CK939450
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: SMT3_ARATH (Ubiquitin-like protein SMT3 OS=Arabidopsis thaliana GN=SMT3 PE=1 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 1.246e-40 Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 3 Query: 102 QEEDKKPNDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 368 QEEDKKP D AHINLKVK QDGNEVFFRIKRSTQLKKLMNAYCDRQSV++NSIAFL DGRRLR EQTPDEL+MEDGDEIDAMLHQTGG Sbjct: 5 QEEDKKPGDGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNSIAFLFDGRRLRAEQTPDELDMEDGDEIDAMLHQTGG 93
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: SMT3_ORYSJ (Ubiquitin-like protein SMT3 OS=Oryza sativa subsp. japonica GN=SMT3 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.167e-38 Identity = 80/93 (86.02%), Postives = 83/93 (89.25%), Query Frame = 3 Query: 105 EEDKKP---NDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGML 374 EEDKKP AHINLKVK QDGNEVFFRIKRSTQLKKLMNAYCDRQSV++N+IAFL DGRRLRGEQTPDELEMEDGDEIDAMLHQTGG L Sbjct: 6 EEDKKPAGGEGGGAHINLKVKGQDGNEVFFRIKRSTQLKKLMNAYCDRQSVDMNAIAFLFDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGCL 98
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: PMT3_SCHPO (Ubiquitin-like protein pmt3/smt3 OS=Schizosaccharomyces pombe GN=pmt3 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.084e-23 Identity = 51/93 (54.84%), Postives = 68/93 (73.12%), Query Frame = 3 Query: 90 TNTPQEEDKKPNDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 368 T ++D KP+ + HINLKV QD NEVFF+IK++T+ KLM YC RQ +NS+ FL+DG R+R +QTP EL+MEDGD+I+A+L Q GG Sbjct: 21 TGDTSQQDVKPSTE--HINLKVVGQDNNEVFFKIKKTTEFSKLMKIYCARQGKSMNSLRFLVDGERIRPDQTPAELDMEDGDQIEAVLEQLGG 111
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: SUMO3_XENTR (Small ubiquitin-related modifier 3 OS=Xenopus tropicalis GN=sumo3 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.901e-18 Identity = 48/91 (52.75%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 99 PQEEDKKPNDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 371 P+E K ND HINLKV QDG+ V F+IKR T L KLM AYCDRQ + + I F DG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: SUMO3_XENLA (Small ubiquitin-related modifier 3 OS=Xenopus laevis GN=sumo3 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.901e-18 Identity = 48/91 (52.75%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 99 PQEEDKKPNDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 371 P+E K ND HINLKV QDG+ V F+IKR T L KLM AYCDRQ + + I F DG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCDRQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: SUMO3_CHICK (Small ubiquitin-related modifier 3 OS=Gallus gallus GN=SUMO3 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 8.691e-18 Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 99 PQEEDKKPNDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 371 P+E K ND HINLKV QDG+ V F+IKR T L KLM AYC+RQ + + I F DG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINEADTPAQLEMEDEDTIDVFQQQTGGL 93
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: SUMO3_HUMAN (Small ubiquitin-related modifier 3 OS=Homo sapiens GN=SUMO3 PE=1 SV=2) HSP 1 Score: 89.7373 bits (221), Expect = 1.135e-17 Identity = 47/91 (51.65%), Postives = 57/91 (62.64%), Query Frame = 3 Query: 99 PQEEDKKPNDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGGM 371 P+E K ND HINLKV QDG+ V F+IKR T L KLM AYC+RQ + + I F DG+ + TP +LEMED D ID QTGG+ Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGGV 93
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: SUMO3_RAT (Small ubiquitin-related modifier 3 OS=Rattus norvegicus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.483e-17 Identity = 47/90 (52.22%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 99 PQEEDKKPNDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 368 P+E K ND HINLKV QDG+ V F+IKR T L KLM AYC+RQ + + I F DG+ + TP +LEMED D ID QTGG Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: SUMO3_MOUSE (Small ubiquitin-related modifier 3 OS=Mus musculus GN=Sumo3 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.483e-17 Identity = 47/90 (52.22%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 99 PQEEDKKPNDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 368 P+E K ND HINLKV QDG+ V F+IKR T L KLM AYC+RQ + + I F DG+ + TP +LEMED D ID QTGG Sbjct: 6 PKEGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSMRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92
BLAST of CK939450 vs. ExPASy Swiss-Prot
Match: SUMO3_DANRE (Small ubiquitin-related modifier 3 OS=Danio rerio GN=sumo3 PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 1.483e-17 Identity = 47/90 (52.22%), Postives = 56/90 (62.22%), Query Frame = 3 Query: 99 PQEEDKKPNDQSAHINLKVKDQDGNEVFFRIKRSTQLKKLMNAYCDRQSVELNSIAFLLDGRRLRGEQTPDELEMEDGDEIDAMLHQTGG 368 P+E K ND HINLKV QDG+ V F+IKR T L KLM AYC+RQ + + I F DG+ + TP +LEMED D ID QTGG Sbjct: 6 PREGVKTEND---HINLKVAGQDGSVVQFKIKRHTPLSKLMKAYCERQGLSIRQIRFRFDGQPINETDTPAQLEMEDEDTIDVFQQQTGG 92 The following BLAST results are available for this feature:
BLAST of CK939450 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939450 ID=CK939450; Name=CK939450; organism=Citrus sinensis; type=EST; length=592bpback to top |