CN188207

Overview
NameCN188207
Unique NameCN188207
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 329.717 bits (844), Expect = 9.124e-90
Identity = 156/226 (69.03%), Postives = 182/226 (80.53%), Query Frame = 3
Query:   27 MMNTRAIFCLTFS-FLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            MM T A++ LT + F +SGAH A ITFTNNC  TIWPG LT+D   QL   GF LASKA  TL V +PWKGRFWART+C+ +S GKFTC TADC +GQV CNGNGA PPASLVE  IAA++G DF+D+SLVDG+NLP+SVA +GG+G  C  +SC+ANVNAVCP+EL VKGSD +V+ACKSAC AFN+PQYCCTGAF+   TCP TKYS+IFK QCPQAYSYAYDD
Sbjct:    1 MMKTLALYGLTLALFFLSGAHSAKITFTNNCPRTIWPGTLTSDQKPQLPNTGFVLASKASLTLGVQAPWKGRFWARTRCTTNS-GKFTCETADCSTGQVACNGNGAIPPASLVEINIAANRGMDFYDVSLVDGYNLPVSVATRGGTG-DCKATSCRANVNAVCPAELQVKGSDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDD 224          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.247e-88
Identity = 151/217 (69.59%), Postives = 175/217 (80.65%), Query Frame = 3
Query:   54 LTFSFLI-SGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            LT + L  SGAH A ITFTNNC NT+WPG LT D   QLS  GFELASKA +++D PSPW GRFW RT+CS D++GKFTC TADCGSGQV CNG GA PPA+LVE TIAA+ GQD++D+SLVDGFNLP+SVAPQGG+G  C  SSC ANVN VCP+ L VK +DG+VI+CKSAC AF + +YCCT   N PETCPPT+YS+IF+ QCPQAYSYAYDD
Sbjct:   12 LTLAILFFSGAHAAKITFTNNCPNTVWPGTLTGDQKPQLSLTGFELASKASRSVDAPSPWSGRFWGRTRCSTDAAGKFTCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNKVCPAPLQVKAADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDD 227          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 325.094 bits (832), Expect = 2.247e-88
Identity = 152/230 (66.09%), Postives = 181/230 (78.70%), Query Frame = 3
Query:   12 KASAFMMNTRAIFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            K+ A ++    +  L FS    GAH A ITFTN C  T+WPG LT D   QLS  GFELA+   +++D PSPW GRF+ RT+CS D+SGKFTCATADCGSGQV+CNGNGAAPPA+LVE TIA++ GQDF+D+SLVDGFNLP+SVAPQGG+G  C  S+C A++N VCP+ L VKGSDG+VIACKSAC AFN+P+YCCT   +KPETCPP  YSK+FK QCPQAYSYAYDD
Sbjct:    3 KSQAALLGLTTLAILFFS----GAHAAKITFTNKCSYTVWPGTLTGDQKPQLSLTGFELATGISRSVDAPSPWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNGAAPPATLVEITIASNGGQDFYDVSLVDGFNLPMSVAPQGGTG-KCKASTCPADINKVCPAPLQVKGSDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDD 227          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 4.686e-86
Identity = 144/226 (63.72%), Postives = 174/226 (76.99%), Query Frame = 3
Query:   30 MNTRAIFCLTFSFLI--SGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            M   A+  L   FL   +G + A  TFTN C NT+WPG LT  GG QL   GFELAS A  +L V +PW GRFW R+ CS DSSGKF C+T DCGSGQ++CNG GA+PPASLVE T+A + GQDF+D+SLVDGFNLP+ +AP+GGSG  C ++SC AN+N VCP+EL+ KGSDG+VI CKSAC A N+PQYCCTGA+  P+TCPPT +SK+FK+QCPQAYSYAYDD
Sbjct:    1 MKFEALIGLVLVFLSEHAGVYSAKFTFTNKCPNTVWPGTLTGGGGPQLLSTGFELASGASTSLTVQAPWSGRFWGRSHCSIDSSGKFKCSTGDCGSGQISCNGAGASPPASLVELTLATNGGQDFYDVSLVDGFNLPIKLAPRGGSG-DCNSTSCAANINTVCPAELSDKGSDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDD 225          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 1.508e-84
Identity = 151/228 (66.23%), Postives = 168/228 (73.68%), Query Frame = 3
