EY666034

Overview
NameEY666034
Unique NameEY666034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length829
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5909 contig Csv1_Contig5909:341..1169. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: WD66_PHYPO (66 kDa stress protein OS=Physarum polycephalum PE=2 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.881e-36
Identity = 85/244 (34.84%), Postives = 141/244 (57.79%), Query Frame = 3
Query:    3 KVILSSLYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIE-EEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAHLGG 731
            K + S  YDG+I++W    G    +    ++     A ++  ++V+   D+      L   Q   A    + SQP+ ++VA    ++ +V T + VV+L+G +V ST  +++  T   ++ DGSE  +G++D  + +YS+ G TL+E+AVL  HRG ++ I YSPD   FAS D NR+  VWD+ SR++K++  +YH AR+  LAW+ N++   TGSLD+   ++ + +P S  + IK AH GG
Sbjct:  333 KALYSGSYDGVILQWNLETGIAVPIAGTGHTSSVTQAVVQGNKLVSVSVDDTTRFTPLNPPQYA-AQGAKLDSQPQSVAVA-QGKDIAVVVTLNSVVVLQGEKVASTTAVKYQPTVVRVSVDGSEVAVGAKDNSIHIYSLSGTTLSEQAVLSGHRGFLTAIAYSPDGKHFASADQNRDIFVWDKASRKIKVEGWVYHNARVTSLAWNSNSNNIVTGSLDSHVYVWSVSEP-SKHIAIKNAHRGG 573          
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: WD42_DICDI (WD repeat-containing protein 2 homolog OS=Dictyostelium discoideum GN=wdpA PE=2 SV=2)

HSP 1 Score: 118.627 bits (296), Expect = 4.224e-26
Identity = 75/245 (30.61%), Postives = 131/245 (53.47%), Query Frame = 3
Query:    9 ILSSLYDGLIVKWIQGIG----YGGKLQRKENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAHLGG 731
            + S+ YD  +++W    G    + G   + + + IK      ++++T   D+ +   S+     G +  +D  +Q    +VA     +V VS  + + +++G ++VS     +  T+ AI  + +E  +G +D K+ V+++ G+ LT    L+ HRGA++ + YSP     ASG  NRE IVW    +E K K  + HTARIN +AWS ++   A+ SLD+   I+ +  P +SP+ +K +HLGG
Sbjct:  337 LYSASYDASLLQWDLSTGLATNFTGPAHKNQITSIKING---DQLITCAMDDSVKISSISKKTYGESIGVDSPAQ----AVAFSGDVVVAVSMKT-IYVIKGGKIVSQTAATWEPTSVAI--NDTEVSVGGKDNKIHVFTLSGNNLTASHTLDNHRGAITDLSYSPCGKYLASGCSNREVIVWS--GKEAKSKGWVNHTARINAVAWSNDSKFVASASLDSQIYIWNVENPTASPVQVKNSHLGG 569          
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: WDR1_DROME (Actin-interacting protein 1 OS=Drosophila melanogaster GN=flr PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.808e-24
Identity = 69/257 (26.85%), Postives = 139/257 (54.09%), Query Frame = 3
Query:    9 ILSSLYDGLIVKWIQGIGYGGKLQRK-ENSQIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSI-DIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWD-RVSREVKLKNMLYHTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAHLGGGLGINFSLENHSV 770
            I +  +DG++  W  G G   ++      +QI   AA  + + T G D+ + + S++G+   Y + +  +  QP+ L++ L    ++ ++    + L++  + + ++ +++  ++ A+  D S+  +G  D KL +Y+++G  L  +  L+ H GAV+ + YSPD+    + D +R+ +++     +    K   +H+AR+N +AWSPN+ + A+GSLDT  II+ +  PA   + IK AH    +     L+N++V
Sbjct:  340 IYTGSHDGVVTNWNSGSGTNDRITGTGHGNQINGIAAWGDFVYTCGIDDSLRQFSVEGNS--YTDYVVKLNCQPRGLAI-LRNENIIALACIKELTLVQDQKKIFSLPIKYEASSIAVNADTSDVAVGGDDQKLHIYTLKGGVLEPKVELD-HLGAVTDVSYSPDLKYLVACDAHRKVVLYSVEEYKPAHNKEWGFHSARVNTVAWSPNSLLVASGSLDTTIIIWSVANPAKHTI-IKNAHPQSQITRLVWLDNNTV 591          
