CK939755

Overview
NameCK939755
Unique NameCK939755
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10459 contig Csv1_Contig10459:1..728. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXPA5_ARATH (Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 SV=1)

HSP 1 Score: 369.392 bits (947), Expect = 1.138e-101
Identity = 168/215 (78.14%), Postives = 188/215 (87.44%), Query Frame = 1
Query:   97 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            G WINAHATFY              YGNLYSQGYG  TAALSTALF+ GLSCGACF++MC NDPQWC++G SI+VTATNFCPPGG CDPPNHHFDLSQP+++ IA Y++GI+PV+YRRVRCKR+GGIRFTINGHSYFNLVL+TNVGGAGDVH+VS+KGSRT+WQ MSRNWGQNWQSNSYLNGQSLSFVVTTS+  SVVS+NVAPP WSFGQTYTG
Sbjct:   36 GPWINAHATFYGGGDASGTMGGACGYGNLYSQGYGLETAALSTALFDQGLSCGACFELMCVNDPQWCIKGRSIVVTATNFCPPGGACDPPNHHFDLSQPIYEKIALYKSGIIPVMYRRVRCKRSGGIRFTINGHSYFNLVLVTNVGGAGDVHSVSMKGSRTKWQLMSRNWGQNWQSNSYLNGQSLSFVVTTSDRRSVVSFNVAPPTWSFGQTYTG 250          
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2)

HSP 1 Score: 362.844 bits (930), Expect = 1.065e-99
Identity = 173/245 (70.61%), Postives = 193/245 (78.78%), Query Frame = 1
Query:   31 KMALWVILCVGFLSLVSSVQGY-GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            KM L  I    F ++V SV GY  GW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C +D  WCL G+IIVTATNFCPP        GGWC+PP HHFDLSQPVFQ IAQY+AG+VPV YRRV C R GGIRFTINGHSYFNLVL+TNVGGAGDVH+V++KGSRTRWQ MSRNWGQNWQSN+ LNGQ+LSF VT S+G +VVS N+AP +WSFGQT+TG
Sbjct:    5 KMGLLGIALFCFAAMVCSVHGYDAGWVNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGAIIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQYKAGVVPVSYRRVPCMRRGGIRFTINGHSYFNLVLVTNVGGAGDVHSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTASDGRTVVSNNIAPASWSFGQTFTG 249          
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 1.391e-99
Identity = 177/246 (71.95%), Postives = 191/246 (77.64%), Query Frame = 1
Query:   34 MALWVILCVGFL-SLVSSVQGY--GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            MAL   L +  L ++ S V GY  GGW+NAHATFY              YGNLYSQGYGTNTAALSTALFNNGLSCGACF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDLSQPVFQ IAQYRAGIVPV YRRV C R GGIRFTINGHSYFNLVLITNVGGAGDVH+  +KGSRT WQ MSRNWGQNWQSNSYLNGQSLSF VTTS+G ++VS NVA   WSFGQT+TG
Sbjct:    1 MALVTFLFIATLGAMTSHVNGYAGGGWVNAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGSIVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQYRAGIVPVAYRRVPCVRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFKVTTSDGQTIVSNNVANAGWSFGQTFTG 246          
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP10_ARATH (Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 5.287e-99
Identity = 173/240 (72.08%), Postives = 193/240 (80.42%), Query Frame = 1
Query:   46 VILCVGFLSLVSSVQGYGG-WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            V++ VG ++  SSV GYGG WINAHATFY              YGNLYSQGYGT+TAALSTALFNNGLSCG+CF+I C ND +WCL GSI+VTATNFCPP        GGWC+PP  HFDL+QPVFQ IAQYRAGIVPV YRRV C+R GGIRFTINGHSYFNLVLITNVGGAGDVH+ +IKGSRT WQ MSRNWGQNWQSNSYLNGQ+LSF VTTS+G +VVS+N AP  WS+GQT+ G
Sbjct:    8 VMIMVGVMA--SSVSGYGGGWINAHATFYGGGDASGTMGGACGYGNLYSQGYGTSTAALSTALFNNGLSCGSCFEIRCENDGKWCLPGSIVVTATNFCPPNNALANNNGGWCNPPLEHFDLAQPVFQRIAQYRAGIVPVSYRRVPCRRRGGIRFTINGHSYFNLVLITNVGGAGDVHSAAIKGSRTVWQAMSRNWGQNWQSNSYLNGQALSFKVTTSDGRTVVSFNAAPAGWSYGQTFAG 245          
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1)

