CN188337
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_BOVIN (Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.702e-36 Identity = 78/151 (51.66%), Postives = 101/151 (66.89%), Query Frame = -2 Query: 299 SVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 733 +VSWAPA+ PG+L+ ++K AS GCDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V +WTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 155 AVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_RAT (Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1) HSP 1 Score: 151.369 bits (381), Expect = 4.835e-36 Identity = 78/151 (51.66%), Postives = 101/151 (66.89%), Query Frame = -2 Query: 299 SVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 733 +VSWAPA+ PG+L+ ++K AS GCDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 155 AVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_MOUSE (Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3) HSP 1 Score: 151.369 bits (381), Expect = 4.835e-36 Identity = 78/151 (51.66%), Postives = 101/151 (66.89%), Query Frame = -2 Query: 299 SVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 733 +VSWAPA+ PG+L+ ++K AS GCDN +K+W+ +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC G W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 155 AVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_HUMAN (Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35 Identity = 77/151 (50.99%), Postives = 100/151 (66.23%), Query Frame = -2 Query: 299 SVSWAPAMAPGALVGLGLLDP---VQKLASCGCDNTVKVWKMY-NGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVV 733 +VSWAPA+ PG+L+ +++ AS GCDN +K+WK +G WK + L+ HSDWVR VAWAP++GLP STIAS SQDG V IWTC W ++L F VW VSWS+T N+LAV+ +N VTLWKE+VDG+W +S V Sbjct: 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEE--QKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISDV 303
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_DICDI (Protein transport protein SEC13 OS=Dictyostelium discoideum GN=sec13 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.535e-33 Identity = 72/150 (48.00%), Postives = 97/150 (64.67%), Query Frame = -2 Query: 296 SVSWAPAMAPGALVGLG---LLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 733 SVSW+PA P +LV + P++++ + CDN +K++K W +D L+ H DWVR VAWAPN+GLP S IAS SQD +V++WT + G W G+ L F VW VSWS+ GN+LAV+ +N VTLWKE VD EW+ +S VE Sbjct: 153 SVSWSPAAIPTSLVNSANTIIPAPIKRIVTGSCDNLIKIFKNVEDKWILD--KQLEDHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVWTQDENG-VWSGKPLPKFDDIVWRVSWSVIGNILAVSCGDNQVTLWKEGVDSEWKLISHVE 299
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_USTMA (Protein transport protein SEC13 OS=Ustilago maydis GN=SEC13 PE=3 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 3.356e-29 Identity = 72/172 (41.86%), Postives = 97/172 (56.40%), Query Frame = -2 Query: 296 SVSWAPAMAPGALVGL------------GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQWEGRVL-------------KDFKTPVWSVSWSLTGNLLAVADAN-NVTLWKEAVDGEWQQVSVVE 733 +VSWAPA+ PG+L+ G V++ AS GCDNTVK+W+ + ALQ HSDWVR VA+APN+GLP+S +A+ASQD TV+IWT W L F VW VSWS++GN+LAV+ + +TLWKE + G W+ VS ++ Sbjct: 192 AVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWEFSQEANRFVEVEALQGHSDWVRDVAFAPNVGLPRSYLATASQDRTVLIWTQDSPTAAWSKTALNPISASAAAGAGSNKFPDTVWRVSWSVSGNVLAVSCGDGKITLWKENLKGAWECVSEMD 363
