CN188274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_AEDTR (T-complex protein 1 subunit delta OS=Aedes triseriatus PE=2 SV=1) HSP 1 Score: 199.904 bits (507), Expect = 1.258e-50 Identity = 108/189 (57.14%), Postives = 133/189 (70.37%), Query Frame = 1 Query: 193 MASPAVVPSQPRSSKTESYVDNKRKEDIXXXXXXXXXXXXXXXXTSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 + PA +P+ ++Y D + DI TSLGP+GMDKMI A+GEV ITNDGATIL +M V+ PAAKMLVELS++QD AGDGTT+VVV+AGALLK LL GIHPT ISD K + AVD+LT M+ P+EL+DR+SLVKSASTSLNSKVVSQ+S+ LAP+AV++VL V Sbjct: 2 VVKPAARGMKPQG---QAYKDKSKPADIRQSNINAAKAVSDAIRTSLGPRGMDKMIQAANGEVTITNDGATILKQMNVIHPAAKMLVELSRAQDVEAGDGTTSVVVVAGALLKAVEKLLQMGIHPTAISDAFQKCSAKAVDILTEMSTPIELTDRESLVKSASTSLNSKVVSQHSSQLAPIAVEAVLKV 187
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_TAKRU (T-complex protein 1 subunit delta OS=Takifugu rubripes GN=cct4 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 9.966e-48 Identity = 103/181 (56.91%), Postives = 127/181 (70.17%), Query Frame = 1 Query: 217 SQPRSSKTESYVDNKRKEDIXXXXXXXXXXXXXXXXTSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 S +K +Y D + I TSLGPKGMDKMI G+V ITNDGATIL +M+VL P+AKMLVELSK+QD AGDGTT+VVVIAGALL C LL GIHPT+IS++ KA V+VLTAM+ PV+L DR++L+ SA+TSL SKVVSQYS+LLAP++VD+V+ V Sbjct: 11 SNTGKNKGGAYQDRDKPAQIRYSNISAAKAVADAVRTSLGPKGMDKMIQDEKGDVTITNDGATILKQMQVLHPSAKMLVELSKAQDIEAGDGTTSVVVIAGALLDSCNRLLQRGIHPTIISESFQKAVDKGVEVLTAMSQPVQLGDRETLLNSATTSLCSKVVSQYSSLLAPMSVDAVMRV 191
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_HUMAN (T-complex protein 1 subunit delta OS=Homo sapiens GN=CCT4 PE=1 SV=4) HSP 1 Score: 189.119 bits (479), Expect = 2.220e-47 Identity = 94/145 (64.83%), Postives = 120/145 (82.76%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 TSLGPKGMDKMI G+V ITNDGATIL +M+VL PAA+MLVELSK+QD AGDGTT+VV+IAG+LL C LL GIHPT+IS++ KA +++LT M+ PVELSDR++L+ SA+TSLNSKVVSQYS+LL+P++V++V+ V Sbjct: 50 TSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKV 194
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_MOUSE (T-complex protein 1 subunit delta OS=Mus musculus GN=Cct4 PE=1 SV=3) HSP 1 Score: 188.734 bits (478), Expect = 2.900e-47 Identity = 98/179 (54.75%), Postives = 127/179 (70.95%), Query Frame = 1 Query: 223 PRSSKTESYVDNKRKEDIXXXXXXXXXXXXXXXXTSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 P S +Y D + I TSLGPKGMDKMI G+V ITNDGATIL +M+VL PAA+MLVELSK+QD AGDGTT+VV+IAG+LL C LL GIHPT+IS++ KA +++LT M+ PV+LSDR++L+ SA+TSLNSKVVSQYS+LL+P++V++V+ V Sbjct: 16 PGSRGKSAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKV 194
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_BOVIN (T-complex protein 1 subunit delta OS=Bos taurus GN=CCT4 PE=2 SV=3) HSP 1 Score: 188.734 bits (478), Expect = 2.900e-47 Identity = 94/145 (64.83%), Postives = 119/145 (82.07%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 TSLGPKGMDKMI G+V ITNDGATIL +M+VL PAA+MLVELSK+QD AGDGTT+VV+IAG+LL C LL GIHPT+IS++ KA +++LT M+ P ELSDR++L+ SA+TSLNSKVVSQYS+LL+P++VD+V+ V Sbjct: 53 TSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPEELSDRETLLNSAATSLNSKVVSQYSSLLSPMSVDAVMKV 197
