CK939831

Overview
NameCK939831
Unique NameCK939831
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length789
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939831 vs. ExPASy Swiss-Prot
Match: MPU1_ARATH (Mannose-P-dolichol utilization defect 1 protein homolog OS=Arabidopsis thaliana GN=At5g59470 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.899e-73
Identity = 128/194 (65.98%), Postives = 160/194 (82.47%), Query Frame = 2
Query:  206 MDYLGINIGCVTGSLRDGKFPEKDCLLPLLSKVLGYLIVALSTTVKLPQILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITYYYSQPVGTATWIRALLYCAIAPTILAGQINPVLFETIYAFQHITFLSARIPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI 787
            MDYLGI++ C  GSLR+G+FP KDCLLPL+SK+LGY +VA S TVKLPQI+KI+ ++S  G+S   FELEV+  TI L Y + K +PFSA+GE+ F+LIQ LILVA  YY+SQP+   TW++A+LY AIAPT+ AG+I+P LFE +YA +H+ FLSARIPQIWKNF+NKSTGQLSFLTCLM+FGGA+ RVFTSI
Sbjct:    1 MDYLGIDLSCAIGSLRNGEFPAKDCLLPLISKLLGYFLVAASMTVKLPQIMKIVDNKSVKGLSVVAFELEVIGYTISLAYCLNKDLPFSAFGELAFLLIQALILVACIYYFSQPLSVTTWVKAILYFAIAPTVFAGKIDPFLFEALYASKHLIFLSARIPQIWKNFRNKSTGQLSFLTCLMNFGGALARVFTSI 194          
BLAST of CK939831 vs. ExPASy Swiss-Prot
Match: MPU1_HUMAN (Mannose-P-dolichol utilization defect 1 protein OS=Homo sapiens GN=MPDU1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.878e-21
Identity = 63/171 (36.84%), Postives = 94/171 (54.97%), Query Frame = 2
Query:  278 CLLPLLSKVLGYLIVALSTTVKLPQILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITYYYSQPVGTATWIRALLYCAIAPTILAGQINPVLFETIYAFQHI-TFLSARIPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI 787
            CL  LLSK LG  IVA S  VKLPQ+ KIL  +SA G+S  +  LE+VA T  + YSI    PFS++GE  F+++Q + +  +  +Y     T   +  L    +   +L   + P+   T+    ++   +  R+ Q   N+ N  TGQLS +T  + FGG++ R+FTSI
Sbjct:   37 CLKILLSKGLGLGIVAGSLLVKLPQVFKILGAKSAEGLSLQSVMLELVALTGTMVYSITNNFPFSSWGEALFLMLQTITICFLVMHYRGQ--TVKGVAFLACYGLVLLVLLSPLTPLTVVTLLQASNVPAVVVGRLLQAATNYHNGHTGQLSAITVFLLFGGSLARIFTSI 205          
BLAST of CK939831 vs. ExPASy Swiss-Prot
Match: MPU1_MOUSE (Mannose-P-dolichol utilization defect 1 protein OS=Mus musculus GN=Mpdu1 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.428e-20
Identity = 62/171 (36.26%), Postives = 94/171 (54.97%), Query Frame = 2
Query:  278 CLLPLLSKVLGYLIVALSTTVKLPQILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITYYYSQPVGTATWIRALLYCAIAPTILAGQINPVLFETIYAFQHI-TFLSARIPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI 787
            CL  LLSK LG  IVA S  VKLPQ+ K+L  +SA G+S  +  LE+VA T  + YSI    PFS++GE  F+ +Q + +  +  +Y     T   +  L   A+    L   + P+   T+    ++   +  ++ Q   N++N  TGQLS +T  M FGG++ R+FTS+
Sbjct:   37 CLKILLSKGLGLGIVAGSLLVKLPQVFKLLGAKSAEGLSLQSVMLELVALTGTVVYSITNNFPFSSWGEALFLTLQTVAICFLVMHYRGE--TVKGVAFLACYAMVLLALLSPLTPLAVVTLLQASNVPAVVVGKLLQAATNYRNGHTGQLSAITVFMLFGGSLARIFTSV 205          
BLAST of CK939831 vs. ExPASy Swiss-Prot
Match: MPU1_CRIGR (Mannose-P-dolichol utilization defect 1 protein OS=Cricetulus griseus GN=MPDU1 PE=2 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.428e-20
Identity = 67/172 (38.95%), Postives = 94/172 (54.65%), Query Frame = 2
Query:  278 CLLPLLSKVLGYLIVALSTTVKLPQILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITYYYSQPVGTATWIRALLYC-AIAPTILAGQINPVLFETIYAFQHI-TFLSARIPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI 787
            CL  LLSK LG  IVA S  VKLPQI KIL  +SA G+S  +  LE+VA T  + YSI    PFS++GE  F+ +Q + +  +  +Y    G      ALL C A     L   + P+   T+    ++   +  ++ Q   N+ N  TGQLS +T  M FGG++ R+FTS+
Sbjct:   37 CLKILLSKGLGLGIVAGSLLVKLPQIFKILGAKSAEGLSLQSVMLELVALTGTVIYSITNNFPFSSWGEALFLTLQTITICLLVLHYR---GDTVKGVALLACYATLLLALLSPLTPLAVVTMLQASNVPAVVVGKLLQAATNYHNGHTGQLSAITVFMLFGGSLARIFTSV 205          
