CK939540

Overview
NameCK939540
Unique NameCK939540
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length110
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CK939540 vs. ExPASy Swiss-Prot
Match: PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2 SV=2)

HSP 1 Score: 65.4698 bits (158), Expect = 9.952e-11
Identity = 30/36 (83.33%), Postives = 33/36 (91.67%), Query Frame = 1 
Query:    1 EIHAYAIRNMLATDVAVGSALVDMYAKCGCLNFARR 108
            EIHAYAI+N LATDVAVGSALVDMYAKCGCL  +R+
Sbjct:  538 EIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRK 573
The following BLAST results are available for this feature:
BLAST of CK939540 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PP285_ARATH9.952e-1183.33Pentatricopeptide repeat-containing protein At3g57... [more]
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Properties
Property NameValue
Genbank descriptionCGF1004749_B04 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IF_B04 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939540 ID=CK939540; Name=CK939540; organism=Citrus sinensis; type=EST; length=110bp
GAGATCCATGCTTATGCCATTAGAAACATGTTAGCTACCGATGTTGCTGT
AGGGAGTGCATTAGTTGACATGTATGCTAAATGTGGTTGCTTGAACTTTG
CGAGAAGAAA
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