CN188509
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188509 vs. ExPASy Swiss-Prot
Match: SYP22_ARATH (Syntaxin-22 OS=Arabidopsis thaliana GN=SYP22 PE=1 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 5.548e-70 Identity = 146/230 (63.48%), Postives = 167/230 (72.61%), Query Frame = 3 Query: 78 MSFQDLEAGRPVSSLRRNLVNGKQDSTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQ 767 MSFQDLE+GR S+ + N G+QDSTQAVASGIFQINT VSTFQRLVNTLGTPKDTPELREK+HKTRLHIGQLVKDTSAKLK+ASETDH + V+ FQAVLKEFQKAQ+ AAERET YTPFVPQ+ LPSSYTA E+ D+ EQ A L ES+RQE+VLLD VNE+FKDLAVLV++QG +IDDIG+HI+NS+ Sbjct: 1 MSFQDLESGRGRSTRKFN--GGRQDSTQAVASGIFQINTGVSTFQRLVNTLGTPKDTPELREKLHKTRLHIGQLVKDTSAKLKEASETDHQSGVNPSKKIADAKLARDFQAVLKEFQKAQQTAAERETTYTPFVPQSALPSSYTAGEV----DKVPEQRAQLQESKRQELVLLDNEIAFNEAVIEEREQGIQEIHQQIGEVNEIFKDLAVLVNDQGVMIDDIGTHIDNSR 224
BLAST of CN188509 vs. ExPASy Swiss-Prot
Match: SYP23_ARATH (Syntaxin-23 OS=Arabidopsis thaliana GN=SYP23 PE=2 SV=1) HSP 1 Score: 263.077 bits (671), Expect = 1.236e-69 Identity = 143/232 (61.64%), Postives = 165/232 (71.12%), Query Frame = 3 Query: 78 MSFQDLEAGRPVSSLRRNLVNG---KQDSTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENS 764 MSFQDLEAGR S +NG +QD+TQ VASGIFQINT+VSTF RLVNTLGTPKDTPELREK+HKTRL+IGQLVKDTSAKLK+ASETDH V+ FQAVLKEFQKAQRLAAERET Y P V + LPSSYT+ E+D++ D+ EQ ALLVES+RQE+VLLD V+E+FKDLAVLVH+QG +IDDIG+HI+NS Sbjct: 1 MSFQDLEAGRGRSLASSRNINGGGSRQDTTQDVASGIFQINTSVSTFHRLVNTLGTPKDTPELREKLHKTRLYIGQLVKDTSAKLKEASETDHQRGVNQKKKIVDAKLAKDFQAVLKEFQKAQRLAAERETVYAPLVHKPSLPSSYTSSEIDVNGDKHPEQRALLVESKRQELVLLDNEIAFNEAVIEEREQGIQEIQQQIGEVHEIFKDLAVLVHDQGNMIDDIGTHIDNS 232
BLAST of CN188509 vs. ExPASy Swiss-Prot
Match: SYP21_ARATH (Syntaxin-21 OS=Arabidopsis thaliana GN=SYP21 PE=1 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.589e-51 Identity = 119/236 (50.42%), Postives = 150/236 (63.56%), Query Frame = 3 Query: 78 MSFQDLEAGRPVSSLRRNLVNGKQ-------DSTQAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENS 764 MSFQDLEAG + R G+Q D +Q VA+GIF+I+TAV++F RLVN++GTPKDT ELR+K+ KTRL I +LVK+TSAKLK+ASE D H S FQ+VLKEFQKAQRLAAERE YTP V + + P+SY A ELD S R ++Q ALL++SRRQEVV LD VN +FKDLA++V+ QG I+DDI S+++NS Sbjct: 1 MSFQDLEAGTRSPAPNR-FTGGRQQRPSSRGDPSQEVAAGIFRISTAVNSFFRLVNSIGTPKDTLELRDKLQKTRLQISELVKNTSAKLKEASEADLHGSASQIKKIADAKLAKDFQSVLKEFQKAQRLAAEREITYTPVVTKEI-PTSYNAPELDTESLRISQQQALLLQSRRQEVVFLDNEITFNEAIIEEREQGIREIEDQIRDVNGMFKDLALMVNHQGNIVDDISSNLDNS 234
BLAST of CN188509 vs. ExPASy Swiss-Prot
Match: SYP24_ARATH (Putative syntaxin-24 OS=Arabidopsis thaliana GN=SYP24 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.022e-28 Identity = 77/164 (46.95%), Postives = 94/164 (57.32%), Query Frame = 3 Query: 270 HKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLLDXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIEN 761 HK L IGQLVKDTSA L++ASETDH V+ F+A LKEFQKAQ + ERET+Y PF P+ S+++ E+DI DRS EQ +L+ESRRQE+VLLD V E+FKDLAV+V QGT IDDI I+N Sbjct: 154 HKKMLLIGQLVKDTSANLREASETDHRRDVAQSKKIADAKLAKDFEAALKEFQKAQHITVERETSYIPFDPK----GSFSSSEVDIGYDRSQEQR-VLMESRRQEIVLLDNEISLNEARIEAREQGIQEVKHQISEVMEMFKDLAVMVDHQGT-IDDIDEKIDN 311
