CX044093
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 110.538 bits (275), Expect = 7.685e-24 Identity = 68/150 (45.33%), Postives = 84/150 (56.00%), Query Frame = -3 Query: 241 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 615 MV AVAV++ + G GT+ FS EG GPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L NITV +G A+F I K IPL G NSVIGR +VVH P + + G VA G IGL Sbjct: 1 MVKAVAVLSSSEGVSGTIFFSQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVHGDPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.004e-23 Identity = 66/150 (44.00%), Postives = 85/150 (56.67%), Query Frame = -3 Query: 241 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLFGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 615 MV AV V++ + G GTV F+ EGSGPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L NITV +G ATF I + IPL G NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVVVLSSSEGVSGTVQFTQEGSGPTTVTGNVSGLRPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVHADPDDLGRGGHELSKATGNAGGRVACGVIGL 150
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC_ZANAE (Superoxide dismutase [Cu-Zn] OS=Zantedeschia aethiopica GN=SODCC PE=2 SV=1) HSP 1 Score: 109.383 bits (272), Expect = 1.712e-23 Identity = 62/129 (48.06%), Postives = 79/129 (61.24%), Query Frame = -3 Query: 265 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLFGTNSVIGRGLVVHSSPSPDPGDG 615 MV AVAV+TG+ G +GTV F+ EG GPTT+ GSLSGL PG H +H G+ +N +STGP F PAG + G L N+TV +G F + + IPL G NSV+GR +VVH+ S D G G Sbjct: 1 MVKAVAVLTGSEGVQGTVFFAQEGEGPTTITGSLSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDGNRHAGDLGNVTVGEDGTVNFTVTDSQIPLTGLNSVVGRAVVVHAD-SDDLGKG 128
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 107.071 bits (266), Expect = 8.497e-23 Identity = 66/150 (44.00%), Postives = 84/150 (56.00%), Query Frame = -3 Query: 241 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLFGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 615 MV AVAV++ +N GT++FS EG+GPTTV G+L+GL PG H IH G+ +N ISTGP F P G + G L NI V +G +F I IPL GTNS+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLSNSNEVSGTINFSQEGNGPTTVTGTLAGLKPGLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC_PAUKA (Superoxide dismutase [Cu-Zn] OS=Paulownia kawakamii GN=SODCC PE=2 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.449e-22 Identity = 59/129 (45.74%), Postives = 77/129 (59.69%), Query Frame = -3 Query: 265 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVHSSPSPDPGDG 615 MV VAV++ + G GT+ F+ EG GPTTV G++SGL PG H +H G+ +N +STGP F PAG + G L N+TV +G A F I K IPL G +S+IGR +VVH+ P D G G Sbjct: 1 MVKGVAVLSSSEGVSGTIYFTQEGDGPTTVTGNVSGLKPGPHGFHVHALGDTTNGCLSTGPHFNPAGKEHGAPDDEVRHAGDLGNVTVGEDGTAAFTIVDKQIPLTGPHSIIGRAVVVHADPD-DLGKG 128
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22 Identity = 64/150 (42.67%), Postives = 83/150 (55.33%), Query Frame = -3 Query: 241 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLFGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 615 MV AVAV+ + G KGT+ F+ EG GPTTV GS+SGL PG H +H G+ +N +STGP F PAG + G L N+TV +G I + IPL G+NS+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLGSSEGVKGTIYFTQEGDGPTTVTGSISGLKPGLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC2_ORYSJ (Superoxide dismutase [Cu-Zn] 2 OS=Oryza sativa subsp. japonica GN=SODCC2 PE=1 SV=2) HSP 1 Score: 103.99 bits (258), Expect = 7.193e-22 Identity = 62/150 (41.33%), Postives = 83/150 (55.33%), Query Frame = -3 Query: 241 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLFGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 615 MV AVAV+ + G KGT+ FS EG GPT+V GS+SGL PG H +H G+ +N +STGP F P G + G L NIT ++G+A + + IPL G +S+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLASSEGVKGTIFFSQEGDGPTSVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHFNPTGKEHGAPQDENRHAGDLGNITAGADGVANVNVSDSQIPLTGAHSIIGRAVVVHADPDDLGKGGHELSKTTGNAGGRVACGIIGL 150
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC4_MAIZE (Superoxide dismutase [Cu-Zn] 4A OS=Zea mays GN=SODCC.3 PE=2 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.227e-21 Identity = 61/150 (40.67%), Postives = 83/150 (55.33%), Query Frame = -3 Query: 241 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLFGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 615 MV AVAV+ + G KGT+ F+ EG GPTTV GS+SGL PG H +H G+ +N +STGP + PA + G L N+T ++G+A + + IPL G NS+IGR +VVH+ P + + G VA G IGL Sbjct: 1 MVKAVAVLGSSEGVKGTIFFTQEGDGPTTVTGSVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPASKEHGAPEDENRHAGDLGNVTAGADGVANINVTDSQIPLTGPNSIIGRAVVVHADPDDLGKGGHELSKSTGNAGGRVACGIIGL 150
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC2_SOLLC (Superoxide dismutase [Cu-Zn] 2 OS=Solanum lycopersicum GN=SODCC.5 PE=3 SV=3) HSP 1 Score: 102.449 bits (254), Expect = 2.093e-21 Identity = 58/129 (44.96%), Postives = 77/129 (59.69%), Query Frame = -3 Query: 265 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIY-KTIPLFGTNSVIGRGLVVHSSPSPDPGDG 615 MV AVAV+ + G GT+ F+ +G+ PTTV G++SGL PG H +H G+ +N +STGP + PAG + G L NITV +G A+F I K IPL G S+IGR +VVH+ P D G G Sbjct: 1 MVKAVAVLNSSEGVSGTILFTQDGAAPTTVNGNISGLKPGLHGFHVHALGDTTNGCMSTGPHYNPAGKEHGAPEDEVRHAGDLGNITVGEDGTASFTITDKQIPLTGPQSIIGRAVVVHADPD-DLGKG 128
BLAST of CX044093 vs. ExPASy Swiss-Prot
Match: SODC_SPIOL (Superoxide dismutase [Cu-Zn] OS=Spinacia oleracea GN=SODCC PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.570e-21 Identity = 62/150 (41.33%), Postives = 82/150 (54.67%), Query Frame = -3 Query: 241 MVNAVAVITGTNGRKGTVSFSVEGSGPTTVKGSLSGLPPGDHALIIHTYGNISNDWISTGPPFKPAGAD-----------GFLENITVTSEGIATFEIYKT-IPLFGTNSVIGRGLVVHSSP-------------SPDPGDGVAWGTIGL 615 M AV V++ + G GTV F+ EG GPTTV G++SGL PG H +H G+ +N +STGP + P G + G L NITV +G ATF I + IPL G NS++GR +VVH+ P + + G VA G IGL Sbjct: 1 MGKAVVVLSSSEGVSGTVYFAQEGDGPTTVTGNVSGLKPGLHGFHVHALGDTTNGCMSTGPHYNPNGKEHGAPEDDVRHAGDLGNITVGDDGTATFTIIDSQIPLSGPNSIVGRAVVVHAEPDDLGRGGHELSKTTGNAGGRVACGIIGL 150 The following BLAST results are available for this feature:
BLAST of CX044093 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CX044093 ID=CX044093; Name=CX044093; organism=Citrus sinensis; type=EST; length=659bpback to top |