CN188332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_HUMAN (Methylthioribose-1-phosphate isomerase OS=Homo sapiens GN=MRI1 PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.795e-29 Identity = 82/189 (43.39%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 141 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNS--KFSVLTHCNTGSLATAGYGTALGVIRALH 698 +L++I Y RGSLQ+LDQ LP ++ Y + W AIR M VRG VE+ G AA A F+ DKL +LV++RPTAVN++ AA L ++ ++ A + +V + I E ML+ D+ N++IG GA L ++ S K +VLTHCNTG+LATAGYGTALGVIR+LH Sbjct: 2 TLEAIRYSRGSLQILDQLLLPKQSRYEAVGSVHQAWEAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVA-FVRDKLSFLVTARPTAVNMARAARDLADVAAREAEREGATEEAVRERVICCTEDMLEKDLRDNRSIGDLGARHLLERVAPSGGKVTVLTHCNTGALATAGYGTALGVIRSLH 189
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_XENTR (Methylthioribose-1-phosphate isomerase OS=Xenopus tropicalis GN=mri1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.592e-28 Identity = 81/191 (42.41%), Postives = 109/191 (57.07%), Query Frame = 3 Query: 141 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLG---DKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATA-SEANSVFQAYIEAAEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALH 698 SL+S+ Y RGSLQ+L+Q LP ++ Y + G AIR M VRG VE+ S T D SF+ + L +LV +RPTAVN+ AA +L ++K A A + + ++ I+ AE +LK DV N+ IG +GA L+ K +LTHCNTGSLATAGYGTALGV+R+LH Sbjct: 2 SLESVRYSRGSLQVLNQLLLPHKSEYEPVTGVQQGADAIRTMKVRGAPAIAIVGVLSLAVELT-----SRTCQDVPSFIAFVQESLCHLVDARPTAVNMKKAADELNAFLAKEAEKAGATTQGLAESVIQWAEALLKKDVEDNQMIGDFGAKHILETAGPTEKVCMLTHCNTGSLATAGYGTALGVVRSLH 187
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_BOVIN (Methylthioribose-1-phosphate isomerase OS=Bos taurus GN=MRI1 PE=2 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 2.592e-28 Identity = 81/189 (42.86%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 141 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALH 698 +L++I Y RGSLQ+LDQ LP ++ Y + W AIR M VRG VE+ G AA A F+ D L +LV++RPTAVN++ AA L ++ ++ A + +V + I AE ML D+ N++IG GA L + + K +VLTHCNTG+LATAGYGTALGVIR+LH Sbjct: 2 TLEAIRYSRGSLQILDQLLLPQQSRYEAVGSVRQAWEAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVA-FVQDALSFLVTARPTAVNMARAARDLADLAAQEAEREGATEEAVRERVICWAEDMLDKDLRDNRSIGDLGAHHLLKRAAPQGGKVTVLTHCNTGALATAGYGTALGVIRSLH 189
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_XENLA (Methylthioribose-1-phosphate isomerase OS=Xenopus laevis GN=mri1 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 6.384e-27 Identity = 75/188 (39.89%), Postives = 107/188 (56.91%), Query Frame = 3 Query: 141 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAA-ATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGAS-FLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALH 698 SL+S+ Y RGSLQ+L+Q LP ++ Y + G AIR M VRG VE+ +F+ + L +LVS+RPTAVN+ AA +L +++ A + + + ++ ++ AE +LK DV N+ IG +GA L+ K +LTHCNTGSLATAGYGTALGV+R+LH Sbjct: 2 SLESVRYSRGSLQVLNQLLLPHKSEYEPVTGVQQGADAIRTMKVRGAPAIAIVGVLSLAVELTTKPCQD--VPSLITFVRESLHHLVSARPTAVNMKKAADELNAFLAEEADKPGATSQRLTESVVQWAESLLKKDVEDNQMIGDFGAKHILEKAGPTEKVCMLTHCNTGSLATAGYGTALGVVRSLH 187
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_MOUSE (Methylthioribose-1-phosphate isomerase OS=Mus musculus GN=Mri1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 8.337e-27 Identity = 80/189 (42.33%), Postives = 108/189 (57.14%), Query Frame = 3 Query: 141 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALH 698 +L++I Y GSLQ+LDQ +LP Y + AIR M VRG VE+ G AA A F+ D+L LV++RPTAVN++ AA L ++ ++ A + +V + I AE ML+ D+ N++IG GA L Q + K +VLTHCNTG+LATAGYGTALGVIR+LH Sbjct: 2 TLEAIRYSPGSLQILDQLQLPEHCHYEALSSVQQASEAIRAMKVRGAPAIALVGCLSLAVELRAGAGGPGLAALVA-FVRDQLRLLVAARPTAVNMARAARDLGQVAAQEAEREGATEETVRERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLH 189
