CX675776

Overview
NameCX675776
Unique NameCX675776
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length728
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: ANTR4_ARATH (Probable anion transporter 4, chloroplastic OS=Arabidopsis thaliana GN=ANTR4 PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.114e-69
Identity = 128/187 (68.45%), Postives = 150/187 (80.21%), Query Frame = -1
Query:  168 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVELVXXXXXXXXXXXXXXXXXXXXXXXXXTGERVNFD 728
            VAN+MHSWGFFVILSWMPIYFN VYH++L+QA+WFSAVPWS+MAFTGY+ G  SD+LI+RGTS+TLTRKI+QSIGFI PGIALIGLT AK P++ASAWL+LA+G+KSFSH GFL+NLQEIAP+Y GVLHG+  TAGT AAI+GTVGAGFFVEL+                         TGERV+FD
Sbjct:  344 VANSMHSWGFFVILSWMPIYFNSVYHVNLKQAAWFSAVPWSMMAFTGYIAGFWSDLLIRRGTSITLTRKIMQSIGFIGPGIALIGLTTAKQPLVASAWLSLAVGLKSFSHLGFLINLQEIAPEYSGVLHGMCLTAGTLAAIVGTVGAGFFVELLGSFQGFILLTAILYLLSALFYNIYATGERVDFD 530          
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: PHT43_ORYSJ (Probable anion transporter 3, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;3 PE=2 SV=1)

HSP 1 Score: 259.225 bits (661), Expect = 1.609e-68
Identity = 123/189 (65.08%), Postives = 149/189 (78.84%), Query Frame = -1
Query:  159 ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVELVXXXXXXXXXXXXXXXXXXXXXXXXXTGERVNFDEAG 725
            ANAMHSWG+FVILSWMP+YF  +YH++LR+A+WFSA+PW +MA  GY+ G++SD LIQ GTS+TLTRKI+Q+IGF+ PG+AL+GL AAKSPV+ASAWLT+A+G+KSF HSGFLVNLQEIAPQY GVLHG+SNTAGTFAAILGTVGAGFFV+ +                         TGERV+FD  G
Sbjct:  331 ANAMHSWGYFVILSWMPVYFKTIYHVNLREAAWFSALPWVMMAVLGYVAGVVSDRLIQNGTSITLTRKIMQTIGFVGPGVALLGLNAAKSPVIASAWLTIAVGLKSFGHSGFLVNLQEIAPQYAGVLHGMSNTAGTFAAILGTVGAGFFVDRMGSFRGFLILTSLLYFSSTLFWDIFATGERVDFDGTG 519          
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: ANTR3_ARATH (Probable anion transporter 3, chloroplastic OS=Arabidopsis thaliana GN=ANTR3 PE=2 SV=2)

HSP 1 Score: 194.897 bits (494), Expect = 3.726e-49
Identity = 86/151 (56.95%), Postives = 120/151 (79.47%), Query Frame = -1
Query:  273 ANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVE 725
            AN  ++WG+FV+LSWMP+YF  V++++L+QA+WFSA+PW+ MA +GY  G  SD LI+ G SVT  RKI+QSIGF+ PG++L+ L  AKSP  A+ ++T+A+ + SFS +GFL+N+Q+IAPQY G LHGISN AGT AAI+ T+G G+FV+
Sbjct:  329 ANVTNNWGYFVLLSWMPVYFQTVFNVNLKQAAWFSALPWATMAISGYYAGAASDFLIRTGHSVTSVRKIMQSIGFMGPGLSLLCLNFAKSPSCAAVFMTIALSLSSFSQAGFLLNMQDIAPQYAGFLHGISNCAGTLAAIVSTIGTGYFVQ 479          
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: PHT42_ORYSJ (Probable anion transporter 2, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;2 PE=2 SV=1)

HSP 1 Score: 188.348 bits (477), Expect = 3.487e-47
Identity = 81/152 (53.29%), Postives = 121/152 (79.61%), Query Frame = -1
Query:  273 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVE 728
            VAN +++WG+FV+LSWMP+YF  VY+++L+QA+WFSA+PW+VMA +GY+ G  +D LI+ G SV L RKI+QSIGFI PG++L+ L  A++P +A+  +T+A+ + SFS +G+  N+Q+IAP+Y G LHG++N  GT AAI+ T+G G+FV+
Sbjct:  350 VANVVNNWGYFVLLSWMPVYFKTVYNVNLKQAAWFSAIPWAVMALSGYVAGASADFLIKSGFSVALVRKIMQSIGFIGPGVSLLCLRFAQTPSVAAVLMTIALSLSSFSQAGYFCNVQDIAPKYAGSLHGLTNGIGTVAAIVSTIGTGYFVQ 501          