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: YE85_SCHPO (Uncharacterized WD repeat-containing protein C9G1.05 OS=Schizosaccharomyces pombe GN=SPAC9G1.05 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.362e-16
Identity = 67/247 (27.13%), Postives = 116/247 (46.96%), Query Frame = 3
Query:   24 YDGLIVKWIQGIGYGGKLQRKENS-QIKCFAAIEEEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAHLGGGLGINFSLEN 761
            YDG ++ W  G      L  + ++ Q+      ++ ++T G D+ +  + ++       N    G QP  + V      L+LV T S + +LR    VST    +  +A A  P  SE  +G +D  + ++++    L E A  +     ++ + YSPD    A GD + + +++D  SREV      +HT RI  ++W+  ++  AT SLDT   IY + +P    + +K AH  G   + +  EN
Sbjct:  335 YDGTVLSWDIGKQKAFPLVGESHTNQVMQMIMADDHVITIGMDDTLRVIDIKQGCFAKDNVFPTGYQP--IGVCSVEDCLILV-TVSDIQVLRSLTGVSTAKTIYQPSAVASHPLKSEFCVGGEDCCVYIHTLEKGELCEVAQCKDSTAPITCLAYSPDGKYLACGDASGKVVLYDANSREVITSRWAFHTGRILGMSWNAKSTHLATASLDTNIHIYSVERPMKY-IAMKNAHSLGATQVEWVSEN 577          
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: WDR1_RAT (WD repeat-containing protein 1 OS=Rattus norvegicus GN=Wdr1 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.709e-14
Identity = 67/243 (27.57%), Postives = 113/243 (46.50%), Query Frame = 3
Query:    9 ILSSLYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEE--EIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALH-YPELVLVSTDSGVVLLRGAEVVSTI-NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLY-HTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAH 722
            I S  +DG I  W    G       K ++       ++E  ++V+   D+ +   +L          + +  QPK ++V    Y  +V +     +VLL+  +   +I N  +     A+ P G    +G  DG +RVYSI G TL +E  L + +G V+ + YS D +  A  D ++   V+  V+      N+ Y H A+I CLAWSP+N   A+G +D    ++ +  P  + + I+ AH
Sbjct:  337 IYSGSHDGHINYWDSETGENDSFSGKGHTNQVSRMTVDESGQLVSCSMDDTVRYTNLTLRDYSGQGVVKLDVQPKCVAVGPGGYTVVVCIGQ---IVLLKDQKKCFSIDNPGYEPEVVAVHPGGDTVAVGGSDGNVRVYSILGATLKDEGKLLEAKGPVTDLAYSHDGAFLAVCDASKVVTVFS-VADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDP-ETKVKIQDAH 574          
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: WDR1_CHICK (WD repeat-containing protein 1 OS=Gallus gallus GN=WDR1 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 4.844e-14
Identity = 63/241 (26.14%), Postives = 110/241 (45.64%), Query Frame = 3
Query:    9 ILSSLYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEE--EIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALHYPELVLVSTDSGVVLLRGAEVVSTIN-LRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLYHTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAH 722
            I S   DG I  W    G       K ++      A++E  ++VT   D+ +   +L        +++ +  QPK L+V      +VL      +VL++  +    I+ L +   A A+ P G    +G  DG +R+YSI+G +L  +    + +G V+ + YS D +  A  D N+   V+      V+      H A++ C+AWSP+N   A+G +D    ++ +  P  + + I  AH
Sbjct:  339 IYSGSNDGHINYWDSDTGENDGFSGKGHTNQVSRMAVDEMDQLVTCSMDDTVRYTNLSKRDYSGQDAVKMDVQPKCLAVGPGGYTVVLCIGQ--IVLMKDKKKCFAIDDLGYEPEAVAVHPGGGSVAVGGTDGNVRLYSIQGTSLKSDDKTLEAKGPVTDLAYSHDGAFLAVCDANKVVTVFSVPDGYVEHNVFYGHHAKVVCIAWSPDNEHFASGGMDMMVYVWTVSDP-ETRIKIPDAH 576          