BLAST of CK939831 vs. ExPASy Swiss-Prot
Match: MPU1_DROME (Mannose-P-dolichol utilization defect 1 protein homolog OS=Drosophila melanogaster GN=CG3792 PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 2.694e-19
Identity = 61/177 (34.46%), Postives = 96/177 (54.24%), Query Frame = 2
Query:  263 FPEKDCLLPLLSKVLGYLIVALSTTVKLPQILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITYYYSQPVGTATWIRALLYCAIAPTILAGQINP--VLFETIYAFQHITFLSARIPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI 787
            F +  C   LLSK LG  I+A S  VK+PQ+LKIL  +S  GI+     L+++A +  L Y+   G PFSA+G+  F+ IQ + +  +  +++     +     L+   +   +L   + P  VLF TI +      L  ++ Q + N++  STGQLS  T +M F G++ R+FTSI
Sbjct:   27 FLDVPCFKALLSKGLGLAIIAGSVLVKVPQVLKILNSKSGEGINIVGVVLDLLAISFHLSYNFMHGYPFSAWGDSTFLAIQTVTIAVLVLFFNGRKAQSGLF--LVGYVVLMYVLNSGLTPMSVLF-TIQSCNIPILLVGKLSQAYTNYQAGSTGQLSAATVIMMFAGSVARIFTSI 200          
BLAST of CK939831 vs. ExPASy Swiss-Prot
Match: MPU1_CAEEL (Mannose-P-dolichol utilization defect 1 protein homolog OS=Caenorhabditis elegans GN=F38E1.9 PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.788e-16
Identity = 60/189 (31.75%), Postives = 97/189 (51.32%), Query Frame = 2
Query:  233 CVTGSLRDGKFPEKDCLLPLLSKVLGYLIVALSTTVKLPQILKILKHRSASGISATTFELEVVAATIGLGYSIQKGIPFSAYGEVFFILIQGLILVAITYYYS----QPVGTATWIRALLYCAIAPTILAGQINPVLFETIYAFQHITFLSARIPQIWKNFKNKSTGQLSFLTCLMSFGGAMVRVFTSI 787
            C    L +  F    C   +LS+ LG+ I   S  + +PQILKI   RSA GISA +  L +V A     YS + G  FS +G+ FF+ +Q +I++   + +S      VG    + A+ Y  ++ +I    +  V    I        + +++ QI +N++ +STGQLS ++  + F G + RVFTS+
Sbjct:   13 CFEELLINFNFFHPTCPKAVLSRGLGFAITLGSILLFVPQILKIQAARSAQGISAASQLLALVGAIGTASYSYRSGFVFSGWGDSFFVAVQLVIIILQIFLFSGQTMLSVGFLGIVSAVAYGVVSKSIPMQTLTAVQTAGI-----PIVVVSKLLQISQNYRAQSTGQLSLISVFLQFAGTLARVFTSV 196          
The following BLAST results are available for this feature:
BLAST of CK939831 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
MPU1_ARATH1.899e-7365.98Mannose-P-dolichol utilization defect 1 protein ho... [more]
MPU1_HUMAN2.878e-2136.84Mannose-P-dolichol utilization defect 1 protein OS... [more]
MPU1_MOUSE1.428e-2036.26Mannose-P-dolichol utilization defect 1 protein OS... [more]
MPU1_CRIGR1.428e-2038.95Mannose-P-dolichol utilization defect 1 protein OS... [more]
MPU1_DROME2.694e-1934.46Mannose-P-dolichol utilization defect 1 protein ho... [more]
MPU1_CAEEL2.788e-1631.75Mannose-P-dolichol utilization defect 1 protein ho... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004745_A02 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IF_A02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939831 ID=CK939831; Name=CK939831; organism=Citrus sinensis; type=EST; length=789bp
GGGGAGTGGCGTGAGCATCATTTCTTCTGGAAACTTGAAAGTGGAGTGTG
CTGTCAAAACTTTGGTCCTTTGAAGGCAGTTGCTACTTGCTACTTTGCTA
GTAATAAAATAATACAATATAATATAAACGTTGCTGTAGTTGTTGTTGAA
TTGTAATTGGAATTTGATTGAATTCCATAATTCAAAAGAAAAAAAAGAGG
GGGCCATGGATTATCTAGGGATTAACATTGGCTGCGTGACCGGATCTCTG
CGAGATGGCAAATTTCCAGAGAAAGATTGTTTGCTGCCTCTCCTTTCGAA
GGTCCTCGGCTACTTAATCGTCGCCCTCTCCACTACCGTCAAACTCCCTC
AGATATTGAAAATCTTGAAGCATAGAAGTGCAAGTGGGATTAGCGCCACT
ACCTTCGAGCTTGAAGTAGTTGCGGCTACTATTGGTCTGGGGTATTCTAT
TCAGAAAGGGATTCCCTTTTCAGCTTATGGGGAGGTGTTCTTTATTTTGA
TCCAAGGATTAATTTTAGTTGCTATAACTTACTACTATTCACAACCTGTT
GGTACCGCAACGTGGATCAGGGCACTGCTATATTGTGCTATAGCACCAAC
CATTTTAGCTGGTCAAATTAATCCCGTTCTTTTTGAAACTATATATGCAT
TCCAGCATATCACATTTTTATCTGCCAGGATCCCTCAAATATGGAAGAAC
TTTAAAAACAAAAGTACTGGACAGCTCAGCTTCTTGACATGTCTCATGAG
TTTTGGTGGTGCCATGGTGAGAGTTTTTACAAGCATCCA
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