BLAST of CN188509 vs. ExPASy Swiss-Prot
Match: STX7_PONAB (Syntaxin-7 OS=Pongo abelii GN=STX7 PE=2 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.585e-16 Identity = 58/206 (28.16%), Postives = 93/206 (45.15%), Query Frame = 3 Query: 159 QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQV 770 Q ++S I +I + QR +N LGTP+D+PELR+++ + + + QL K+T +K+ F L FQK QR AAERE + V + S D S E++ + ES+ Q V + + +NE+FKDL +++HEQG +ID I +++EN++V Sbjct: 16 QRISSNIQKITQCSAEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLTKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVGEFTTSLTNFQKVQRQAAEREKEFVARVRASSRVSG------SFPEDSSKERNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEV 215
BLAST of CN188509 vs. ExPASy Swiss-Prot
Match: STX7_HUMAN (Syntaxin-7 OS=Homo sapiens GN=STX7 PE=1 SV=4) HSP 1 Score: 85.5001 bits (210), Expect = 3.532e-16 Identity = 58/206 (28.16%), Postives = 92/206 (44.66%), Query Frame = 3 Query: 159 QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQV 770 Q ++S I +I QR +N LGTP+D+PELR+++ + + + QL K+T +K+ F L FQK QR AAERE + V + S D S E++ + ES+ Q V + + +NE+FKDL +++HEQG +ID I +++EN++V Sbjct: 16 QRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQQLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKVQRQAAEREKEFVARVRASSRVSG------SFPEDSSKERNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVENAEV 215
BLAST of CN188509 vs. ExPASy Swiss-Prot
Match: STX7_RAT (Syntaxin-7 OS=Rattus norvegicus GN=Stx7 PE=1 SV=4) HSP 1 Score: 85.1149 bits (209), Expect = 4.613e-16 Identity = 58/206 (28.16%), Postives = 93/206 (45.15%), Query Frame = 3 Query: 159 QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQV 770 Q ++S I +I + QR +N LGTP+DTPELR+++ + + + QL K+T +K+ F L FQK QR AAERE + V + S D S E++ + ES+ Q V + + +NE+FKDL +++HEQG +ID I +++E+++V Sbjct: 16 QRISSNIQKITQCSAEIQRTLNQLGTPQDTPELRQQLQQEQQYTNQLAKETDKYIKEFGFLPTTPSEQRQRKIQKDRLVAEFTTALTNFQKVQRQAAEREKEFVARVRASSRVSG------GFPEDSSKEKNFVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDVIDSIEANVESAEV 215
BLAST of CN188509 vs. ExPASy Swiss-Prot
Match: STX7_MOUSE (Syntaxin-7 OS=Mus musculus GN=Stx7 PE=1 SV=3) HSP 1 Score: 82.8037 bits (203), Expect = 2.289e-15 Identity = 58/206 (28.16%), Postives = 92/206 (44.66%), Query Frame = 3 Query: 159 QAVASGIFQINTAVSTFQRLVNTLGTPKDTPELREKIHKTRLHIGQLVKDTSAKLKQASETDHHAQVSXXXXXXXXXXXXXFQAVLKEFQKAQRLAAERETAYTPFVPQAVLPSSYTAHELDISSDRSAEQHALLVESRRQEVVLL--DXXXXXXXXXXXXXXXXXXXXXXXXXXVNEVFKDLAVLVHEQGTIIDDIGSHIENSQV 770 Q ++S I +I QR +N LGTP+D+PELR+ + + + + QL K+T +K+ F L FQKAQR AAERE + V + S D S E++ + ES+ Q V + + +NE+FKDL +++HEQG +ID I +++E+++V Sbjct: 16 QRISSNIQKITQCSVEIQRTLNQLGTPQDSPELRQLLQQKQQYTNQLAKETDKYIKEFGSLPTTPSEQRQRKIQKDRLVAEFTTSLTNFQKAQRQAAEREKEFVARVRASSRVSG------GFPEDSSKEKNLVSWESQTQPQVQVQDEEITEDDLRLIHERESSIRQLEADIMDINEIFKDLGMMIHEQGDMIDSIEANVESAEV 215 The following BLAST results are available for this feature:
BLAST of CN188509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188509 ID=CN188509; Name=CN188509; organism=Citrus sinensis; type=EST; length=771bpback to top |