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: WDR1_MOUSE (WD repeat-containing protein 1 OS=Mus musculus GN=Wdr1 PE=1 SV=3)

HSP 1 Score: 78.1814 bits (191), Expect = 6.327e-14
Identity = 68/243 (27.98%), Postives = 112/243 (46.09%), Query Frame = 3
Query:    9 ILSSLYDGLIVKWIQGIGYGGKLQRK-ENSQIKCFAAIE-EEIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALH-YPELVLVSTDSGVVLLRGAEVVSTI-NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLY-HTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAH 722
            I S  +DG I  W    G       K   +Q+      E E++V+   D+ +   +L          + +  QPK ++V    Y  +V +     +VLL+  +   +I N  +     A+ P G    +G  DG +RVYSI   TL +E  L + +G V+ + YS D +  A  D ++   V+  V+      N+ Y H A+I CLAWSP+N   A+G +D    ++ +  P  + + I+ AH
Sbjct:  337 IYSGSHDGHINYWDSETGENDSFSGKGHTNQVSRMTVNESEQLVSCSMDDTVRYTNLTLRDYSGQGVVKLDVQPKCVAVGPGGYTVVVCIGQ---IVLLKDQKKCFSIDNPGYEPEVVAVHPGGDTVAVGGTDGNVRVYSILASTLKDEGKLLEAKGPVTDVAYSHDGAFLAVCDASKVVTVFS-VADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDP-ETKVKIQDAH 574          
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: WDR1_HUMAN (WD repeat-containing protein 1 OS=Homo sapiens GN=WDR1 PE=1 SV=4)

HSP 1 Score: 78.1814 bits (191), Expect = 6.327e-14
Identity = 67/243 (27.57%), Postives = 112/243 (46.09%), Query Frame = 3
Query:    9 ILSSLYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEE--EIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALH-YPELVLVSTDSGVVLLRGAEVVSTI-NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLY-HTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAH 722
            I S  +DG I  W    G       K ++       ++E  ++++   D+ +   SL          + +  QPK ++V    Y  +V +     +VLL+      +I N  +     A+ P G    IG  DG +R+YSI G TL +E  L + +G V+ + YS D +  A  D ++   V+  V+      N+ Y H A+I CLAWSP+N   A+G +D    ++ +  P  + + I+ AH
Sbjct:  337 IYSGSHDGHINYWDSETGENDSFAGKGHTNQVSRMTVDESGQLISCSMDDTVRYTSLMLRDYSGQGVVKLDVQPKCVAVGPGGYAVVVCIGQ---IVLLKDQRKCFSIDNPGYEPEVVAVHPGGDTVAIGGVDGNVRLYSILGTTLKDEGKLLEAKGPVTDVAYSHDGAFLAVCDASKVVTVFS-VADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDP-ETRVKIQDAH 574          
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: WDR1_BOVIN (WD repeat-containing protein 1 OS=Bos taurus GN=WDR1 PE=2 SV=3)

HSP 1 Score: 76.2554 bits (186), Expect = 2.404e-13
Identity = 66/243 (27.16%), Postives = 112/243 (46.09%), Query Frame = 3
Query:    9 ILSSLYDGLIVKWIQGIGYGGKLQRKENSQIKCFAAIEE--EIVTSGFDNKIWRVSLQGDQCGYANSIDIGSQPKDLSVALH-YPELVLVSTDSGVVLLRGAEVVSTI-NLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKLKNMLY-HTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAH 722
            I S  +DG I  W    G       K ++       ++E  ++V+   D+ +   +L          + +  QPK L+V    Y  +V +     +VLL+      +I N  +     A+ P G    +G  DG +R+YSI G TL +E  L + +G V+ + +S D +  A  D ++   V+  V+      N+ Y H A+I CLAWSP+N   A+G +D    ++ +  P  + + I+ AH
