CK939505
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: PMP22_ARATH (Peroxisomal membrane protein PMP22 OS=Arabidopsis thaliana GN=PMP22 PE=1 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 3.084e-65 Identity = 123/181 (67.96%), Postives = 139/181 (76.80%), Query Frame = 1 Query: 181 KKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRARSMALPKAK 723 K LQ+YL QLQQHPLRTKAITAGVLS +SD+V+QKL+GI V+F +LGP GHF H LDK FKGKKDT TVAKKV+LEQLT SP N+L+FMIYYGVV+E PW V+ +IKK YPTVQ T+WTF+PVVGWIN+ YVPL FRVI HSLVA WGIFL LRARSM L AK Sbjct: 8 KTTLQRYLSQLQQHPLRTKAITAGVLSGVSDVVSQKLSGIQKIQLRRVLLKVIFAGGFLGPAGHFFHTYLDKFFKGKKDTQTVAKKVILEQLTLSPLNHLLFMIYYGVVIERTPWTLVRERIKKTYPTVQLTAWTFFPVVGWINYKYVPLHFRVILHSLVAFFWGIFLTLRARSMTLALAK 188
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: PX24C_DICDI (PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.356e-20 Identity = 59/169 (34.91%), Postives = 97/169 (57.40%), Query Frame = 1 Query: 199 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGV--VVEGRPWRDVKTKIKKD-YPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRA 696 Y+ +L+ P++TKA+T+ LS IS +VAQK ++G P H+ H+ILD++FK KD K++++QL +P+ N+ F Y V +++G+P + + K+ D +PT++ SW WP+ IN +VP RV+F +LV CWGI+L++ A Sbjct: 17 YMKKLKSKPIQTKALTSATLSFISSVVAQKFIEKKKINWNAVVKFTVWGLIS-SPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAF---YSVLAILDGKP-KSILFKLYFDLFPTLK-ASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILA 179
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: PXMP2_MOUSE (Peroxisomal membrane protein 2 OS=Mus musculus GN=Pxmp2 PE=2 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 4.084e-17 Identity = 52/185 (28.11%), Postives = 99/185 (53.51%), Query Frame = 1 Query: 145 RRNFSEEMGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKL-----TGIXXXXXXXXXXXVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 684 R E+GS+ K+ L QYL+ L+ +P+ TKA+++G+LSA+ +++AQ + +++G GP H+L+L ++ + ++V K+++L++L +P L+F ++EG+ K++ + +W W + +IN YVPLQFRV+F ++ A+ W +L Sbjct: 7 RLRVESELGSLPKRALAQYLLLLKLYPVLTKAVSSGILSALGNLLAQTIEKKQRKDSRLLEVSGLLRYLVYGLFVTGPLSHYLYLFMEYSVPPEVPWASV-KRLLLDRLFFAPTFLLLFFFVMN-LLEGKNVSVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: PXMP2_BOVIN (Peroxisomal membrane protein 2 OS=Bos taurus GN=PXMP2 PE=2 SV=3) HSP 1 Score: 86.6557 bits (213), Expect = 1.552e-16 Identity = 52/181 (28.73%), Postives = 98/181 (54.14%), Query Frame = 1 Query: 166 MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLTGIXXXXXXXXXXXV-------LFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSP-WNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 684 +G + ++ L QYL L+ +P+ TKA T+G+LSA+ + +AQ + V ++G + GP GHF +L++++ + + + K+++L++L +P + +L F++ +EG+ K+K + +W W V +IN Y+P+QFRV+F +LVA+ W +L Sbjct: 14 LGPLPRRALSQYLRLLRLYPVLTKAATSGILSALGNFLAQLIEKKQKKENCSQKLDVSGPLRYAIYGFFFTGPLGHFFYLLMERWIPSEVPLAGI-KRLLLDRLLFAPAFLSLFFLVMN--FLEGQDTAAFAAKMKSGFWPALRMNWRVWTPVQFININYIPVQFRVLFANLVALFWYAYL 191
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: PX24D_DICDI (PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.314e-15 Identity = 54/172 (31.40%), Postives = 82/172 (47.67%), Query Frame = 1 Query: 181 KKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKLT----GIXXXXXXXXXXXVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 684 K YL QL ++P+ TKA+T+G L ISD + Q + +FG A GP H+ LDK F KK K+ ++Q+ SP N +F G++ EG+ D+ K+KKD+ T + WP + ++N Y+ RV F ++ + WG FL Sbjct: 9 KLAQSHYLSQLHKYPVATKAVTSGFLYLISDSLVQGIELSRDKDKKYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFP-KKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGIL-EGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYISSIHRVTFMNVCNIGWGAFL 178
