CN188298
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188298 vs. ExPASy Swiss-Prot
Match: SODC_IPOBA (Superoxide dismutase [Cu-Zn] OS=Ipomoea batatas GN=SODCC PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.878e-11 Identity = 47/128 (36.72%), Postives = 65/128 (50.78%), Query Frame = -3 Query: 338 MVKAVAVLGQTHADETVEESDADGTVTFSQEGNRQTRVGGSFTDLEPDGAYALVIHQYGDIRDGWKSTGDRFKPAG-----------IAGVIAHFVADDEGTARFDLGTK-ADLSGENSVMSRGLVLH 685 MVKAVAVL + GT+ FSQEG+ T V G+ + L+P G + +H GD +G STG F PAG AG + + ++GTA F + K L+G NSV+ R +V+H Sbjct: 1 MVKAVAVLSSSEG--------VSGTIFFSQEGDGPTTVTGNVSGLKP-GLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPGDDNRHAGDLGNITVGEDGTASFTITDKQIPLTGANSVIGRAVVVH 119
BLAST of CN188298 vs. ExPASy Swiss-Prot
Match: SODC_ANACO (Superoxide dismutase [Cu-Zn] OS=Ananas comosus GN=SOD1 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 45/128 (35.16%), Postives = 66/128 (51.56%), Query Frame = -3 Query: 338 MVKAVAVLGQTHADETVEESDADGTVTFSQEGNRQTRVGGSFTDLEPDGAYALVIHQYGDIRDGWKSTGDRFKPAG-----------IAGVIAHFVADDEGTARFDL-GTKADLSGENSVMSRGLVLH 685 MVKAVAVLG + GT+ F+QEG+ T V GS + L+P G + +H GD +G STG F PAG AG + + ++GT ++ ++ LSG NS++ R +V+H Sbjct: 1 MVKAVAVLGSSEG--------VKGTIYFTQEGDGPTTVTGSISGLKP-GLHGFHVHALGDTTNGCMSTGPHFNPAGNEHGAPEDETRHAGDLGNVTVGEDGTVNVNIVDSQIPLSGSNSIIGRAVVVH 119
BLAST of CN188298 vs. ExPASy Swiss-Prot
Match: SODC1_MESCR (Superoxide dismutase [Cu-Zn] 1 OS=Mesembryanthemum crystallinum GN=SODCC.1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.465e-11 Identity = 45/128 (35.16%), Postives = 64/128 (50.00%), Query Frame = -3 Query: 338 MVKAVAVLGQTHADETVEESDADGTVTFSQEGNRQTRVGGSFTDLEPDGAYALVIHQYGDIRDGWKSTGDRFKPAG-----------IAGVIAHFVADDEGTARFD-LGTKADLSGENSVMSRGLVLH 685 MVKAV VL + GTV F+QEG+ T V G+ + L P G + +H GD +G STG F PAG AG + + D+GTA F + ++ L+G NS++ R +V+H Sbjct: 1 MVKAVVVLSSSEG--------VSGTVQFTQEGSGPTTVTGNVSGLRP-GLHGFHVHALGDTTNGCMSTGPHFNPAGKEHGAPEDETRHAGDLGNITVGDDGTATFTIIDSQIPLTGPNSIVGRAVVVH 119
BLAST of CN188298 vs. ExPASy Swiss-Prot
Match: SODC_PEA (Superoxide dismutase [Cu-Zn] OS=Pisum sativum GN=SODCC PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 7.138e-11 Identity = 46/128 (35.94%), Postives = 63/128 (49.22%), Query Frame = -3 Query: 338 MVKAVAVLGQTHADETVEESDADGTVTFSQEGNRQTRVGGSFTDLEPDGAYALVIHQYGDIRDGWKSTGDRFKPAG-----------IAGVIAHFVADDEGTARFDL-GTKADLSGENSVMSRGLVLH 685 MVKAVAVL ++ + GT+ FSQEGN T V G+ L+P G + IH GD +G STG F P G AG + + D+GT F + L+G NS++ R +V+H Sbjct: 1 MVKAVAVLSNSN--------EVSGTINFSQEGNGPTTVTGTLAGLKP-GLHGFHIHALGDTTNGCISTGPHFNPNGKEHGAPEDETRHAGDLGNINVGDDGTVSFTITDNHIPLTGTNSIIGRAVVVH 119 The following BLAST results are available for this feature:
BLAST of CN188298 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188298 ID=CN188298; Name=CN188298; organism=Citrus sinensis; type=EST; length=744bpback to top |