
            T NMC KC+                           +++     SL S P++   +   +G+    +++      E +  K   NRC  CR+KVGLTGF+CRCG  FC  HRY+D H C++DYK  GR+ IA++NP++KA KI ++
Sbjct:   36 TENMCSKCYRDTVKAKTVAT----------------VVEKKPLASLSSTPLVTEVTDGGSGSVADGKQVM-----EEDTPKPPSNRCLSCRKKVGLTGFKCRCGGTFCSMHRYADSHKCTFDYKQVGREQIAKQNPLVKADKITKI 160          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSJ (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. japonica GN=SAP8 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = -3
Query:  266 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 451
            NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA K+ ++
Sbjct:  110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP8_ORYSI (Zinc finger A20 and AN1 domain-containing stress-associated protein 8 OS=Oryza sativa subsp. indica GN=SAP8 PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 3.158e-21
Identity = 40/62 (64.52%), Postives = 52/62 (83.87%), Query Frame = -3
Query:  266 NRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 451
            NRCS CR++VGLTGF CRCG L+C  HRYSD+HDC +DY++A RDAIA+ NPV+KA K+ ++
Sbjct:  110 NRCSTCRKRVGLTGFNCRCGNLYCAMHRYSDKHDCQFDYRTAARDAIAKANPVVKAEKLDKI 171          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: ZFAN5_MOUSE (AN1-type zinc finger protein 5 OS=Mus musculus GN=Zfand5 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.036e-21
Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = -3
Query:  266 KFSSEKSLRSRPIIRSGSSDAAGTTGQNQELTDRREKEANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 589
            K ++ K+  S P++   S   +  +    E     EK   + K   NRC  CR+KVGLTGF CRCG LFCG HRYSD+H+C YDYK+     I +ENPV+ A KI R+
Sbjct:  111 KITTPKTEVSEPVVTQPSPSVSQPSSSQSE-----EKAPELPKPKKNRCFMCRKKVGLTGFDCRCGNLFCGLHRYSDKHNCPYDYKAEAAAKIRKENPVVVAEKIQRI 213          
BLAST of CN188516 vs. ExPASy Swiss-Prot
Match: SAP6_ARATH (Zinc finger A20 and AN1 domain-containing stress-associated protein 6 OS=Arabidopsis thaliana GN=SAP6 PE=2 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 9.190e-21
Identity = 42/71 (59.15%), Postives = 58/71 (81.69%), Query Frame = -3
Query:  266 EANVEKRVVNRCSGCRRKVGLTGFRCRCGELFCGEHRYSDRHDCSYDYKSAGRDAIARENPVIKAAKIVRV 478
            E N ++R  NRC+ CR++VGLTGF+CRCG +FCG HRY + H CSYD+KSAGR+ IA+ NP++KAAK+ ++
Sbjct:  101 EQNQQQRP-NRCTTCRKRVGLTGFKCRCGTMFCGVHRYPEIHGCSYDFKSAGREEIAKANPLVKAAKLQKI 170          
The following BLAST results are available for this feature:
BLAST of CN188516 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 34
Match NameE-valueIdentityDescription
SAP5_ARATH1.460e-3452.94Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP11_ORYSJ3.151e-2945.81Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSJ1.197e-2846.50Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP1_ORYSI1.197e-2846.50Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP15_ORYSJ5.756e-2369.84Zinc finger AN1 domain-containing stress-associate... [more]
SAP6_ORYSJ1.086e-2134.25Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSJ3.158e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
SAP8_ORYSI3.158e-2164.52Zinc finger A20 and AN1 domain-containing stress-a... [more]
ZFAN5_MOUSE7.036e-2145.37AN1-type zinc finger protein 5 OS=Mus musculus GN=... [more]
SAP6_ARATH9.190e-2159.15Zinc finger A20 and AN1 domain-containing stress-a... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006D06_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006D06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188516 ID=CN188516; Name=CN188516; organism=Citrus sinensis; type=EST; length=714bp
TTTTTTTTTTTTTTTTTAACCTAAAACCACAATAATCCTCTTTCTATTTC
TGAAGAAACAAACCTCTAGAAAAGAAAGAAAATTATAAATTATCGAAAGA
GAAACAATTCATAAATCTGATCAACTCTCTCTCTAAAACCCTCTTTCGAT
CCTTTGATCACCATATTCCTGAGGAAGAGATCTGGCGAAATGACATCGTT
TCATGATGTGTATAAATTGATCTGAATTTTTGACCTTTCAATCGTGTTTT
CAAATTAAGCTTTCAAACTCTAACGATCTTGGCAGCTTTGATCACCGGAT
TTTCTCTCGCGATGGCGTCGCGACCGGCCGATTTATAATCATAGCTGCAA
TCGTGACGATCGGAGTACCGATGTTCGCCGCAGAACAGCTCCCCGCAGCG
ACATCTAAATCCGGTCAATCCAACCTTTCGTCGACAACCGGAGCACCGAT
TCACAACTCGTTTCTCTACGTTGGCTTCCTTCTCTCGCCGATCCGTCAAC
TCCTGATTTTGACCGGTCGTACCGGCAGCATCGGATGACCCAGACCGGAT
GATAGGCCGAGATCTCAAAGATTTCTCGCTAGAAAACTTTATGATCGCTA
CACCGCTTCCTCCGCCGCCGCCGCCGCCCGTACTCGAACCAGCAACGGCG
CTTGCGGTGGTGGTAGCGGTTGCGTTGAAACATTTCTGGCACATATTATT
TGTGGCTGGATTTC
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