Query:   27 MMNTRAIFCLTFSFLI---SGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            MM T  +  L+ S  I    GAH ATI+F NNC   +WPG LT+D   QLS  GFELAS+A   LD P PW GRFWART CS D+SGKF CATADC SGQV CNGNGA PPA+L EF I A  GQDF+D+SLVDGFNLP+SV PQGG+G  C T+SC ANVNAVCPSEL  KGSDG+V+AC SAC  F  PQYCCT   N PETCPPT YS+IF + CP AYSYAYDD
Sbjct:    1 MMKTLVVV-LSLSLTILSFGGAHAATISFKNNCPYMVWPGTLTSDQKPQLSTTGFELASQASFQLDTPVPWNGRFWARTGCSTDASGKFVCATADCASGQVMCNGNGAIPPATLAEFNIPAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-DCKTASCPANVNAVCPSELQKKGSDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDD 226          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 293.123 bits (749), Expect = 9.464e-79
Identity = 132/194 (68.04%), Postives = 158/194 (81.44%), Query Frame = 3
Query:  120 NTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            NT+WPG LT D   QLS   FELASKA +++D PSPW GRFW RT+CS D++GKF+C TADCGSGQV CNG GA PPA+LVE TIAA+ GQD++D+SLVDGFNLP+SVAPQGG+G  C  SSC ANVN  CP++L VK +DG+VI+CKSAC AF + +YCCT   + PETCPPT+YS+IF+ QCPQAYSYAYDD
Sbjct:    1 NTVWPGTLTGDQKPQLSLTAFELASKASQSVDAPSPWSGRFWGRTRCSTDAAGKFSCETADCGSGQVACNGAGAVPPATLVEITIAANGGQDYYDVSLVDGFNLPMSVAPQGGTG-ECKPSSCPANVNMACPAQLQVKAADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDD 193          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TLP2_PRUPE (Thaumatin-like protein 2 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 290.426 bits (742), Expect = 6.135e-78
Identity = 139/226 (61.50%), Postives = 160/226 (70.80%), Query Frame = 3
Query:   27 MMNTRAIFCLTFSFL-ISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            M    A+  L+ + L   GAH AT++F NNC  T+WP +    G  QLS  GFELAS+A   LD P PW GRFWART+CS D+SGKF C TADC SGQ+ CNG    PPA+L EFTIAA  GQDF+D+SLVDGFNLP+SV PQGG+G TC   SC ANVN VCPSEL   GSDG+V+AC SAC  F EPQYCCT      E CPPT YS+IF +QCP AYSYA+DD
Sbjct:    2 MKTLGAVLSLSLTLLSFGGAHAATMSFKNNCPYTVWPASF---GNPQLSTTGFELASQASFQLDTPVPWSGRFWARTRCSTDASGKFVCETADCDSGQLMCNGKTGIPPATLAEFTIAAGGGQDFYDVSLVDGFNLPMSVTPQGGTG-TCKMGSCAANVNLVCPSELQKIGSDGSVVACLSACVKFGEPQYCCTPPQETKEKCPPTNYSQIFHEQCPDAYSYAFDD 223          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.373e-61
Identity = 117/227 (51.54%), Postives = 145/227 (63.88%), Query Frame = 3
Query:   27 MMNTRAIFCLTFSFLISGAHLATITFT--NNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            M N  +I  L   F+ SG  +    FT  NNC  T+W G L A  G +L + GFEL   A + L  P+ W GRFWART C+ D+SG   C T DCG   + CNG G  PP +L EFT+  D G+DF+D+SLVDG+N+ L + P GGSG  C  + C +++NA CP  L V   + NV+ACKSAC  FN  QYCC GA +KPETCPPT YS+IFK+ CP AYSYAYDD
Sbjct:    1 MANISSIHILFLVFITSGIAVMATDFTLRNNCPTTVWAGTL-AGQGPKLGDGGFELTPGASRQLTAPAGWSGRFWARTGCNFDASGNGRCVTGDCGG--LRCNGGGV-PPVTLAEFTLVGDGGKDFYDVSLVDGYNVKLGIRPSGGSG-DCKYAGCVSDLNAACPDMLKVMDQN-NVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDD 221          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 227.254 bits (578), Expect = 6.378e-59
Identity = 107/220 (48.64%), Postives = 145/220 (65.91%), Query Frame = 3
Query:   45 IFCLTFSFLISGAHLATITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAADKGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGN-VIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            +F   F  L+S A  +T+ F N C++ +WPG   + G   L+  GF+L +    +L +P  W GRFW R  C+ D SG+  CAT DCG G ++CNG G  PPA+L E T+  +   DF+D+SLVDG+NL +S+ P  GSG  C+ + C +++N +CP  L V+  +G  V+ACKSAC+AFN PQYCCTG F  P++C PT YSKIFK  CP+AYSYAYDD