HSP 1 Score: 340.117 bits (871), Expect = 7.395e-93
Identity = 160/240 (66.67%), Postives = 183/240 (76.25%), Query Frame = 1
Query:   46 VILCVGFLSLVSSVQGYG-GWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            + L +  + +  SV GY  GW+NA ATFY              YGNLYSQGYGTNTAALSTALFN G SCGACFQI C +DP+WC+ G+I VT TNFCPP        GGWC+PP HHFDL+QP+F  IAQY+AG+VPV YRRV C+R GGIRFTINGHSYFNLVLITNV GAGDV +VSIKG+ TRWQ MSRNWGQNWQSN+ L+GQ+LSF VTTS+G +V+S N  P NWSFGQTYTG
Sbjct:    9 ISLSLMMMIMWKSVDGYSSGWVNARATFYGGADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQYKAGVVPVQYRRVACRRKGGIRFTINGHSYFNLVLITNVAGAGDVISVSIKGTNTRWQSMSRNWGQNWQSNAKLDGQALSFKVTTSDGRTVISNNATPRNWSFGQTYTG 248          
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSJ (Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.305e-89
Identity = 155/243 (63.79%), Postives = 183/243 (75.31%), Query Frame = 1
Query:   34 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            MA+  +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF VT S+G +V S NVA P W FGQT+ G
Sbjct:    1 MAIAGVLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEG 243          
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXPA4_ORYSI (Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.305e-89
Identity = 155/243 (63.79%), Postives = 183/243 (75.31%), Query Frame = 1
Query:   34 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            MA+  +L + FL+  +S  GYGGW +AHATFY              YGNLYSQGYGTNTAALSTALFN+G +CG+C+++ C N    CL GSI VTATNFCPP        GGWC+PP  HFD+++P F HIAQYRAGIVPV +RRV C + GG+RFT+NGHSYFNLVL+TNV GAGDV +VSIKGSRT WQPMSRNWGQNWQSN++L+GQSLSF VT S+G +V S NVA P W FGQT+ G
Sbjct:    1 MAIAGVLFLLFLARQASAAGYGGWQSAHATFYGGGDASGTMGGACGYGNLYSQGYGTNTAALSTALFNDGAACGSCYELRCDNAGSSCLPGSITVTATNFCPPNYGLPSDDGGWCNPPRPHFDMAEPAFLHIAQYRAGIVPVSFRRVPCVKKGGVRFTVNGHSYFNLVLVTNVAGAGDVRSVSIKGSRTGWQPMSRNWGQNWQSNAFLDGQSLSFQVTASDGRTVTSNNVAHPGWQFGQTFEG 243          
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 2.908e-89
Identity = 157/240 (65.42%), Postives = 180/240 (75.00%), Query Frame = 1
Query:   46 VILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTR-WQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            +I  +  L L  +    GGW   HATFY              YGNLY QGYGTNTAALSTALFNNGL+CGAC+++ C +DP+WCL  +I VTATNFCPP        GGWC+PP  HFDL++P F  IAQYRAGIVPV +RRV C + GGIRFTINGHSYFNLVLI+NVGGAGDVHAVSIKGS+T+ WQ MSRNWGQNWQSNSY+N QSLSF VTTS+G ++VS +VAP NW FGQTY G
Sbjct:   11 IISIISVLFLQGTHGDDGGWQGGHATFYGGEDASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQYRAGIVPVSFRRVPCMKKGGIRFTINGHSYFNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQVTTSDGRTLVSNDVAPSNWQFGQTYQG 250          
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1)