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_RAT (Methylthioribose-1-phosphate isomerase OS=Rattus norvegicus GN=Mri1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.857e-26 Identity = 80/188 (42.55%), Postives = 106/188 (56.38%), Query Frame = 3 Query: 144 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAAT-ASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQL--KNSKFSVLTHCNTGSLATAGYGTALGVIRALH 698 L++I Y GSLQ+LDQ +LP Y + AIR M VRG VE+ G AA A F+ D+L LV++RPTAVN++ AA L + ++ A + +V + I AE ML+ D+ N++IG GA L Q + K +VLTHCNTG+LATAGYGTALGVIR+LH Sbjct: 3 LEAIRYSPGSLQILDQLQLPEHCHYETLSSVQQAREAIRAMKVRGAPAIALVGCLSLAVELQAGAGGPGLAALVA-FVRDQLSLLVAARPTAVNMARAARDLTHMAAREAELEGATEETVRERVIRFAEDMLEKDLKDNRSIGDLGARHLLEQTNPRGGKVTVLTHCNTGALATAGYGTALGVIRSLH 189
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_THISH (Methylthioribose-1-phosphate isomerase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=mtnA PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 79/188 (42.02%), Postives = 108/188 (57.45%), Query Frame = 3 Query: 138 NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEA-AEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALH 698 ++++++ + SL+LLDQR+LP ET+YL+I D AIREMVVRG + L A + DA L LE L +SRPTAVNL A A++K +I + A A +EA A + +DD+A N+ +G GA+ L + +VLTHCNTGSLAT GYGTALGVIR+ + Sbjct: 9 DTVRAVLWDGTSLKLLDQRRLPRETVYLDIPDVGAAADAIREMVVRGAPAIGITAAYGVVLAARRLPADTPDWLDA---LTPDLERLAASRPTAVNLFWALARMKSVIGQVGAD-------LPARLEAEARRIHEDDLADNRRMGELGAA-----LMDPAEAVLTHCNTGSLATGGYGTALGVIRSAY 181
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_SCHPO (Methylthioribose-1-phosphate isomerase OS=Schizosaccharomyces pombe GN=mri1 PE=2 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.682e-25 Identity = 74/187 (39.57%), Postives = 102/187 (54.55%), Query Frame = 3 Query: 141 SLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNS-KFSVLTHCNTGSLATAGYGTALGVIRALH 698 SLQ+I Y L +LDQ LP E Y+ + + D ++ I++M VRG V + +L+ ADA ++ + E+L SRPTAVNL + A ++ I E + I+ AE ML D+ N IG+ G FL K+ K +VLTHCNTGSLAT+GYGTALG+IR+LH Sbjct: 2 SLQAIIYNEDKLLVLDQLLLPYERKYISVSNVEDAFAVIKKMQVRGAPAIAIVAALSVAVGLKHLSE----DADAKEYVINSFEHLKQSRPTAVNLFETAKFMQGI------ALQEGKNCRNKIIQEAERMLVKDLEDNHNIGTAGRKFLLQHYKDKDKLTVLTHCNTGSLATSGYGTALGIIRSLH 178
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_YEAST (Methylthioribose-1-phosphate isomerase OS=Saccharomyces cerevisiae GN=MRI1 PE=1 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.282e-23 Identity = 73/210 (34.76%), Postives = 114/210 (54.29%), Query Frame = 3 Query: 108 MALDSVSIDSNSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEV--FNLNAFSGTAA--------DAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNS----KFSVLTHCNTGSLATAGYGTALGVIRAL 695 M+L+++ D + +++ S+++LDQ LP T Y+ I DG+S I+ M VRG EV N S A + L +L++L+SSRPTAVNLS++ ++K I+ ++ + S++ E ++ +D+A N +G GA +L + L+ +F+VLT CNTGSLAT+GYGTALGVIR+L Sbjct: 1 MSLEAIVFDRSEPENV-----SVKVLDQLLLPYTTKYVPIHTIDDGYSVIKSMQVRGAPAIAIVGSLSVLTEVQLIKHNPTSDVATLYSLVNWESTKTVLNKRLDFLLSSRPTAVNLSNSLVEIKNILKSSSDLKAFDGSLYNYVCE----LIDEDLANNMKMGDNGAKYLIDVLQKDGFKDEFAVLTICNTGSLATSGYGTALGVIRSL 201
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_XYLFA (Methylthioribose-1-phosphate isomerase OS=Xylella fastidiosa GN=mtnA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.775e-22 Identity = 69/173 (39.88%), Postives = 94/173 (54.34%), Query Frame = 3 Query: 174 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRA 692 L+LLDQRKLP Y+E S D AIR ++VRG + + A G +A L L+ L ++RPTAVNL+ A+++ +S A A QA AE + ++D+ N+ +G+YGA+ + VLTHCNTGSLATAG+GTALGVIRA Sbjct: 25 LKLLDQRKLPFVVEYVECHSSEDVTQAIRALIVRGAPAIGIVAGWGAVLAAREIEAVDGI--EALRKLEPALQRLHAARPTAVNLAWVLARMRRTLSAAHADWR------QAMAREAESIAREDLTANRCMGAYGAALIP-----IGSGVLTHCNTGSLATAGFGTALGVIRA 184 The following BLAST results are available for this feature:
BLAST of CN188332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188332 ID=CN188332; Name=CN188332; organism=Citrus sinensis; type=EST; length=700bpback to top |