CK939521

Overview
NameCK939521
Unique NameCK939521
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK70_ARATH (Probable WRKY transcription factor 70 OS=Arabidopsis thaliana GN=WRKY70 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 4.249e-36
Identity = 88/197 (44.67%), Postives = 110/197 (55.84%), Query Frame = 3
Query:   93 SEKTSREKMAKELVKGKKFAHQLQVLLQKPFEEDGLVSAEDLVVKILGSFXXXXXXXXXXXXXXCDDDHEKYQQQQANSCNVNSDDYRRRSEDSGESKKRPAAKDSVSKRGCYKRKKNSQTWTVVSSTSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTCRDIISFPQ 683
            + K  + K+  +LV+G     QLQ LL +P    GL   EDLV KIL  F                      +  Q  SC     D   + EDSG+S+KR        KRGCYKRKK S+T T+ S+   D  +WRKYGQKEILN K PRSYFRCTHKY QGC+ATKQVQ+ + +P+M+  TYIG+HTC      P+
Sbjct:    3 TNKAKKLKVMNQLVEGHDLTTQLQQLLSQP--GSGL---EDLVAKILVCFNNTISVLDTFEPISSSSSLAAVEGSQNASC-----DNDGKFEDSGDSRKRLGPVKG--KRGCYKRKKRSETCTIESTILEDAFSWRKYGQKEILNAKFPRSYFRCTHKYTQGCKATKQVQKVELEPKMFSITYIGNHTCNTNAETPK 187          
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK54_ARATH (Probable WRKY transcription factor 54 OS=Arabidopsis thaliana GN=WRKY54 PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.862e-32
Identity = 84/204 (41.18%), Postives = 109/204 (53.43%), Query Frame = 3
Query:   99 KTSREKMAKELVKGKKFAHQLQVLL------QKPFEEDGLVSA-----------EDLVVKILGSFXXXXXXXXXXXXXXCDDDHEKYQQQQANSCNVNSDDYRRRSEDSGESKKRPAAKDSVSKRGCYKRKKNSQTWTVVSSTSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTC 659
            K+ + K+  +LV+G +FA QLQ+LL      Q   +E  LVS            ++L+ KILGSF                          A+  + ++        DSGESKK+        KRGCY RK  S    V + +S D +AWRKYGQKEILNT  PRSY RCTHK  QGC+ATKQVQ++D D +M+  TYIG+HTC
Sbjct:    9 KSIKRKVVDQLVEGYEFATQLQLLLSHQHSNQYHIDETRLVSGSGSVSGGPDPVDELMSKILGSFHKTISVLDSFDPVAVSVPIAVEGSWNASCGDDSATPVSCNGGDSGESKKKRLGVGK-GKRGCYTRKTRSHARIVEAKSSEDRYAWRKYGQKEILNTTFPRSYLRCTHKPTQGCKATKQVQKQDQDSEMFQITYIGYHTC 211          
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK46_ARATH (Probable WRKY transcription factor 46 OS=Arabidopsis thaliana GN=WRKY46 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.861e-21
Identity = 49/116 (42.24%), Postives = 71/116 (61.21%), Query Frame = 3
Query:  327 SCNVNSDDYRRRSEDSGESKKRPAAKDSVSKRGCYKRKKNSQTWTVVSSTSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTCRDIIS 674
            S N + +  +R  E  G+  K    K  VS++   K K    T    + + +DGH WRKYGQKEI  +K+PR+Y+RCTH++ Q C A KQVQ+ D DP +++  Y+G+HTC +I S
Sbjct:   54 SFNQDKNILKRSLEIDGKDSKNVFKKRKVSEKNTEKVKVFVAT-EQENGSIDDGHCWRKYGQKEIHGSKNPRAYYRCTHRFTQDCLAVKQVQKSDTDPSLFEVKYLGNHTCNNITS 168          
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK67_ARATH (Probable WRKY transcription factor 67 OS=Arabidopsis thaliana GN=WRKY67 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.816e-18
Identity = 68/209 (32.54%), Postives = 98/209 (46.89%), Query Frame = 3
Query:  114 KMAKELVKGKKFAHQLQVLLQKPFEEDGLVSAEDLVVKILGSFXXXXXXXXXXXXXXCDDDHEKYQQQQANSCNVNSDDYRRRSEDSGESKKRPAAKDSVSKRGCYKRKKNSQTWTVVSSTSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTCR-----------DIISFPQIVAESSEP 707
            K  + L++G+  A+ L++LL+    E   VS E L+  IL SF                 +H  Y +  ++S N+ S   RR S+     +K   A+      G      +S+T        NDG  WRKYGQK I  + H R Y+RCT+   Q C ATK+VQ+  D+P +Y TTY+G H C+            +I F Q+V E   P