HSP 1 Score: 315.849 bits (808), Expect = 1.494e-85
Identity = 151/245 (61.63%), Postives = 176/245 (71.84%), Query Frame = 1
Query:   34 MALWVILCVGFLSLVSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG--SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            MA+ V+      + +  V   G WINAHATFY              YGNLYSQGYG NTAALSTALFNNGLSCG+CF++ C NDP WCL G  SI++TATNFCPP        GGWC+PP  HFDL+ P+F  IA+Y+AGIVPV YRR+ C++ GGIRFTING  YFNLVL+TNV GAGDV  VS+KGS T+W  +SRNWGQNWQSN+ L GQSLSF V TS+G S  S N+AP NW FGQTY+G
Sbjct:    9 MAVMVVTAFTANAKIPGVYTGGPWINAHATFYGEADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAKYKAGIVPVSYRRIPCRKKGGIRFTINGFKYFNLVLVTNVAGAGDVIKVSVKGSNTQWLDLSRNWGQNWQSNALLVGQSLSFRVKTSDGRSSTSNNIAPSNWQFGQTYSG 253          
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 1.951e-85
Identity = 148/231 (64.07%), Postives = 169/231 (73.16%), Query Frame = 1
Query:   76 VSSVQGYGGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738
            +  +   G W NAHATFY              YGNLYSQGYGTNTAALSTALFNNG+SCGACF++ CANDPQWC  GS  I++TATNFCPP        GGWC+PP  HFDL+ PVF  IAQYRAGIVPV YRRV C++ GGIRFTINGH YFNLVLITNV GAGD+   S+KGSRT W  +SRNWGQNWQSN+ L GQ+LSF VT S+  +  S+N+ P NW FGQT+ G
Sbjct:   22 IPGIYSGGAWQNAHATFYGGSDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQYRAGIVPVSYRRVPCRKRGGIRFTINGHRYFNLVLITNVAGAGDIVRASVKGSRTGWMSLSRNWGQNWQSNAVLVGQALSFRVTGSDRRTSTSWNMVPSNWQFGQTFVG 252          
The following BLAST results are available for this feature:
BLAST of CK939755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 89
Match NameE-valueIdentityDescription
EXPA5_ARATH1.138e-10178.14Expansin-A5 OS=Arabidopsis thaliana GN=EXPA5 PE=2 ... [more]
EXP15_ARATH1.065e-9970.61Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=... [more]
EXPA1_ARATH1.391e-9971.95Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 ... [more]
EXP10_ARATH5.287e-9972.08Expansin-A10 OS=Arabidopsis thaliana GN=EXPA10 PE=... [more]
EXP14_ARATH7.395e-9366.67Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=... [more]
EXPA4_ORYSJ1.305e-8963.79Expansin-A4 OS=Oryza sativa subsp. japonica GN=EXP... [more]
EXPA4_ORYSI1.305e-8963.79Expansin-A4 OS=Oryza sativa subsp. indica GN=EXPA4... [more]
EXPA8_ARATH2.908e-8965.42Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 ... [more]
EXPA9_ARATH1.494e-8561.63Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 ... [more]
EXPA4_ARATH1.951e-8564.07Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004746_B08 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IIF_B08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939755 ID=CK939755; Name=CK939755; organism=Citrus sinensis; type=EST; length=738bp
GGGGAAACAAACTCTCCTTCCAAGGAAAAAAAAATGGCTCTTTGGGTGAT
TCTTTGTGTTGGGTTTCTCTCATTGGTCTCATCCGTTCAAGGTTATGGAG
GTTGGATTAATGCTCATGCAACTTTCTATGGAGGTGGTGATGCTTCTGGC
ACAATGGGGGGCGCTTGTGGGTACGGCAATTTGTACAGCCAAGGTTATGG
TACTAATACCGCAGCACTTAGCACTGCTTTGTTCAACAATGGCCTAAGTT
GTGGAGCTTGCTTTCAAATTATGTGCGCTAATGACCCGCAATGGTGCCTG
CGTGGCTCCATCATTGTCACTGCCACTAACTTTTGCCCTCCTGGAGGCTG
GTGTGATCCTCCTAACCACCACTTTGATCTCTCTCAGCCTGTCTTCCAAC
ACATTGCCCAGTATAGAGCTGGTATTGTTCCTGTAATCTACAGAAGGGTG
AGATGCAAGAGAAATGGGGGCATAAGGTTCACAATCAATGGCCATTCTTA
CTTCAATTTAGTTCTAATAACAAACGTGGGAGGAGCTGGTGACGTGCATG
CTGTATCCATCAAAGGTTCAAGGACTAGATGGCAACCGATGTCGAGAAAC
TGGGGCCAAAACTGGCAAAGCAACTCGTATCTTAATGGACAAAGCCTCTC
TTTTGTTGTGACCACAAGTAATGGCCACAGTGTTGTTTCTTACAATGTTG
CCCCTCCTAATTGGTCATTTGGGCAGACTTATACCGGC
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