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_PONAB (T-complex protein 1 subunit delta OS=Pongo abelii GN=CCT4 PE=2 SV=3) HSP 1 Score: 187.578 bits (475), Expect = 6.460e-47 Identity = 93/145 (64.14%), Postives = 119/145 (82.07%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 TSLGPKGMDKMI G+V ITNDGATIL +M+VL PAA+MLVELSK+QD AGDGTT+VV+IAG+LL C LL GIHPT+IS++ KA +++LT M+ PVELSDR++L+ SA+TSLNSKV SQYS+LL+P++V++V+ V Sbjct: 50 TSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSATTSLNSKVASQYSSLLSPMSVNAVMKV 194
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_RAT (T-complex protein 1 subunit delta OS=Rattus norvegicus GN=Cct4 PE=1 SV=3) HSP 1 Score: 187.193 bits (474), Expect = 8.437e-47 Identity = 93/145 (64.14%), Postives = 120/145 (82.76%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 TSLGPKGMDKMI G+V ITNDGATIL +M+VL PAA+MLVELSK+QD AGDGTT+VV+IAG+LL C LL GIHPT+IS++ KA +++LT M+ PV+LSDR++L+ SA+TSLNSKVVSQYS+LL+P++V++V+ V Sbjct: 50 TSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKV 194
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_SCHPO (T-complex protein 1 subunit delta OS=Schizosaccharomyces pombe GN=cct4 PE=2 SV=2) HSP 1 Score: 181.415 bits (459), Expect = 4.629e-45 Identity = 93/172 (54.07%), Postives = 124/172 (72.09%), Query Frame = 1 Query: 244 SYVDNKRKEDIXXXXXXXXXXXXXXXXTSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 ++ D ++ +++ TSLGPKGMDKMI T GEVI+TNDGATIL + VL PAAKMLV+LS +QD AGDGTT+VV++AG++L LL GIHPTVI+++ +AA VD + A+ +ELSDR+SL+++A+TSLNSK+VSQYS LLAP+AVD+VL V Sbjct: 10 AFQDREKPQEVRLSNIMAARSVADAIRTSLGPKGMDKMIQTGKGEVILTNDGATILKHLSVLHPAAKMLVDLSAAQDVEAGDGTTSVVILAGSMLACAEKLLKKGIHPTVIAESFQRAAGFTVDCMKENALAIELSDRESLLRAATTSLNSKIVSQYSNLLAPIAVDAVLKV 181
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_YEAST (T-complex protein 1 subunit delta OS=Saccharomyces cerevisiae GN=CCT4 PE=1 SV=2) HSP 1 Score: 178.718 bits (452), Expect = 3.001e-44 Identity = 90/145 (62.07%), Postives = 115/145 (79.31%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 TSLGPKGMDKMI T+ GE+II+NDG TIL +M +L P A+MLVE+S +QD+ AGDGTT+VV++ GALL LL+ GIHPT+I+D+ AA +VD+L M V LSDR+ LV++ASTSL+SK+VSQYS+ LAPLAVDSVL + Sbjct: 37 TSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQDSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHKVSLSDREQLVRAASTSLSSKIVSQYSSFLAPLAVDSVLKI 181
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPD_CAEEL (T-complex protein 1 subunit delta OS=Caenorhabditis elegans GN=cct-4 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.140e-43 Identity = 97/185 (52.43%), Postives = 122/185 (65.95%), Query Frame = 1 Query: 205 AVVPSQPRSSKTESYVDNKRKEDIXXXXXXXXXXXXXXXXTSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 A Q S + ++ D + E + TSLGP+GMDKMI + +G+V ITNDGATILN+M V+ P AKMLVELSK+QD AGDGTTTVVV+AGALL LLS GIHPT IS++ AA A +L M+ PV+LS+ L K A+TSLNSKVVSQ+S LLAP+AV++V + Sbjct: 9 AATARQSASGRERNFKDKDKPESVRNSNIVAAKAVADAVRTSLGPRGMDKMIQSGNGDVTITNDGATILNQMSVIHPTAKMLVELSKAQDIEAGDGTTTVVVMAGALLDAAQNLLSKGIHPTTISESFQSAAAEAEKILDEMSSPVDLSNDALLNKMATTSLNSKVVSQHSWLLAPMAVNAVKKI 193 The following BLAST results are available for this feature:
BLAST of CN188274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188274 ID=CN188274; Name=CN188274; organism=Citrus sinensis; type=EST; length=760bpback to top |