CN188328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_CITSI (Thiazole biosynthetic enzyme, chloroplastic OS=Citrus sinensis GN=THI1 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 7.898e-69 Identity = 132/134 (98.51%), Postives = 132/134 (98.51%), Query Frame = -3 Query: 178 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVPPELILAAADSAETAD 579 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRL REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGV PELILAAADSAETAD Sbjct: 222 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVHPELILAAADSAETAD 355
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_ALNGL (Thiazole biosynthetic enzyme, chloroplastic OS=Alnus glutinosa GN=THI4 PE=2 SV=1) HSP 1 Score: 242.662 bits (618), Expect = 1.704e-63 Identity = 121/134 (90.30%), Postives = 127/134 (94.78%), Query Frame = -3 Query: 178 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVPPELILAAADSAETAD 579 SCMDPNVMEAKVVVSSCGHDGPFGATGVK L+SIGMI+ VPGMKALDMN AEDAIVRL RE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG PNALDG+YVGG+ PELILAAADSAE AD Sbjct: 218 SCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAIVRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDGSYVGGIHPELILAAADSAEIAD 351
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_ARATH (Thiazole biosynthetic enzyme, chloroplastic OS=Arabidopsis thaliana GN=THI1 PE=1 SV=1) HSP 1 Score: 238.424 bits (607), Expect = 3.214e-62 Identity = 118/134 (88.06%), Postives = 125/134 (93.28%), Query Frame = -3 Query: 178 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVPPELILAAADSAETAD 579 SCMDPNVMEAK+VVSSCGHDGPFGATGVKRLKSIGMI+ VPGMKALDMN+AEDAIVRL REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA LALK+LG PNA+DGT VG + PEL+LAAADSAET D Sbjct: 215 SCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTLVGNLSPELVLAAADSAETVD 348
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI41_MAIZE (Thiazole biosynthetic enzyme 1-1, chloroplastic OS=Zea mays GN=THI1-1 PE=2 SV=1) HSP 1 Score: 213.386 bits (542), Expect = 1.107e-54 Identity = 107/128 (83.59%), Postives = 115/128 (89.84%), Query Frame = -3 Query: 196 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVPPELILAAAD 579 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRL+ IGMI VPGMKALDMN+AED IVRL REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT + EL++A D Sbjct: 221 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTMSPPLREELMIAYKD 348
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI42_MAIZE (Thiazole biosynthetic enzyme 1-2, chloroplastic OS=Zea mays GN=THI1-2 PE=2 SV=1) HSP 1 Score: 210.305 bits (534), Expect = 9.373e-54 Identity = 107/131 (81.68%), Postives = 115/131 (87.79%), Query Frame = -3 Query: 196 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVGGVP---PELILAAAD 579 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRL+ IGMI VPGMKALDMN+AED IVRL REVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PNA+DGT P E ++A+ D Sbjct: 218 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTIPEVSPALREEFVIASKD 348
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_FUSSH (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium solani subsp. phaseoli GN=STI35 PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.536e-31 Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = -3 Query: 274 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 579 SCMDPN + A +V+S+ GHD P GA VKRL S+G IE++ GM+ LDMN AEDAIV+ RE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA ALK Sbjct: 212 SCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALK 313
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_ASPOR (Thiazole biosynthetic enzyme, mitochondrial OS=Aspergillus oryzae GN=thiA PE=3 SV=2) HSP 1 Score: 132.88 bits (333), Expect = 1.902e-30 Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = -3 Query: 274 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 579 SCMDPN + A V++S+ GHDGPFGA KRL S+G ++++ GM+ LDMNSAEDAIV+ REV G+I+ GME++EIDG RMGPTFGAM++SG KAA ALK Sbjct: 215 SCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAIVKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALK 316
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_FUSOX (Thiazole biosynthetic enzyme, mitochondrial OS=Fusarium oxysporum GN=STI35 PE=2 SV=2) HSP 1 Score: 132.494 bits (332), Expect = 2.484e-30 Identity = 65/102 (63.73%), Postives = 81/102 (79.41%), Query Frame = -3 Query: 274 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 579 SCMDPN + A +++S+ GHDGP GA VKRL S+ IE++ GM+ LDMN AEDAIV+ RE+VPG+IV GME++E+DGA RMGPTFGAM +SG KAA ALK Sbjct: 208 SCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAIVKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI2_SCHPO (Thiazole biosynthetic enzyme, mitochondrial OS=Schizosaccharomyces pombe GN=thi2 PE=2 SV=2) HSP 1 Score: 128.642 bits (322), Expect = 3.587e-29 Identity = 67/117 (57.26%), Postives = 81/117 (69.23%), Query Frame = -3 Query: 235 LLSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYV 585 L SCMDPN + A +VVS+ GHDGPFGA VKRL S ++ + M+ LDMN AED IV+ REV PGMIV GME++E DGA RMGPTFG MM SG KAA AL + A++ Y+ Sbjct: 212 LQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLIVKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEALAIFDERKAVNEKYL 328
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_UROFA (Thiazole biosynthetic enzyme, mitochondrial OS=Uromyces fabae GN=THI2 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.325e-28 Identity = 62/116 (53.45%), Postives = 83/116 (71.55%), Query Frame = -3 Query: 232 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGTYVG 579 SCMDP+ + A +V S GHDGPFGA VKR+ S G+ E + M+ LDM AED I RE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL+SL + +G VG Sbjct: 220 SCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHIANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDRVKIEEGEVVG 335 The following BLAST results are available for this feature:
BLAST of CN188328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188328 ID=CN188328; Name=CN188328; organism=Citrus sinensis; type=EST; length=764bpback to top |