CN188347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188347 vs. ExPASy Swiss-Prot
Match: Y3550_ARATH (REF/SRPP-like protein At3g05500 OS=Arabidopsis thaliana GN=At3g05500 PE=2 SV=1) HSP 1 Score: 290.426 bits (742), Expect = 6.567e-78 Identity = 144/210 (68.57%), Postives = 173/210 (82.38%), Query Frame = 1 Query: 100 NMDIEEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVP 729 +M EE++RLKYL+FVQ A + LL F +Y AK KSGPLKPGVESVEG VK VVGPVY+KYH +P+E+LK++D+KVD SVT+LD RVPPV+KQV AQA+SAAQ+AP+VAR++ASEV+ AGV TASGMAKSVY+KYEPAAKELY+ YEPKAEQ AVSAW+KLNQ+PLF +CSEKYN TVV AAEKGY+V+SY+PLVP Sbjct: 13 DMTKEEKERLKYLQFVQAAAVEALLRFALIYAKAKDKSGPLKPGVESVEGAVKTVVGPVYEKYHDVPVEVLKYMDQKVDMSVTELDRRVPPVVKQVSAQAISAAQIAPIVARALASEVRRAGVVETASGMAKSVYSKYEPAAKELYANYEPKAEQCAVSAWKKLNQLPLFPRLAQVAVPTAAFCSEKYNDTVVKAAEKGYRVTSYMPLVP 222
BLAST of CN188347 vs. ExPASy Swiss-Prot
Match: SRP_VITRI (Stress-related protein OS=Vitis riparia GN=SRP PE=2 SV=1) HSP 1 Score: 243.432 bits (620), Expect = 9.206e-64 Identity = 119/205 (58.05%), Postives = 154/205 (75.12%), Query Frame = 1 Query: 115 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVP 729 EE+RLKYL+FVQVA I+V++CF +LY YAK SGPLKPGV++VEGTVK V+GPVY+K++ +P ELL F+DRKV+ S+ +L+ VP ++K+ QA++ AQ AP +A +VASEV+ GV TA + K+VY+K EP AKEL SKYEP AEQYAVSAWR LN++PLF Y SEKYNQ+V AE+GY V+ YLPL+P Sbjct: 16 EEKRLKYLDFVQVAAIYVIVCFSSLYEYAKENSGPLKPGVQTVEGTVKTVIGPVYEKFYDVPFELLMFVDRKVEASIYELERHVPSLVKRASCQAITVAQKAPELALAVASEVQRPGVVDTAKNITKNVYSKCEPTAKELCSKYEPVAEQYAVSAWRSLNRLPLFPQVAQVVVPTAAYWSEKYNQSVSYTAERGYTVALYLPLIP 220
BLAST of CN188347 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSJ (REF/SRPP-like protein Os05g0151300/LOC_Os05g05940 OS=Oryza sativa subsp. japonica GN=Os05g0151300 PE=2 SV=2) HSP 1 Score: 205.682 bits (522), Expect = 2.127e-52 Identity = 108/221 (48.87%), Postives = 147/221 (66.52%), Query Frame = 1 Query: 76 EKNVPSQQNMDIE---EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVP 729 E+ V ++ ++E EE+RL+YLEFVQ A VL+ Y YAK +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPPV+K+ AP +ARS A+EV+ AG+ GTA+G+AKS + EP A++LY++YEP AE+ A AW LN++PL S +YN V A++G V++YLPLVP Sbjct: 15 EEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVP 224
BLAST of CN188347 vs. ExPASy Swiss-Prot
Match: Y5513_ORYSI (REF/SRPP-like protein OsI_017815 OS=Oryza sativa subsp. indica GN=OsI_017815 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.127e-52 Identity = 108/221 (48.87%), Postives = 147/221 (66.52%), Query Frame = 1 Query: 76 EKNVPSQQNMDIE---EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVP 729 E+ V ++ ++E EE+RL+YLEFVQ A VL+ Y YAK +GPL+PGV+ VEGTVK VVGPVYD++HG+P++LLKF+DRKV ESV +LD RVPPV+K+ AP +ARS A+EV+ AG+ GTA+G+AKS + EP A++LY++YEP AE+ A AW LN++PL S +YN V A++G V++YLPLVP Sbjct: 15 EEEVTVEKTPEMEAAAEEERLRYLEFVQQAAAQVLVLAAAAYAYAKQGAGPLRPGVDHVEGTVKAVVGPVYDRFHGVPLDLLKFLDRKVGESVQELDRRVPPVVKE-----------APGLARSAAAEVRQAGLVGTATGLAKSAIARAEPRARDLYTRYEPVAERKAAEAWAALNRLPLVPSVTRAVLPAAASLSARYNTAVADGAKRGSAVATYLPLVP 224
BLAST of CN188347 vs. ExPASy Swiss-Prot
Match: SRPP_HEVBR (Small rubber particle protein OS=Hevea brasiliensis GN=SRPP PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.633e-44 Identity = 101/205 (49.27%), Postives = 124/205 (60.49%), Query Frame = 1 Query: 115 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVP 729 EE+RLKYL+FV+ A ++ + F LY YAK SGPLKPGV+++E VK VV PVY +P+E +KF+D+ VD SVT LD VPPV+KQV AQ S AQ AP + VAS V GV + AK LY+ EPKAEQYAV WR LN++PL Y SEKYN V E+GY+VSSYLPL+P Sbjct: 6 EEERLKYLDFVRAAGVYAVDSFSTLYLYAKDISGPLKPGVDTIENVVKTVVTPVYY----IPLEAVKFVDKTVDVSVTSLDGVVPPVIKQVSAQTYSVAQDAPRIVLDVASSVFNTGV---------------QEGAKALYANLEPKAEQYAVITWRALNKLPLVPQVANVVVPTAVYFSEKYNDVVRGTTEQGYRVSSYLPLLP 191