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: PXMP2_RAT (Peroxisomal membrane protein 2 OS=Rattus norvegicus GN=Pxmp2 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.716e-15 Identity = 51/185 (27.57%), Postives = 97/185 (52.43%), Query Frame = 1 Query: 145 RRNFSEEMGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQKL-----TGIXXXXXXXXXXXVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 684 R E+ S+ K+ L QYL+ L+ +P+ TKA+++G+LSA+ +++AQ + +++G GP H+L+L ++ + + V K+++L++L +P L+F ++EG+ K++ + +W W + +IN YVPLQFRV+F ++ A+ W +L Sbjct: 7 RLRVESELRSLPKRALAQYLLFLKFYPVVTKAVSSGILSALGNLLAQMIEKKQKKDSRSLEVSGLLRYLVYGLFVTGPLSHYLYLFMEYWVPPEVPWARV-KRLLLDRLFFAPTFLLLFFFVMN-LLEGKNISVFVAKMRSGFWPALQMNWRMWTPLQFININYVPLQFRVLFANMAALFWYAYL 189
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: PXMP2_HUMAN (Peroxisomal membrane protein 2 OS=Homo sapiens GN=PXMP2 PE=1 SV=3) HSP 1 Score: 77.7962 bits (190), Expect = 7.209e-14 Identity = 46/179 (25.70%), Postives = 92/179 (51.40%), Query Frame = 1 Query: 166 MGSIAKKGLQQYLIQLQQHPLRTKAITAGVLSAISDIVAQ------KLTGIXXXXXXXXXXXVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFL 684 +G++ ++ L QYL+ L+ +P+ TKA T+G+LSA+ + +AQ K ++G + GP HF + ++ + + + ++++L++L +P ++F + +EG+ K++ + +W W + +IN YVPL+FRV+F +L A+ W +L Sbjct: 14 LGALPRRALAQYLLFLRLYPVLTKAATSGILSALGNFLAQMIEKKRKKENSRSLDVGGPLRYAVYGFFFTGPLSHFFYFFMEHWIPPEVPLAGL-RRLLLDRLVFAPAFLMLFFLIMN-FLEGKDASAFAAKMRGGFWPALRMNWRVWTPLQFININYVPLKFRVLFANLAALFWYAYL 190
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: MPV17_RAT (Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.209e-14 Identity = 49/172 (28.49%), Postives = 82/172 (47.67%), Query Frame = 1 Query: 199 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIXXXXXXXXXXXVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRARSM 705 Y L HP + + +TAG L + DI++Q+L G+ GC ++GP + +LD + G + + KK++L+Q +P F+ GV+ G +D K+K+DYP T++ WP V N VPL +R+ VA+ W +L+ +A + Sbjct: 7 YQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVGPVVGGWYRVLDHLIPGTTKVNAL-KKMLLDQGGFAPCFLGCFLPLVGVL-NGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKAHQL 176
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: MPV17_MOUSE (Protein Mpv17 OS=Mus musculus GN=Mpv17 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.606e-13 Identity = 48/169 (28.40%), Postives = 81/169 (47.93%), Query Frame = 1 Query: 199 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIXXXXXXXXXXXVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRA 696 Y L HP + + +TAG L + D+++Q+L G+ V GC ++GP + +LD + G + KK++L+Q +P F+ G++ G +D K+K+DYP T++ WP V N VPL +R+ VA+ W +L+ +A Sbjct: 7 YQRALAAHPWKVQVLTAGSLMGVGDMISQQLVERRGLQQHQAGRTLTMVSLGCGFVGPVVGGWYKVLDHLIPGTTKVHAL-KKMLLDQGGFAPCFLGCFLPLVGIL-NGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAIVWNSYLSWKA 173
BLAST of CK939505 vs. ExPASy Swiss-Prot
Match: MPV17_HUMAN (Protein Mpv17 OS=Homo sapiens GN=MPV17 PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.578e-13 Identity = 48/172 (27.91%), Postives = 81/172 (47.09%), Query Frame = 1 Query: 199 YLIQLQQHPLRTKAITAGVLSAISDIVAQKLT---GIXXXXXXXXXXXVLFGCAYLGPFGHFLHLILDKIFKGKKDTSTVAKKVVLEQLTSSPWNNLMFMIYYGVVVEGRPWRDVKTKIKKDYPTVQYTSWTFWPVVGWINHLYVPLQFRVIFHSLVAMCWGIFLNLRARSM 705 Y L HP + + +TAG L + DI++Q+L G+ V GC ++GP + +LD+ G + KK++L+Q +P F+ G + G +D K+++DYP T++ WP V N VPL +R+ VA+ W +L+ +A + Sbjct: 7 YQRALAAHPWKVQVLTAGSLMGLGDIISQQLVERRGLQEHQRGRTLTMVSLGCGFVGPVVGGWYKVLDRFIPGTTKVDAL-KKMLLDQGGFAPCFLGCFLPLVGAL-NGLSAQDNWAKLQRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKAHRL 176 The following BLAST results are available for this feature:
BLAST of CK939505 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939505 ID=CK939505; Name=CK939505; organism=Citrus sinensis; type=EST; length=759bpback to top |