Sbjct:    8 KAMEALLRGQGCANNLKILLENG--EISSVSTEPLIHTILDSFSLALSFMD-------SPNHPPYHE--SSSHNMASHMSRRSSKQVQHRRKLCVAE------GLVNYNHDSRTMC-----PNDGFTWRKYGQKTIKASAHKRCYYRCTYAKDQNCNATKRVQKIKDNPPVYRTTYLGKHVCKAFAVHDDTYSSTMIRFDQVVPEPIMP 194          
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK62_ARATH (Probable WRKY transcription factor 62 OS=Arabidopsis thaliana GN=WRKY62 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.285e-16
Identity = 56/185 (30.27%), Postives = 89/185 (48.11%), Query Frame = 3
Query:  108 REKMAKELVKGKKFAHQLQVLLQKPFEEDGLVSAEDLVVKILGSFXXXXXXXXXXXXXXCDDDHEKYQQQQANSCNVNSDDYRRRSEDSGESKKRPAAKDSVSKRGCYKRKKNSQTWTVVSSTSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTCR 662
            ++K  ++L+ G   A+QL ++ Q   E D  +  EDL   +L  F                 D   +Q  Q+N  N +  D     E S +   +   K S+++   Y R ++S      +   +DG  WRKYGQK+I  +++ RSY++C +   Q C A KQVQ+   +P +Y TTY G H C+
Sbjct:    5 QQKAMEKLLHGHGCANQLLIMDQT--ESDSSMEREDLAKSVLHCFSDALSILI---------DTNDHQDDQSN--NSSPQDSSPVLESSRKPLHKRGRKTSMAESSDYHRHESS------TPIYHDGFLWRKYGQKQIKESEYQRSYYKCAYTKDQNCEAKKQVQKIQHNPPLYSTTYFGQHICQ 170          
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK53_ARATH (Probable WRKY transcription factor 53 OS=Arabidopsis thaliana GN=WRKY53 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.193e-16
Identity = 45/123 (36.59%), Postives = 63/123 (51.22%), Query Frame = 3
Query:  333 NVNSDDYRRRSEDSGESKKRPAAKDSVSKRGCYKRKKNSQTWTV---------VSSTSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTCRDIIS 674
            ++N         D G S +    +D +      K++K    W+          +    +D  +WRKYGQK+IL  K PRSY+RCTH+  Q C ATKQVQR D D  +++ TY G HTC   I+
Sbjct:  103 SINGSPRSEEFADGGGSSESHHRQDYIFNS---KKRKMLPKWSEKVRISPERGLEGPQDDVFSWRKYGQKDILGAKFPRSYYRCTHRSTQNCWATKQVQRSDGDATVFEVTYRGTHTCSQAIT 222          
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK41_ARATH (Probable WRKY transcription factor 41 OS=Arabidopsis thaliana GN=WRKY41 PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 2.864e-16
Identity = 42/93 (45.16%), Postives = 54/93 (58.06%), Query Frame = 3
Query:  432 KRKKNSQTWTV---------VSSTSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTCRDIISFPQ 683
            K++K    WT          +    +D  +WRKYGQK+IL  K PRSY+RCT +  Q C ATKQVQR D DP +++ TY G HTC   I  P+
Sbjct:  116 KKRKMLPKWTEQVRISPERGLEGPHDDIFSWRKYGQKDILGAKFPRSYYRCTFRNTQYCWATKQVQRSDGDPTIFEVTYRGTHTCSQGIPLPE 208          
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK55_ARATH (WRKY transcription factor 55 OS=Arabidopsis thaliana GN=WRKY55 PE=2 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 6.379e-16
Identity = 35/60 (58.33%), Postives = 44/60 (73.33%), Query Frame = 3
Query:  480 NDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTC 659
            +D H WRKYGQKEIL ++ PR+Y+RCTH+ +  C A KQVQR +DDP  +  TY G HTC
Sbjct:  173 DDNHTWRKYGQKEILGSRFPRAYYRCTHQKLYNCPAKKQVQRLNDDPFTFRVTYRGSHTC 232          
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK38_ARATH (Probable WRKY transcription factor 38 OS=Arabidopsis thaliana GN=WRKY38 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.332e-16
Identity = 57/204 (27.94%), Postives = 86/204 (42.16%), Query Frame = 3
Query:  111 EKMAKELVKGKKFAHQLQVLLQKPFEEDGLVSAEDLVVKILGSFXXXXXXXXXXXXXXCDDDHEKYQQQQANSCNVNSDDYRRRSEDSGESKKR---PAAKDSVSKRGCYKRKKNSQTWTVVSSTS--NDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTCRDIISFPQIVAESSEP 707