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: PHT41_ORYSJ (Probable anion transporter 1, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;1 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.169e-32
Identity = 65/152 (42.76%), Postives = 93/152 (61.18%), Query Frame = -1
Query:  273 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVE 728
            V++  H+WG F++L+WMP Y+N V   +L ++  F  +PW  MA +   GG ++D L+ RG SVT  RKI+QSIGF+ P   L  L+   SP MA   +  + G  +FS SG   N Q+I P+Y GVL G+SNTAG  A + GT   G+ ++
Sbjct:  345 VSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLFCVLPWLTMAVSANFGGWIADTLVSRGLSVTTVRKIMQSIGFLGPAFFLTQLSHIDSPAMAVLCMACSQGTDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 496          
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: PHT44_ORYSJ (Probable anion transporter 4, chloroplastic OS=Oryza sativa subsp. japonica GN=PHT4;4 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31
Identity = 62/152 (40.79%), Postives = 94/152 (61.84%), Query Frame = -1
Query:  273 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVE 728
            V++  H+WG F++L+WMP Y+N V   +L ++     +PW  MA    +GG ++D L+ RG S+T  RKI+QSIGF+ P + L  L+  ++P MA   +  + G  +FS SG   N Q+I P+Y GVL G+SNTAG  A + GT   G+ ++
Sbjct:  407 VSHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAIFANIGGWIADTLVGRGVSITNVRKIMQSIGFLGPALFLTLLSKVRTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 558          
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: ANTR2_ARATH (Probable anion transporter 2, chloroplastic OS=Arabidopsis thaliana GN=ANTR2 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31
Identity = 62/152 (40.79%), Postives = 93/152 (61.18%), Query Frame = -1
Query:  273 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVE 728
            +++  H+WG F++L+WMP Y+N V   +L ++     +PW  MA    +GG ++D L+ RG S+T  RKI+QSIGF+ P   L  L+  K+P MA   +  + G  +FS SG   N Q+I P+Y GVL G+SNTAG  A + GT   G+ ++
Sbjct:  357 ISHFCHNWGTFILLTWMPTYYNQVLKFNLTESGLLCVLPWLTMAVFANIGGWIADTLVSRGLSITNVRKIMQSIGFLGPAFFLSQLSHVKTPAMAVLCMACSQGSDAFSQSGLYSNHQDIGPRYAGVLLGLSNTAGVLAGVFGTAATGYILQ 508          
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: ANTR1_ARATH (Sodium-dependent phosphate transport protein 1, chloroplastic OS=Arabidopsis thaliana GN=ANTR1 PE=1 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.331e-30
Identity = 64/147 (43.54%), Postives = 89/147 (60.54%), Query Frame = -1
Query:  273 HSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGTSVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVE 713
            H+WG F++L+WMP Y++ V   +L ++   S  PW  MA +   GG ++D L+ RG SVT  RKI+Q+IGF+ P   L  L    SP MA   +  + G  +FS SG   N Q+IAP+Y GVL G+SNTAG  A +LGT   G  ++
Sbjct:  333 HNWGTFILLTWMPTYYHQVLKFNLMESGLLSVFPWMTMAISANAGGWIADTLVSRGFSVTNVRKIMQTIGFLGPAFFLTQLKHIDSPTMAVLCMACSQGTDAFSQSGLYSNHQDIAPRYSGVLLGLSNTAGVLAGVLGTAATGHILQ 479          
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: PHT46_ORYSJ (Probable anion transporter 6 OS=Oryza sativa subsp. japonica GN=PHT4;6 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.322e-21
Identity = 53/153 (34.64%), Postives = 88/153 (57.52%), Query Frame = -1
Query:  273 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVE 728