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_MAGGR (Protein transport protein SEC13 OS=Magnaporthe grisea GN=SEC13 PE=3 SV=2) HSP 1 Score: 126.331 bits (316), Expect = 1.666e-28 Identity = 71/151 (47.02%), Postives = 92/151 (60.93%), Query Frame = -2 Query: 296 SVSWAPAMAPGALVGLGLLDPVQK-LASCGCDNTVKVWKMYNGIWKMDCFPA--LQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 733 SVSWAP+ APG+++ Q+ + G DNT+K+W + C L H+DWV V W+P + L KS IASASQD TV IWT W+ RVLK+F T VW VSWSL+GN+LAV+ +N VTLWKE + GEW V+ +E Sbjct: 146 SVSWAPSTAPGSIISTNATPAAQRRFVTGGSDNTLKIWSWDAASAQYRCEEGGVLSGHTDWVLDVDWSPTV-LQKSYIASASQDRTVRIWTSDSSNPGVWQSRVLKEFDTTVWRVSWSLSGNVLAVSSGDNKVTLWKENLKGEWACVNSLE 295
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_YARLI (Protein transport protein SEC13 OS=Yarrowia lipolytica GN=SEC13 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.405e-27 Identity = 71/152 (46.71%), Postives = 93/152 (61.18%), Query Frame = -2 Query: 296 SVSWAPAMAPGALVGL--GLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTCAKEGEQ-WEGRVLKDFKTP--VWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 733 S SWAP G+L+ G ++ + GCDN VK+WK L H DWVR VAW+ ++ L KS IASASQD TV++WT +EG Q W+ ++L+D P VW VSWSL+GN+LAV+ +N VTLWKE + GEW+ VVE Sbjct: 149 SASWAPPAVSGSLIQPINGKASNNIRIVTGGCDNLVKIWKYDPSSKTYVIEETLSGHKDWVRDVAWSSSV-LSKSYIASASQDKTVIVWT--QEGNQPWKKKLLQDIPFPDVVWKVSWSLSGNVLAVSGGDNKVTLWKENLTGEWESAGVVE 297
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_EMENI (Protein transport protein sec13 OS=Emericella nidulans GN=sec13 PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 9.140e-27 Identity = 68/152 (44.74%), Postives = 96/152 (63.16%), Query Frame = -2 Query: 296 SVSWAPAMAPGALV----GLGLLDPVQKLASCGCDNTVKVWKMYNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWTC-AKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 733 S+SWAPA +PG+LV G+G ++ + G DN +K+W + L+ HSDWVR VAW+P++ L KS IASASQD TV +WT A QW +VL +F +W VSWS +GN+LAV+ +N V+LWKE + G+W++V +E Sbjct: 162 SISWAPAASPGSLVSSNPGIG---QQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDWVRDVAWSPSI-LSKSYIASASQDKTVRVWTADASNPGQWTSQVL-EFDNVLWRVSWSPSGNILAVSGGDNKVSLWKENLRGQWEKVKDIE 308
BLAST of CN188337 vs. ExPASy Swiss-Prot
Match: SEC13_NEUCR (Protein transport protein sec-13 OS=Neurospora crassa GN=sec-13 PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.194e-26 Identity = 77/156 (49.36%), Postives = 99/156 (63.46%), Query Frame = -2 Query: 296 SVSWAPAMAPGALV----GLGLLDPVQKLASCGCDNTVKVWKM---YNGIWKMDCFPALQMHSDWVRSVAWAPNLGLPKSTIASASQDGTVVIWT--CAKEGEQWEGRVLKDFKTPVWSVSWSLTGNLLAVADANN-VTLWKEAVDGEWQQVSVVE 733 SVSWAPA PG++V G G ++ + G DN +K+W NG +K++ P L H+DWVR VAW+P + L KS IASASQD TV IWT A GE W+ +VL +F VW VSWSL+GN+LA + NN VTLWKE + GEW+ V +E Sbjct: 154 SVSWAPATTPGSIVSSNPGPGSTGN-RRFVTGGSDNLLKIWTFDPATNG-YKLEREP-LAGHTDWVRDVAWSPTV-LQKSYIASASQDKTVRIWTSDAANPGE-WKCKVL-NFDAAVWRVSWSLSGNVLAASSDNNKVTLWKENLKGEWENVKTIE 303 The following BLAST results are available for this feature:
BLAST of CN188337 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188337 ID=CN188337; Name=CN188337; organism=Citrus sinensis; type=EST; length=737bpback to top |