            EK  + +  G   A +L+  L  P  + G +S+ DL   I+ SF                          +N+ ++ S       +   +   R   P  + S SK+       +S+ W   S      DG+ WRKYGQK I  + H RSY+RC++     C A K  Q+  D+P +Y TTY GHHTC+   +   I     +P
Sbjct:    8 EKAVQAIRYGHSCAMRLKRRLNHPMADGGPLSSYDLAKSIVESF--------------------------SNAISILSAKPETEDDQFSDLSSRDSSPPPQGSPSKKRKIDSTNSSENWRDDSPDPIYYDGYLWRKYGQKSIKKSNHQRSYYRCSYNKDHNCEARKHEQKIKDNPPVYRTTYFGHHTCKTEHNLDAIFIAGQDP 185          
BLAST of CK939521 vs. ExPASy Swiss-Prot
Match: WRK30_ARATH (Probable WRKY transcription factor 30 OS=Arabidopsis thaliana GN=WRKY30 PE=2 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 8.332e-16
Identity = 42/100 (42.00%), Postives = 57/100 (57.00%), Query Frame = 3
Query:  363 SEDSGESKKRPAA-KDSVSKRGCYKRKKNSQTWTVVSSTSNDGHAWRKYGQKEILNTKHPRSYFRCTHKYVQGCRATKQVQRRDDDPQMYDTTYIGHHTC 659
            S  S +S + P   K S      +  K        V  T +DG +WRKYGQK+IL  K PR Y+RCT++  QGC ATKQVQR D++  + + +Y G H+C
Sbjct:   73 SPKSDDSDQEPLVIKSSKKSMPRWSSKVRIAPGAGVDRTLDDGFSWRKYGQKDILGAKFPRGYYRCTYRKSQGCEATKQVQRSDENQMLLEISYRGIHSC 172          
The following BLAST results are available for this feature:
BLAST of CK939521 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
WRK70_ARATH4.249e-3644.67Probable WRKY transcription factor 70 OS=Arabidops... [more]
WRK54_ARATH4.862e-3241.18Probable WRKY transcription factor 54 OS=Arabidops... [more]
WRK46_ARATH3.861e-2142.24Probable WRKY transcription factor 46 OS=Arabidops... [more]
WRK67_ARATH6.816e-1832.54Probable WRKY transcription factor 67 OS=Arabidops... [more]
WRK62_ARATH1.285e-1630.27Probable WRKY transcription factor 62 OS=Arabidops... [more]
WRK53_ARATH2.193e-1636.59Probable WRKY transcription factor 53 OS=Arabidops... [more]
WRK41_ARATH2.864e-1645.16Probable WRKY transcription factor 41 OS=Arabidops... [more]
WRK55_ARATH6.379e-1658.33WRKY transcription factor 55 OS=Arabidopsis thalia... [more]
WRK38_ARATH8.332e-1627.94Probable WRKY transcription factor 38 OS=Arabidops... [more]
WRK30_ARATH8.332e-1642.00Probable WRKY transcription factor 30 OS=Arabidops... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004749_D08 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IF_D08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939521 ID=CK939521; Name=CK939521; organism=Citrus sinensis; type=EST; length=800bp
GGGGCACAAAANNNCCAAAAGAGAAACTGTTAAAAAAGATAATAAAAAAA
AATAAAAAATAAAGGTGAGGTAGCAAGATGGGCACTCTTTGTTCAGAGAA
AACATCTAGGGAAAAGATGGCGAAGGAGCTTGTGAAGGGTAAGAAATTTG
CCCACCAGCTTCAGGTTCTCCTTCAAAAGCCCTTTGAAGAAGATGGGTTG
GTTTCGGCTGAGGATCTTGTTGTGAAGATCTTGGGATCTTTCACTCAGAC
TCTTTCTGTGCTCGGTACTACTGTTACTACTTCTTGTGATGATGATCATG
AGAAGTATCAGCAGCAGCAGGCGAATTCTTGTAATGTTAATTCCGATGAC
TATCGCCGGAGATCGGAAGATTCCGGGGAGAGTAAGAAGAGGCCGGCGGC
GAAGGACAGTGTCAGTAAGAGAGGATGCTACAAGAGAAAGAAAAATTCGC
AAACATGGACAGTAGTTTCTTCAACCAGTAATGATGGTCATGCATGGAGA
AAATATGGCCAAAAGGAGATCCTCAATACTAAACATCCAAGGAGCTACTT
CAGGTGTACGCATAAGTATGTGCAGGGCTGCCGGGCAACGAAACAAGTTC
AAAGAAGAGACGATGATCCACAAATGTATGATACAACATACATAGGCCAT
CATACCTGCAGAGATATCATCAGCTTCCCACAAATTGTGGCTGAAAGTTC
TGAGCCTAATTGGGGTAGTACTATTAGCACTGGTGGTTCTTTTGTAGTGA
GTTCCTCGTCTAGCATCCCGACAGAAGAAATCAAACAAGAATGCAAGGAA
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