CN188493

Overview
NameCN188493
Unique NameCN188493
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13608 contig Csv1_Contig13608:606..1342. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH_POPDE (Probable cinnamyl alcohol dehydrogenase OS=Populus deltoides PE=2 SV=2)

HSP 1 Score: 264.233 bits (674), Expect = 5.118e-70
Identity = 138/188 (73.40%), Postives = 147/188 (78.19%), Query Frame = -1
Query:  174 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 737
            V+SPL HFGLKQS                  IAKAMGHHVTVISSSDKKR EAMEHLGAD+YLVSSD   MQ+AAD LDYIIDTVP  HPLEPY           L GVIN P+QF+TPMVMLGRK+ITGSFIGSMKET+EMLEFC+EKGV SMIEVIKMDY+N AFERLEKNDVRYRFVVDVAGSKL
Sbjct:  168 VYSPLKHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEAMEHLGADEYLVSSDVESMQKAADQLDYIIDTVPVVHPLEPYLSLLKLDGKLILMGVINAPLQFVTPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGVASMIEVIKMDYINTAFERLEKNDVRYRFVVDVAGSKL 355          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH1_ARACO (Probable cinnamyl alcohol dehydrogenase 1 OS=Aralia cordata GN=CAD1 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.489e-69
Identity = 136/190 (71.58%), Postives = 152/190 (80.00%), Query Frame = -1
Query:  171 VFSPLSHFGLKQ-SXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPL+HFGLK+ S                  +AKAMGHHVTVISSSDKK+ EA++HLGAD YLVSSDAT+MQEAADSLDYIIDTVP  HPLEPY           L GVINTP+QF++PMVMLGRKAITGSFIGSMKET+EML+FC EKG+TS IEV+KMDY+N AFERLEKNDVRYRFVVDVAGSKLD
Sbjct:  168 VYSPLTHFGLKEISGLRGGILGLGGVGHMGVKLAKAMGHHVTVISSSDKKKEEAIDHLGADAYLVSSDATQMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFISPMVMLGRKAITGSFIGSMKETEEMLDFCNEKGITSTIEVVKMDYINTAFERLEKNDVRYRFVVDVAGSKLD 357          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH1_TOBAC (Probable cinnamyl alcohol dehydrogenase 1 OS=Nicotiana tabacum GN=CAD14 PE=1 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.390e-69
Identity = 132/189 (69.84%), Postives = 148/189 (78.31%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPL+HFG KQS                  IAKAMGHHVTVISSS+KKR EA+EHLGAD YLVSSD  +MQEA+DSLDYIIDTVP  HPLEPY           L GVINTP+QF++PMVMLGRK+ITGSFIGSMKET+EML+FC+EKGVTS IE++KMDY+N A ERLEKNDVRYRFVVDV GSKLD
Sbjct:  168 VYSPLNHFGFKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEASDSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVRYRFVVDVIGSKLD 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH1_OCIBA (Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilicum GN=CAD1 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 9.652e-69
Identity = 133/188 (70.74%), Postives = 148/188 (78.72%), Query Frame = -1
Query:  174 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKL 737
            V+SPL+HFGLKQS                  IAKAMGHHVTVISSSDKKR EA++HLGAD YLVSSDA RMQEAADSLDYIIDTVP  HPLEPY           L GV+NTP+QF++PMVMLGRK+ITGSFIGSMKE  EMLEFC+EK ++S IE++KMDY+N AFERLEKNDVRYRFVVDVAGSKL
Sbjct:  168 VYSPLNHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRAEALDHLGADDYLVSSDAARMQEAADSLDYIIDTVPVFHPLEPYLSLLKIDGKLILMGVVNTPLQFVSPMVMLGRKSITGSFIGSMKELAEMLEFCKEKDLSSTIEIVKMDYINTAFERLEKNDVRYRFVVDVAGSKL 355          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH_EUCBO (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus botryoides GN=CAD1 PE=3 SV=1)