Sbjct:    6 LFLFAFLLLLSHASASTVIFYNKCKHPVWPGIQPSAGQNLLAGGGFKLPANKAHSLQLPPLWSGRFWGRHGCTFDRSGRGHCATGDCG-GSLSCNGAGGEPPATLAEITLGPEL--DFYDVSLVDGYNLAMSIMPVKGSGQ-CSYAGCVSDLNQMCPVGLQVRSRNGKRVVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDD 221          
BLAST of CN188207 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.090e-50
Identity = 95/203 (46.80%), Postives = 123/203 (60.59%), Query Frame = 3
Query:   96 ITFTNNCQNTIWPGALTADGGAQLSENGFELASKAKKTLDVPSPWKGRFWARTQCSRDSSGKFTCATADCGSGQVTCNGNGAAPPASLVEFTIAAD-KGQDFFDLSLVDGFNLPLSVAPQGGSGATCTTSSCKANVNAVCPSELAVKGSDGNVIACKSACAAFNEPQYCCTGAFNKPETCPPTKYSKIFKDQCPQAYSYAYDD 701
            +   NNC  ++WPG L   G       GF L +  +  L+VP+ W GR W R  CS DS G+ +CAT DCG G + CNG   A PA++VE T+        F+D+SLVDGFN P+S+A  GG G  C T++C A+VN  CPS L V+  +G V  C+SAC A    +YCCTG +  P  C PT +S +FK  CP+AYSYAYDD
Sbjct:   31 LIMVNNCGESVWPGLLGTAGHPTPQSGGFHLGAGEEAALEVPAGWSGRVWPRRGCSFDSRGRGSCATGDCG-GVLRCNGAAGATPATVVEMTLGTSASAMHFYDVSLVDGFNAPVSMAAVGG-GVGCGTAACGADVNVCCPSALEVRDREGRVAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDD 231          
The following BLAST results are available for this feature:
BLAST of CN188207 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
TLP1_CASSA9.124e-9069.03Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TP1A_MALDO2.247e-8869.59Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLP1_PRUPE2.247e-8866.09Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_PYRPY4.686e-8663.72Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
TLP_PRUAV1.508e-8466.23Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TP1B_MALDO9.464e-7968.04Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP2_PRUPE6.135e-7861.50Thaumatin-like protein 2 OS=Prunus persica PE=2 SV... [more]
PR5_ARATH1.373e-6151.54Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLPH_ARATH6.378e-5948.64Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TLPH_ORYSJ1.090e-5046.80Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005K17_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005K17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188207 ID=CN188207; Name=CN188207; organism=Citrus sinensis; type=EST; length=702bp
GACCATCAAGCAAAGCCTCAGCTTTCATGATGAATACCCGAGCAATATTT
TGCCTTACCTTCTCCTTCCTCATCTCTGGGGCGCACTTGGCAACGATTAC
GTTCACAAACAACTGCCAAAACACTATTTGGCCGGGAGCCCTAACCGCAG
ATGGAGGTGCTCAGCTGTCAGAAAATGGGTTCGAGTTAGCATCCAAAGCA
AAAAAGACTCTCGATGTTCCTTCCCCTTGGAAAGGCCGTTTCTGGGCTCG
AACACAGTGCTCTAGAGATTCCTCCGGCAAGTTCACTTGCGCCACTGCAG
ATTGTGGCTCAGGCCAAGTCACATGCAACGGTAATGGTGCAGCCCCACCG
GCATCTCTCGTGGAATTCACAATTGCTGCAGACAAAGGACAAGATTTCTT
CGATCTTAGCCTCGTTGATGGCTTTAACTTGCCTCTTTCAGTTGCCCCAC
AAGGCGGTTCTGGTGCTACTTGCACGACATCTAGCTGTAAAGCCAACGTG
AATGCTGTTTGTCCATCAGAGCTAGCAGTCAAAGGATCCGATGGGAATGT
TATTGCTTGCAAGAGTGCATGTGCAGCTTTTAATGAACCACAATATTGTT
GCACTGGGGCATTCAATAAACCTGAGACTTGCCCACCGACTAAATATTCT
AAGATTTTCAAAGACCAGTGCCCTCAAGCTTATAGCTATGCTTATGATGA
TC
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