BLAST of CN188347 vs. ExPASy Swiss-Prot
Match: SRP_PHAVU (Stress-related protein OS=Phaseolus vulgaris GN=SRP PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 3.764e-41 Identity = 94/181 (51.93%), Postives = 115/181 (63.54%), Query Frame = 1 Query: 187 LYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVP 729 LY YAK ++GPLKPGV +VE VK VV PVYD++H +P+ELLK+ DRKV E LD VP +K+V +QA RSV SEV+ GV+ AK +YSKYEP AEQ AVSAWRKLNQ+PLF YC+EKYN+ +VS+AEKGY+VS+YLPLVP Sbjct: 6 LYSYAKERAGPLKPGVNTVEDAVKTVVAPVYDRFHLVPVELLKYADRKVGE----LDRHVPSNVKKVSSQA-----------RSVVSEVRRDGVS---------------TFAKTVYSKYEPTAEQCAVSAWRKLNQLPLFPQVANAVLPKAAYCTEKYNEVIVSSAEKGYRVSAYLPLVP 156
BLAST of CN188347 vs. ExPASy Swiss-Prot
Match: Y2778_ARATH (REF/SRPP-like protein At2g47780 OS=Arabidopsis thaliana GN=At2g47780 PE=2 SV=1) HSP 1 Score: 158.688 bits (400), Expect = 2.982e-38 Identity = 84/206 (40.78%), Postives = 120/206 (58.25%), Query Frame = 1 Query: 112 EEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPKAEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVP 729 ++E +LK+LEF+QVA ++ CF LY AK +GPLK GVE++E V+ V+ P+Y+K+H +P +LL F+DRKVD+ ++ VP ++KQ +QAL +VA+EV+ GV T +A+SV KYEPA AE YA + WR LNQ+PLF Y SEKYN V ++ Y + YLP++P Sbjct: 36 DDEMKLKHLEFIQVAAVYFAACFSTLYELAKDNAGPLKLGVENIEDCVRTVLAPLYEKFHDVPFKLLLFVDRKVDDVFFDVETYVPSLVKQASSQAL-----------TVATEVQRTGVVDTTKSIARSVRDKYEPA-----------AEYYAATLWRLLNQLPLFPEVAHLVIPTAFYWSEKYNDAVRYVGDRDYFGAEYLPMIP 219
BLAST of CN188347 vs. ExPASy Swiss-Prot
Match: Y1736_ARATH (REF/SRPP-like protein At1g67360 OS=Arabidopsis thaliana GN=At1g67360 PE=2 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 5.276e-27 Identity = 79/207 (38.16%), Postives = 96/207 (46.38%), Query Frame = 1 Query: 115 EEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEVKTAGVAGTASGMAKSVYTKYEPAAKELYSKYEPK--AEQYAVSAWRKLNQMPLFXXXXXXXXXXXXYCSEKYNQTVVSAAEKGYKVSSYLPLVP 729 +E LK+L FV++ATIH+L NLY YAK SGPLK VE VEG V VV PVY K+ +P LL F+D KV E K D PP+ K+V QA A A+S E +T G P A Y+ E K +V W KLNQ + S +YN V GY + YLPLVP Sbjct: 9 KEVALKHLAFVRIATIHILASVSNLYEYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDVPDSLLVFLDHKVGEVSYKFDEHAPPMAKKVVNQAHVLIYKATEKAQSFVKEARTGG-----------------PKAAFNYAATEYKFFVVTNSVKVWAKLNQYKPIHAMGDKALPVAAHFSSRYNDLVTDMTNMGYSLVGYLPLVP 198
BLAST of CN188347 vs. ExPASy Swiss-Prot
Match: REF_HEVBR (Rubber elongation factor protein OS=Hevea brasiliensis PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 1.487e-21 Identity = 57/129 (44.19%), Postives = 84/129 (65.12%), Query Frame = 1 Query: 67 MAEEKNVPSQQNMDIEEEQRLKYLEFVQVATIHVLLCFHNLYGYAKAKSGPLKPGVESVEGTVKNVVGPVYDKYHGLPIELLKFIDRKVDESVTKLDCRVPPVLKQVPAQALSAAQMAPVVARSVASEV 453 MAE+++ +QQ + + LKYL FVQ A + + F N+Y +AK KSGPL+PGV+ +EG VKNV P+Y+++ +P LKF+D V SVT +D +PP++K Q +SA + AP ARS+AS + Sbjct: 1 MAEDED--NQQG----QGEGLKYLGFVQDAATYAVTTFSNVYLFAKDKSGPLQPGVDIIEGPVKNVAVPLYNRFSYIPNGALKFVDSTVVASVTIIDRSLPPIVKDASIQVVSAIRAAPEAARSLASSL 123 The following BLAST results are available for this feature:
BLAST of CN188347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188347 ID=CN188347; Name=CN188347; organism=Citrus sinensis; type=EST; length=731bpback to top |