HSP 1 Score: 256.914 bits (655), Expect = 8.171e-68
Identity = 134/189 (70.90%), Postives = 145/189 (76.72%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPL  FGLKQS                  IAKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDYI DT+P  HPLEPY           LTGVIN P+QF++PMVMLGRK+ITGSFIGSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDVAGSKLD
Sbjct:  167 VYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVAGSKLD 355          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH_EUCGL (Probable cinnamyl alcohol dehydrogenase OS=Eucalyptus globulus GN=CAD PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.377e-67
Identity = 133/189 (70.37%), Postives = 144/189 (76.19%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPL  FGLKQS                  IAKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDYI DT+P  HPLEPY           LTGVIN P+QF++PMVMLGRK+ITGSFIGSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDV GSKLD
Sbjct:  168 VYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKLD 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH2_EUCGU (Probable cinnamyl alcohol dehydrogenase 2 OS=Eucalyptus gunnii GN=CAD2 PE=2 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 2.377e-67
Identity = 133/189 (70.37%), Postives = 144/189 (76.19%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPL  FGLKQS                  IAKAMGHHVTVISSSDKKR EA+EHLGAD YLVSSD   M+EA DSLDYI DT+P  HPLEPY           LTGVIN P+QF++PMVMLGRK+ITGSFIGSMKET+EMLEFC+EKG+TS IEVIKMDYVN A ERLEKNDVRYRFVVDV GSKLD
Sbjct:  168 VYSPLVRFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKRTEALEHLGADAYLVSSDENGMKEATDSLDYIFDTIPVVHPLEPYLALLKLDGKLILTGVINAPLQFISPMVMLGRKSITGSFIGSMKETEEMLEFCKEKGLTSQIEVIKMDYVNTALERLEKNDVRYRFVVDVVGSKLD 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH2_TOBAC (Probable cinnamyl alcohol dehydrogenase 2 OS=Nicotiana tabacum GN=CAD19 PE=1 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 6.917e-67
Identity = 130/189 (68.78%), Postives = 145/189 (76.72%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SP +HFG  QS                  IAKAMGHHVTVISSS+KKR EA+EHLGAD YLVSSD  +MQEAADSLDYIIDTVP  HPLE Y           L GVINTP+QF++PMVMLGRK+ITGSFIGSMKET+EML+FC+EKGVTS IE++KMDY+N A ERLEKNDV YRFVVDVAGSKLD
Sbjct:  168 VYSPFNHFGFNQSGFRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKRQEALEHLGADDYLVSSDTDKMQEAADSLDYIIDTVPVGHPLELYLSLLKIDGKLILIGVINTPLQFISPMVMLGRKSITGSFIGSMKETEEMLDFCKEKGVTSQIEIVKMDYINTAMERLEKNDVSYRFVVDVAGSKLD 356          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH_MEDSA (Probable cinnamyl alcohol dehydrogenase OS=Medicago sativa GN=CAD2 PE=1 SV=1)

HSP 1 Score: 251.136 bits (640), Expect = 4.484e-66
Identity = 128/189 (67.72%), Postives = 145/189 (76.72%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPLSHFGLK                    +AKA+GHHVTVISSSDKK+ EA+E LGAD YLVSSD   MQEAADSLDYIIDTVP  HPLEPY           L GVINTP+QF+TPMVMLGRK+ITGSF+GS+KET+EMLEF +EKG+TSMIE++ MDY+NKAFERLEKNDVRYRFVVDV GSK +