Sbjct:  337 IYSGSHDGHINYWDSETGENDSFAGKGHTNQVSRMTVDEHGQLVSCSMDDTVRYTNLTLRDYSGQGVVKLDVQPKCLAVGPGGYTVVVCIGQ---IVLLKDQRKCFSIDNPGYEPEVVAVHPGGETVAVGGADGNVRLYSILGTTLKDEGKLLEAKGPVTDLAFSHDGAFLAVCDASKVVTVFS-VADGYSENNVFYGHHAKIVCLAWSPDNEHFASGGMDMMVYVWTLSDP-ETRVKIQDAH 574          
BLAST of EY666034 vs. ExPASy Swiss-Prot
Match: WDR1_CAEEL (Actin-interacting protein 1 OS=Caenorhabditis elegans GN=unc-78 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.136e-13
Identity = 44/168 (26.19%), Postives = 88/168 (52.38%), Query Frame = 3
Query:  228 DLSVALHYPELVLVSTDSGVVLLRGAEVVSTINLRFPVTASAIAPDGSEAIIGSQDGKLRVYSIRGDTLTEEAVLEKHRGAVSVIRYSPDVSMFASGDVNREAIVWDRVSREVKL---KNMLYHTARINCLAWSPNNSMGATGSLDTCGIIYEI*QPASSPMTIKGAH 722
            D++VA  Y  + + S             ++ + + +  +  A++ D     +G QD K+ VY + G +++E   +  H   ++ + +S + +   + D +R+ I +  V+   +L    +  +HTA++ C++WSP+N   ATGSLD   I++ + +P+  P+ IKGAH
Sbjct:  424 DIAVAACYKHIAIYSHGK----------LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIV-HPAEITSVAFSNNGAFLVATDQSRKVIPYS-VANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAH 579          
The following BLAST results are available for this feature:
BLAST of EY666034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
WD66_PHYPO5.881e-3634.8466 kDa stress protein OS=Physarum polycephalum PE=... [more]
WD42_DICDI4.224e-2630.61WD repeat-containing protein 2 homolog OS=Dictyost... [more]
WDR1_DROME8.808e-2426.85Actin-interacting protein 1 OS=Drosophila melanoga... [more]
YE85_SCHPO1.362e-1627.13Uncharacterized WD repeat-containing protein C9G1.... [more]
WDR1_RAT3.709e-1427.57WD repeat-containing protein 1 OS=Rattus norvegicu... [more]
WDR1_CHICK4.844e-1426.14WD repeat-containing protein 1 OS=Gallus gallus GN... [more]
WDR1_MOUSE6.327e-1427.98WD repeat-containing protein 1 OS=Mus musculus GN=... [more]
WDR1_HUMAN6.327e-1427.57WD repeat-containing protein 1 OS=Homo sapiens GN=... [more]
WDR1_BOVIN2.404e-1327.16WD repeat-containing protein 1 OS=Bos taurus GN=WD... [more]
WDR1_CAEEL9.136e-1326.19Actin-interacting protein 1 OS=Caenorhabditis eleg... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C1-102-013-B02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY666034 ID=EY666034; Name=EY666034; organism=Citrus sinensis; type=EST; length=829bp
CGAAGGTTATCCTGTCCAGCCTTTATGATGGTTTGATAGTTAAATGGATT
CAAGGAATTGGTTATGGTGGTAAATTACAGAGAAAAGAGAACTCTCAAAT
TAAATGTTTTGCAGCTATTGAAGAAGAGATTGTTACGTCTGGATTTGACA
ACAAGATATGGAGAGTTTCCCTACAAGGTGATCAATGTGGATATGCAAAT
TCCATTGATATTGGCAGTCAACCAAAAGACTTAAGTGTTGCCCTTCACTA
CCCCGAACTTGTGTTGGTCTCAACGGATTCTGGAGTTGTTTTGCTCCGCG
GTGCAGAAGTGGTGTCAACCATTAACCTTCGTTTTCCCGTGACAGCTTCT
GCAATCGCGCCTGATGGAAGTGAGGCCATTATAGGTAGTCAAGATGGTAA
ACTACGTGTTTATTCAATCAGAGGGGATACTCTTACAGAAGAAGCTGTCC
TGGAGAAACACCGAGGGGCAGTTAGTGTCATACGCTACTCTCCTGATGTT
TCAATGTTTGCATCGGGTGATGTAAATCGAGAAGCCATAGTGTGGGATCG
TGTCTCCCGAGAGGTAAAGCTTAAGAACATGCTGTACCACACTGCCCGCA
TTAACTGTCTTGCTTGGTCTCCTAATAACAGTATGGGTGCTACTGGATCA
CTTGATACCTGTGGTATTATATATGAAATTTGACAGCCAGCATCTAGCCC
CATGACCATAAAAGGAGCCCACTTGGGGGGGGGTTTAGGGATTAACTTTT
CCCTGGAGAACCATTCGGTGGGTTAACTCTTGGGGAGGATGCTTTGGGCC
CGTGTTTGGAGGGGTGACCCCCAATTTGG
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