CX675758

Overview
NameCX675758
Unique NameCX675758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length392
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CX675758 vs. ExPASy Swiss-Prot
Match: RS241_ARATH (40S ribosomal protein S24-1 OS=Arabidopsis thaliana GN=RPS24A PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 2.926e-15
Identity = 38/41 (92.68%), Postives = 41/41 (100.00%), Query Frame = 1 
Query:    1 DSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGV 123
            +SAKKFEPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIRGV
Sbjct:   82 ESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRGV 122
[Close]
BLAST of CX675758 vs. ExPASy Swiss-Prot
Match: RS242_ARATH (40S ribosomal protein S24-2 OS=Arabidopsis thaliana GN=RPS24B PE=2 SV=2)

HSP 1 Score: 79.337 bits (194), Expect = 6.519e-15
Identity = 37/41 (90.24%), Postives = 41/41 (100.00%), Query Frame = 1 
Query:    1 DSAKKFEPKYRLIRNGLDTKVEKSRKQMKERKNRAKKIRGV 123
            ++AKKFEPKYRLIRNGLDTK+EKSRKQ+KERKNRAKKIRGV
Sbjct:   82 ENAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIRGV 122
The following BLAST results are available for this feature:
BLAST of CX675758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RS241_ARATH2.926e-1592.6840S ribosomal protein S24-1 OS=Arabidopsis thalian... [more]
RS242_ARATH6.519e-1590.2440S ribosomal protein S24-2 OS=Arabidopsis thalian... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_64F04_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64F04-K8-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675758 ID=CX675758; Name=CX675758; organism=Citrus sinensis; type=EST; length=392bp
GACAGTGCTAAGAAGTTTGAGCCCAAGTACAGGCTTATCAGGAATGGACT
TGATACCAAGGTAGAGAAGTCAAGGAAGCAGATGAAGGAAAGGAAGAACA
GGGCTAAGAAGATCCGTGGTGTAAAGAAGACCAAGGCCTCAGATGCTGCC
AAGAAGAAGTGAGCAATTGGAGATTCTTCTGTAGTCTCGAAGCCAATTTT
CTGTGATGGAGTTTCTATAATAGTCTTTTTTTTTTTTTGGTTTAGTTCCT
GAAATGAAATCTAGTGTGTTGTGGATTTTGGTGCCATTGGATGTTTAGTT
ATATTTGCAGATTTTGAGTACTCCCCGAAAGACATTTTTGAGTATTGAAT
GGCAATACATTCGACTTTAACCCTGTAAAAAAAAAAAAAAAA
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