Sbjct:  169 VYSPLSHFGLKTPGLRGGILGLGGVGHMGVKVAKALGHHVTVISSSDKKKKEALEDLGADNYLVSSDTVGMQEAADSLDYIIDTVPVGHPLEPYLSLLKIDGKLILMGVINTPLQFVTPMVMLGRKSITGSFVGSVKETEEMLEFWKEKGLTSMIEIVTMDYINKAFERLEKNDVRYRFVVDVKGSKFE 357          
BLAST of CN188493 vs. ExPASy Swiss-Prot
Match: CADH5_ARATH (Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis thaliana GN=CAD5 PE=1 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.460e-64
Identity = 125/189 (66.14%), Postives = 143/189 (75.66%), Query Frame = -1
Query:  171 VFSPLSHFGLKQSXXXXXXXXXXXXXXXXXXIAKAMGHHVTVISSSDKKRVEAMEHLGADQYLVSSDATRMQEAADSLDYIIDTVPANHPLEPYXXXXXXXXXXXLTGVINTPMQFLTPMVMLGRKAITGSFIGSMKETKEMLEFCREKGVTSMIEVIKMDYVNKAFERLEKNDVRYRFVVDVAGSKLD 737
            V+SPLSHFGLKQ                   IAKAMGHHVTVISSS+KKR EA++ LGAD Y++ SD  +M E ADSLDY+IDTVP +H LEPY           L GVIN P+QFLTP++MLGRK ITGSFIGSMKET+EMLEFC+EKG++S+IEV+KMDYVN AFERLEKNDVRYRFVVDV GS LD
Sbjct:  168 VYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSNLD 356          
The following BLAST results are available for this feature:
BLAST of CN188493 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
CADH_POPDE5.118e-7073.40Probable cinnamyl alcohol dehydrogenase OS=Populus... [more]
CADH1_ARACO1.489e-6971.58Probable cinnamyl alcohol dehydrogenase 1 OS=Arali... [more]
CADH1_TOBAC7.390e-6969.84Probable cinnamyl alcohol dehydrogenase 1 OS=Nicot... [more]
CADH1_OCIBA9.652e-6970.74Cinnamyl alcohol dehydrogenase 1 OS=Ocimum basilic... [more]
CADH_EUCBO8.171e-6870.90Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH_EUCGL2.377e-6770.37Probable cinnamyl alcohol dehydrogenase OS=Eucalyp... [more]
CADH2_EUCGU2.377e-6770.37Probable cinnamyl alcohol dehydrogenase 2 OS=Eucal... [more]
CADH2_TOBAC6.917e-6768.78Probable cinnamyl alcohol dehydrogenase 2 OS=Nicot... [more]
CADH_MEDSA4.484e-6667.72Probable cinnamyl alcohol dehydrogenase OS=Medicag... [more]
CADH5_ARATH2.460e-6466.14Cinnamyl alcohol dehydrogenase 5 OS=Arabidopsis th... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0006C12_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0006C12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188493 ID=CN188493; Name=CN188493; organism=Citrus sinensis; type=EST; length=737bp
TTTTTTTTTTTTTTTAACACCTCAGCTTGTTTTTTTTTTTTTTCAATTTA
TTAGGAGAAATTGTAAACACGGAAGCCATACATGGTTAGGCCAACGACAA
AAGCATAAAAACCAAACAAGGCACTCAAAAAACAAAACGAGTATCATGCC
AAAATTGAATTTCTCTACGGATCAAGTTTGCTTCCGGCAACGTCCACGAC
GAATCTGTACCTAACGTCGTTCTTTTCGAGTCTCTCGAATGCTTTGTTAA
CGTAATCCATCTTGATCACTTCAATCATGGAGGTGACTCCCTTCTCTCGG
CAGAATTCAAGCATTTCCTTTGTCTCCTTCATGCTCCCAATGAAGCTCCC
CGTGATTGCCTTTCTCCCAAGCATAACCATAGGGGTAAGAAACTGCATGG
GAGTGTTAATGACACCCGTCAAGATCAACTTTCCATCAAGCTTCAACAGC
GAAAGGTAAGGCTCCAGAGGGTGATTTGCGGGTACGGTATCAATGATATA
ATCAAGTGAGTCAGCGGCTTCTTGCATACGAGTTGCGTCGGAGCTGACAA
GGTACTGATCGGCACCAAGATGCTCCATAGCTTCCACTCTTTTCTTATCA
GAAGAGCTAATCACAGTAACATGGTGTCCCATCGCCTTAGCTATCAAAAC
CCCCATGTGGCCTACTCCTCCGAGCCCCAAGATTCCTCCTCTCAGCCCGC
TCTGCTTCAATCCAAAGTGGCTCAGGGGACTGAACAC
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