CK939603

Overview
NameCK939603
Unique NameCK939603
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length171
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2614 contig Csv1_Contig2614:177..347. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CK939603 vs. ExPASy Swiss-Prot
Match: MT3_CARPA (Metallothionein-like protein type 3 OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.501e-11
Identity = 31/47 (65.96%), Postives = 37/47 (78.72%), Query Frame = 1 
Query:   31 MSDACGNCDCADRSQCAKKGSSYAADFVETDLSFVSTVVVMDVQAAE 171
            MSD CGNCDCAD++QC KKGSSY AD +ET+ S ++  VVMD  AAE
Sbjct:    1 MSDTCGNCDCADKTQCVKKGSSYTADIIETEKSIMT--VVMDAPAAE 45
The following BLAST results are available for this feature:
BLAST of CK939603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MT3_CARPA1.501e-1165.96Metallothionein-like protein type 3 OS=Carica papa... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004748_B06 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IVF_B06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939603 ID=CK939603; Name=CK939603; organism=Citrus sinensis; type=EST; length=171bp
TTTAAGTTCTAAGTTCTAAGCTCAATCGACATGTCGGACGCCTGCGGCAA
CTGCGACTGCGCTGACAGGAGCCAGTGTGCGAAGAAGGGAAGCAGCTATG
CTGCTGACTTCGTCGAGACTGACTTGAGCTTTGTCAGCACCGTTGTTGTC
ATGGACGTTCAGGCTGCTGAG
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