            V N    +  +V+++W+P YF     + L+   +   +P+  M     +GG+L+D LI R   SVT TRK+L ++GF+   IAL+ L   ++P  A    ++++G  +   +GF VN  ++AP++ G++ GISNTAGT A I+G    G  +E
Sbjct:  232 VNNFTFHYALYVLMNWLPTYFKLGLQLSLQDMGFSKMLPYLNMFLFSNIGGVLADHLITRKILSVTKTRKLLNTVGFVVSAIALMALPLFRTPSGAIFCSSVSLGFLALGRAGFAVNHMDVAPKFAGIVMGISNTAGTLAGIVGVGLTGRILE 384          
BLAST of CX675776 vs. ExPASy Swiss-Prot
Match: PHT47_ORYSJ (Probable anion transporter 7 OS=Oryza sativa subsp. japonica GN=PHT4;7 PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.057e-19
Identity = 49/153 (32.03%), Postives = 86/153 (56.21%), Query Frame = -1
Query:  273 VANAMHSWGFFVILSWMPIYFNFVYHIDLRQASWFSAVPWSVMAFTGYLGGLLSDMLIQRGT-SVTLTRKILQSIGFIAPGIALIGLTAAKSPVMASAWLTLAIGMKSFSHSGFLVNLQEIAPQYFGVLHGISNTAGTFAAILGTVGAGFFVE 728
            V N    +  +V+++W+P YF     + L+       +P+  M     +GG+++D LI R   S+T TRK+L +IGF+   +AL+ L   ++P       ++++G  +   +GF VN  ++AP++ G++ G+SNTAGT A I+G    G  +E
Sbjct:  243 VNNFTFHYALYVLMNWLPTYFELGLQLSLQDMGSSKMLPYFNMFIFSNIGGVVADHLITRRILSITKTRKLLNTIGFVVSAVALMALPLFRTPSGTVLCSSISLGFLALGRAGFAVNHMDVAPKFAGIVMGVSNTAGTLAGIVGVGLTGSILE 395          
The following BLAST results are available for this feature:
BLAST of CX675776 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 46
Match NameE-valueIdentityDescription
ANTR4_ARATH1.114e-6968.45Probable anion transporter 4, chloroplastic OS=Ara... [more]
PHT43_ORYSJ1.609e-6865.08Probable anion transporter 3, chloroplastic OS=Ory... [more]
ANTR3_ARATH3.726e-4956.95Probable anion transporter 3, chloroplastic OS=Ara... [more]
PHT42_ORYSJ3.487e-4753.29Probable anion transporter 2, chloroplastic OS=Ory... [more]
PHT41_ORYSJ3.169e-3242.76Probable anion transporter 1, chloroplastic OS=Ory... [more]
PHT44_ORYSJ2.683e-3140.79Probable anion transporter 4, chloroplastic OS=Ory... [more]
ANTR2_ARATH2.683e-3140.79Probable anion transporter 2, chloroplastic OS=Ara... [more]
ANTR1_ARATH1.331e-3043.54Sodium-dependent phosphate transport protein 1, ch... [more]
PHT46_ORYSJ7.322e-2134.64Probable anion transporter 6 OS=Oryza sativa subsp... [more]
PHT47_ORYSJ1.057e-1932.03Probable anion transporter 7 OS=Oryza sativa subsp... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_64G06_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64G06-M12-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675776 ID=CX675776; Name=CX675776; organism=Citrus sinensis; type=EST; length=728bp
TTTTTTTTTTTTTTTTTATGTAATTATAATTTTTTGTTCAGCATGTTGCT
CAAATACCAAATGACATCTTAATAGCCTTGCTAACCTCCGATAAAATCTG
ATAAAACAAAAACCAAGCTACAGAAAAAAGAAAGAAATCATTGTAATAAA
AAAAACTCACCAGCTTCATCAAAATTCACTCTCTCTCCTGTAAAAAAGAT
GATGTAAAAAAGGGCAAAAAGGAAATATAAAAGCGATGTGAGTAACAAAA
ACCCTTGGAAAGAGCCCACAAGCTCCACAAAAAAACCAGCTCCAACTGTT
CCTAAAATGGCAGCAAATGTTCCGGCAGTATTTGAGATTCCGTGTAAAAC
ACCAAAATATTGGGGAGCAATCTCCTGAAGATTCACAAGAAAACCCGAGT
GACTGAAAGATTTCATTCCAATGGCTAAAGTCAGCCATGCAGACGCCATT
ACTGGACTTTTTGCTGCAGTTAACCCAATAAGTGCAATTCCCGGTGCGAT
AAAACCAATTGACTGCAAGATCTTGCGAGTCAAAGTCACACTTGTGCCCC
TCTGTATCAACATGTCTGACAATAAACCACCCAAGTATCCTGTAAATGCC
ATAACACTCCAAGGAACAGCACTAAACCATGATGCTTGTCTCAGGTCAAT
ATGATATACAAAGTTGAAGTAGATTGGCATCCACGAAAGAATAACAAAAA
AACCCCAACTATGCATGGCATTTGCAAC
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