CN188224 | Citrus Genome Database

Overview


Name	CN188224
Unique Name	CN188224
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	698

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Pulp cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9095	contig	Csv1_Contig9095:60..760.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_RICCO (Enolase OS=Ricinus communis PE=2 SV=1)

HSP 1 Score: 297.745 bits (761), Expect = 3.810e-80
Identity = 147/155 (94.84%), Postives = 152/155 (98.06%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F S+YPIVSIEDPFDQDDWEHY+KLTSE+GEKVQIVGDDLLVTNPKRVEKAI+EK CNALLLKVNQIGSVTESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFR PVEPY
Sbjct:  291 FASEYPIVSIEDPFDQDDWEHYSKLTSEIGEKVQIVGDDLLVTNPKRVEKAIQEKACNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRTPVEPY 445

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO2_HEVBR (Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1)

HSP 1 Score: 295.049 bits (754), Expect = 2.470e-79
Identity = 145/155 (93.55%), Postives = 151/155 (97.42%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F+++YPIVSIEDPFDQDDWEHYAKLTSE+G KVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGA FR PVEPY
Sbjct:  291 FVTEYPIVSIEDPFDQDDWEHYAKLTSEIGVKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGANFRTPVEPY 445

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO1_HEVBR (Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 5.502e-79
Identity = 144/155 (92.90%), Postives = 151/155 (97.42%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F+++YPIVSIEDPFDQDDW HYAKLTSE+GEKVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  291 FVAEYPIVSIEDPFDQDDWAHYAKLTSEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRKPVEPY 445

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_ORYSJ (Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.019e-77
Identity = 140/155 (90.32%), Postives = 151/155 (97.42%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F+S+YPIVSIEDPFDQDDWEHYAK+T+E+GE+VQIVGDDLLVTNP RV KAI+EK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGLATGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  292 FVSEYPIVSIEDPFDQDDWEHYAKMTAEIGEQVQIVGDDLLVTNPTRVAKAIQEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_ALNGL (Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.943e-77
Identity = 142/155 (91.61%), Postives = 150/155 (96.77%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F+ +YPIVSIEDPFDQDDWEHY+KLT+E+GEKVQIVGDDLLVTNPKRVEKAIKEK CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMA HRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  287 FVDEYPIVSIEDPFDQDDWEHYSKLTAEIGEKVQIVGDDLLVTNPKRVEKAIKEKACNALLLKVNQIGSVTESIEAVKMSKRAGWGVMA-HRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGANFRTPVEPY 440

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO2_MAIZE (Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1)

HSP 1 Score: 284.648 bits (727), Expect = 3.338e-76
Identity = 139/155 (89.68%), Postives = 149/155 (96.13%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F+S+YPIVSIEDPFDQDDW HYAK+T E+GE+VQIVGDDLLVTNP RV KAIKEK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELGA AVYAGAKFRAPVEPY
Sbjct:  292 FVSEYPIVSIEDPFDQDDWVHYAKMTEEIGEQVQIVGDDLLVTNPTRVAKAIKEKSCNALLLKVNQIGSVTESIEAVKMSKRAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGAIAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_SOLLC (Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 284.263 bits (726), Expect = 4.360e-76
Identity = 139/155 (89.68%), Postives = 149/155 (96.13%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F+S+YPIVSIEDPFDQDDWE YAKLT+E+GE+VQIVGDDLLVTNPKRV KAI EKTCNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EAVYAGA FR PVEPY
Sbjct:  290 FVSEYPIVSIEDPFDQDDWETYAKLTAEIGEQVQIVGDDLLVTNPKRVAKAIAEKTCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAVYAGASFRKPVEPY 444

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_MESCR (Enolase OS=Mesembryanthemum crystallinum GN=PGH1 PE=2 SV=1)

HSP 1 Score: 282.722 bits (722), Expect = 1.268e-75
Identity = 138/155 (89.03%), Postives = 148/155 (95.48%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F+++YPIVSIEDPFDQDDWEHYAK+T+E GEKVQIVGDDLLVTNPKRV+KAI E  CNALLLKVNQIGSVTESIEAV+MSK+AGWGVMASHRSGETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG +AVYAGA FR PVEPY
Sbjct:  290 FVAEYPIVSIEDPFDQDDWEHYAKMTAECGEKVQIVGDDLLVTNPKRVKKAIDENPCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDKAVYAGANFRRPVEPY 444

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO1_MAIZE (Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.657e-75
Identity = 140/155 (90.32%), Postives = 146/155 (94.19%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F+S+YPI SIEDPFDQDDW  YAKLT E+G+KVQIVGDDLLVTNP RV KAI EKTCNALLLKVNQIGSVTESIEAVRMSK+AGWGVMASHRSGETEDTFIADLSVGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG  AVYAGAKFRAPVEPY
Sbjct:  292 FVSEYPIESIEDPFDQDDWSTYAKLTDEIGQKVQIVGDDLLVTNPTRVAKAINEKTCNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRSGETEDTFIADLSVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGDAAVYAGAKFRAPVEPY 446

