CX675753

Overview
NameCX675753
Unique NameCX675753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length696
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675753 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.119e-34
Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 3
Query:    3 DPYQRAQARFWADFLTRRCTILRGRHGPQREKXXXXXXXXXXKF*RPWEGSLETSLFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVTRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 398
            DPY RAQARFWAD++ ++      +    + +          +  +  EG+L    +FGG++FG+VD+ LI YY WFY+YETFG FS EAECPKF+AW  RC+QRE+VAK+LPD+ KV EFV VLR+K  +E
Sbjct:   90 DPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221          
BLAST of CX675753 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.465e-33
Identity = 65/132 (49.24%), Postives = 89/132 (67.42%), Query Frame = 3
Query:    3 DPYQRAQARFWADFLTRRCTILRGRHGPQREKXXXXXXXXXXKF*RPWEGSLETSLFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVTRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 398
            DPY RAQARFWAD++ ++      +    + +          +  +  EG+L    +FGG++FG+VD+ LI +Y WFY+YETFG FS EAECPKF+AW  RC+QRE+VAK+LPD+ KV EFV VLR+K  +E
Sbjct:   90 DPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFSTEAECPKFVAWAKRCMQRESVAKSLPDQPKVLEFVKVLRQKFGLE 221          
BLAST of CX675753 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.842e-26
Identity = 52/129 (40.31%), Postives = 78/129 (60.47%), Query Frame = 3
Query:    3 DPYQRAQARFWADFLTRRCTILRGRHGPQREKXXXXXXXXXXKF*RPWEGSLETSLFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVTRCLQRETVAKALPDEKKVFEFVSVLREKI 389
            DPY+R+QARFWAD++ ++      R    + +          +  +  EG L    +FGGDN G+VD+ L+P+  WFYSYET   FS+EAECPK + W   C++ E+V+K+LP   K++ FV  L+ K+
Sbjct:   89 DPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECPKLVVWAKTCMESESVSKSLPHPHKIYGFVLELKHKL 217          
BLAST of CX675753 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.194e-25
Identity = 52/129 (40.31%), Postives = 78/129 (60.47%), Query Frame = 3
Query:    3 DPYQRAQARFWADFLTRRCTILRGRHGPQREKXXXXXXXXXXKF*RPWEGSLETSLFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVTRCLQRETVAKALPDEKKVFEFVSVLREKI 389
            DPY+R+QARFW D++ ++      +    + +             +  E +L    F+G D FG+VDLCLI +  WFY+YET+G F +E ECPK +AWV RC++RETV+  LPD KKV+  +  L++ +
Sbjct:   88 DPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYGNFKMEEECPKLMAWVKRCMERETVSNTLPDAKKVYGLIVELQKTL 216          
BLAST of CX675753 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.016e-24
Identity = 51/129 (39.53%), Postives = 76/129 (58.91%), Query Frame = 3
Query:    3 DPYQRAQARFWADFLTRRCTILRGRHGPQREKXXXXXXXXXXKF*RPWEGSLETSLFFGGDNFGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVTRCLQRETVAKALPDEKKVFEFVSVLREKI 389
            DPYQR+QARFWA+++  +      R    + +          +  +  EG L    +FGGDN G+VD+ L+P+  WFYSYET   FS+EAEC K + W   C++ E V+K+LP   K+++FV  L+ K+
Sbjct:   89 DPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSIEAECRKLVVW-QNCMENERVSKSLPHPHKIYDFVLELKHKL 216          
BLAST of CX675753 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.495e-20
Identity = 53/133 (39.85%), Postives = 72/133 (54.14%), Query Frame = 3
Query:    9 YQRAQARFWADFLTRRCTILRGRHGPQREKXXXXXXXXXXKF*RPWEGSLETSLFFGGDN---FGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVTRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 398
            Y RA ARFWAD++ R+      R    + +          +  R  E  L    FFGG      G+VD+ L+P+  WFYSYE  G FSVE   P+  AW  RC + ++VAK LP  +KV++FV VL++K  VE
Sbjct:   99 YARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVAKHLPSPEKVYDFVGVLKKKYGVE 231          
BLAST of CX675753 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.181e-19
Identity = 52/133 (39.10%), Postives = 71/133 (53.38%), Query Frame = 3
Query:    9 YQRAQARFWADFLTRRCTILRGRHGPQREKXXXXXXXXXXKF*RPWEGSLETSLFFGGDN---FGYVDLCLIPYYCWFYSYETFGKFSVEAECPKFIAWVTRCLQRETVAKALPDEKKVFEFVSVLREKIRVE 398
            Y RA ARFWAD++ R+      R    + +          +  R  E  L    FFGG      G+VD+ L+P+  WFYSYE  G FSVE   P+  AW  RC + ++V K LP  +KV++FV VL++K  VE
Sbjct:   99 YARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCGGFSVEEVAPRLAAWARRCGRIDSVVKHLPSPEKVYDFVGVLKKKYGVE 231          
The following BLAST results are available for this feature:
BLAST of CX675753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
GSTX4_TOBAC9.119e-3450.00Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC3.465e-3349.24Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTXA_TOBAC1.842e-2640.31Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX3_SOYBN1.194e-2540.31Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTX1_NICPL5.016e-2439.53Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSI7.495e-2039.85Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSJ2.181e-1939.10Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS08_64F02_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-64F02-K4-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675753 ID=CX675753; Name=CX675753; organism=Citrus sinensis; type=EST; length=696bp
ACGATCCTTACCAAAGAGCTCAAGCGAGGTTCTGGGCCGATTTTTTGACA
AGAAGATGTACGATACTTCGAGGAAGACATGGGCCACAAAGGGAGAAGAG
CAGGAGGCAGCAAAGAAGGAGTTCATCGAAGTTCTGAAGACCTTGGGAGG
GGAGCTTGGAGACAAGCCTTTTTTTCGGAGGAGACAACTTTGGGTATGTG
GATTTGTGTTTGATCCCGTACTATTGTTGGTTTTATTCGTATGAGACATT
TGGAAAGTTCAGCGTTGAGGCTGAGTGCCCCAAATTCATTGCTTGGGTGA
CGAGATGCTTGCAGAGAGAGACTGTTGCCAAGGCACTTCCTGATGAGAAA
AAAGTGTTTGAATTTGTTTCAGTGTTGAGGGAAAAAATTAGAGTTGAGTA
AAGGGATATAGCTAGAAGATGAGAAAAGTCAAAGCAGCACAATCGTGCTG
CCTGCTATTCTCAGGTGGTTGATGACTTAAATGTTGGGTTCCGCTTATAA
AACTTGTATTTGTATCGTGCAGGTTTGTTGTAGCGAGTTTAGTTGCATCT
CTCCTTGCATCTCTCCTTGCGACAGATGCTTTGTCATTTTCCCTTCAAAA
TAAACTAGGACAATGAATTTTGTCTATACTGTTTTGTTTTTTTCTTTGGG
AATATTATGTGGCGTCAATCTACCATGCTTTATGAGTTAAAAAAAA
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