[Close]

BLAST of CN188224 vs. ExPASy Swiss-Prot
Match: ENO_ARATH (Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.832e-74
Identity = 134/155 (86.45%), Postives = 147/155 (94.84%), Query Frame = -2

Query:  233 FISDYPIVSIEDPFDQDDWEHYAKLTSEVGEKVQIVGDDLLVTNPKRVEKAIKEKTCNALLLKVNQIGSVTESIEAVRMSKQAGWGVMASHRSGETEDTFIADLSVGLATGQIKTGAPCRSERLAKYNQLLRIEEELGAEAVYAGAKFRAPVEPY 697
            F+++YPIVSIEDPFDQDDWEHYAK+T+E G +VQIVGDDLLVTNPKRV KAI EK+CNALLLKVNQIGSVTESIEAV+MSK+AGWGVM SHRSGETEDTFIADL+VGL+TGQIKTGAPCRSERLAKYNQLLRIEEELG+EA+YAG  FR PVEPY
Sbjct:  290 FVAEYPIVSIEDPFDQDDWEHYAKMTTECGTEVQIVGDDLLVTNPKRVAKAIAEKSCNALLLKVNQIGSVTESIEAVKMSKKAGWGVMTSHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQLLRIEEELGSEAIYAGVNFRKPVEPY 444

The following BLAST results are available for this feature:

BLAST of CN188224 vs. ExPASy Swiss-Prot

BLAST of CN188224 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
ENO_RICCO	3.810e-80	94.84	Enolase OS=Ricinus communis PE=2 SV=1	[more]
ENO2_HEVBR	2.470e-79	93.55	Enolase 2 OS=Hevea brasiliensis GN=ENO2 PE=1 SV=1	[more]
ENO1_HEVBR	5.502e-79	92.90	Enolase 1 OS=Hevea brasiliensis GN=ENO1 PE=1 SV=1	[more]
ENO_ORYSJ	3.019e-77	90.32	Enolase OS=Oryza sativa subsp. japonica GN=ENO1 PE...	[more]
ENO_ALNGL	3.943e-77	91.61	Enolase OS=Alnus glutinosa GN=PGH1 PE=2 SV=1	[more]
ENO2_MAIZE	3.338e-76	89.68	Enolase 2 OS=Zea mays GN=ENO2 PE=2 SV=1	[more]
ENO_SOLLC	4.360e-76	89.68	Enolase OS=Solanum lycopersicum GN=PGH1 PE=2 SV=1	[more]
ENO_MESCR	1.268e-75	89.03	Enolase OS=Mesembryanthemum crystallinum GN=PGH1 P...	[more]
ENO1_MAIZE	1.657e-75	90.32	Enolase 1 OS=Zea mays GN=ENO1 PE=2 SV=1	[more]
ENO_ARATH	1.832e-74	86.45	Enolase OS=Arabidopsis thaliana GN=ENO PE=1 SV=1	[more]

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Properties


Property Name	Value
Genbank description	UCRCS05_0005L03_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005L03, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN188224 ID=CN188224; Name=CN188224; organism=Citrus sinensis; type=EST; length=698bp
TTTTTTTTTTTTTTTCCCGCAACTAGATACTCATTTTAATAAAACATGCT
CTAGGAAATGGTTCCTCATACAGCAAGGTTCAAGCTCTCAGACAAAAACT
GTGTCAAAATTATTGAGGAAATATCTTGGGTCACAAAATGCTAAAAACCC
ATAAAAATCCATTTTACATAACTTATTGAAGTACTCCATTGCTCAAATCC
AGCACCACACCAGATCAGCATCTCAAACTCTAGTAGGGTTCAACAGGGGC
ACGGAACTTGGCACCAGCATAAACTGCTTCAGCACCGAGCTCTTCTTCAA
TTCTCAGAAGCTGATTATACTTTGCAAGGCGCTCTGACCTGCATGGTGCT
CCTGTCTTAATTTGACCCGTGGCCAAGCCCACTGAGAGATCGGCAATGAA
AGTATCTTCAGTCTCACCACTGCGGTGGCTGGCCATCACACCCCACCCAG
CTTGCTTGGACATTCTGACGGCTTCAATGCTCTCAGTTACAGATCCAATT
TGATTAACCTTGAGAAGGAGGGCGTTGCAGGTCTTCTCTTTGATAGCCTT
CTCAACCCTCTTAGGATTGGTGACCAAAAGATCATCTCCAACAATTTGTA
CTTTTTCTCCGACCTCACTGGTTAGCTTGGCATAGTGCTCCCAGTCGTCT
TGGTCAAATGGATCTTCAATTGATACAATAGGATAATCAGAGATGAAT