CK939433

Overview
NameCK939433
Unique NameCK939433
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length804
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA1_RAT (Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus norvegicus GN=P4ha1 PE=2 SV=2)

HSP 1 Score: 113.235 bits (282), Expect = 1.697e-24
Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 1
Query:  157 IVNPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            I+ P+K +    KPR   +   ++D E + + +LAK +L R+ V D  +G+   +  R S   ++   +D +++ I  +I   T L     E++QV  Y  G +YEPH+D+      D    +  G+R+AT L Y+SDV+ GG TVFP                       G +V P++G A+ +++L  +   D  + H+ CPV+ G KW + KW+H
Sbjct:  322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLSRATVHDPETGKLTTAQYRVSKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518          
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA1_MOUSE (Prolyl 4-hydroxylase subunit alpha-1 OS=Mus musculus GN=P4ha1 PE=2 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.895e-24
Identity = 64/218 (29.36%), Postives = 112/218 (51.38%), Query Frame = 1
Query:  157 IVNPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            I+ P+K +    KPR   +   ++D E + + +LAK +L+R+ +++ ++G  +    R S   ++   +D +++ I  +I   T L     E++QV  Y  G +YEPH+D+      D    +  G+R+AT L Y+SDV+ GG TVFP                       G +V P++G A+ +++L  +   D  + H+ CPV+ G KW + KW+H
Sbjct:  322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPVTGALETVHYRISKSAWLSGYEDPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFRELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518          
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA1_PONAB (Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abelii GN=P4HA1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.781e-24
Identity = 63/218 (28.90%), Postives = 113/218 (51.83%), Query Frame = 1
Query:  157 IVNPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            I+ P+K +    KPR   +   ++D E + + +LAK +L+R+ +++ ++G+ +    R S   ++   ++ +++ I  +I   T L     E++QV  Y  G +YEPH+D+      D    +  G+R+AT L Y+SDV+ GG TVFP                       G +V P++G A+ +++L  +   D  + H+ CPV+ G KW + KW+H
Sbjct:  322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518          
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA1_HUMAN (Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapiens GN=P4HA1 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.781e-24
Identity = 63/218 (28.90%), Postives = 113/218 (51.83%), Query Frame = 1
Query:  157 IVNPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            I+ P+K +    KPR   +   ++D E + + +LAK +L+R+ +++ ++G+ +    R S   ++   ++ +++ I  +I   T L     E++QV  Y  G +YEPH+D+      D    +  G+R+AT L Y+SDV+ GG TVFP                       G +V P++G A+ +++L  +   D  + H+ CPV+ G KW + KW+H
Sbjct:  322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEIVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518          
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA1_BOVIN (Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus GN=P4HA1 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.449e-24
Identity = 63/218 (28.90%), Postives = 112/218 (51.38%), Query Frame = 1
Query:  157 IVNPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            I+ P+K +    KPR   +   ++D E + + +LAK +L+R+ +++ ++G+ +    R S   ++   ++ +++ I  +I   T L     E++QV  Y  G +YEPH+D+      D    +  G+R+AT L Y+SDV  GG TVFP                       G +V P++G A+ +++L  +   D  + H+ CPV+ G KW + KW+H
Sbjct:  322 ILAPAKQEDEWDKPRIIRFHDIISDAEIEVVKDLAKPRLRRATISNPITGDLETVHYRISKSAWLSGYENPVVSRINMRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFARKDEPDAFKELGTGNRIATWLFYMSDVLAGGATVFPEV---------------------GASVWPKKGTAVFWYNLFASGEGDYSTRHAACPVLVGNKWVSNKWLH 518          
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA2_CAEEL (Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabditis elegans GN=phy-2 PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.180e-23
Identity = 64/215 (29.77%), Postives = 108/215 (50.23%), Query Frame = 1
Query:  166 PSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            P KV+ + + P A +++  + D E + +  LA  +LKR+ V ++ +GE + +  R S   ++    D +I  +  +I  +T L +   E++QV  Y  G  Y+PH+D+      +    +  G+R+ATVL Y+S   +GG TVF +                      G AV P + DAL +++L  +   D  + H+ CPV+ G KW + KWIH
Sbjct:  315 PIKVEILRFDPLAVLFKNVIHDSEIEVIKELASPKLKRATVQNSKTGELEHATYRISKSAWLKGDLDPVIDRVNRRIEDFTNLNQATSEELQVANYGLGGHYDPHFDFARKEEKNAFKTLNTGNRIATVLFYMSQPERGGATVFNHL---------------------GTAVFPSKNDALFWYNLRRDGEGDLRTRHAACPVLLGVKWVSNKWIH 508          
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA1_CHICK (Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gallus GN=P4HA1 PE=1 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 7.130e-23
Identity = 65/218 (29.82%), Postives = 107/218 (49.08%), Query Frame = 1
Query:  157 IVNPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDY----FSDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            I+ P K +    KPR   +   ++D E + +  LAK +L R+ V D  +G+   +  R S   ++   +  +++ I  +I   T L     E++QV  Y  G +YEPH+D+      D    +  G+R+AT L Y+SDV+ GG TVFP                       G +V P++G A+ +++L  +   D  + H+ CPV+ G KW + KW+H
Sbjct:  304 ILGPVKQEDEWDKPRIVRFLDIISDEEIETVKELAKPRLSRATVHDPETGKLTTAHYRVSKSAWLSGYESPVVSRINTRIQDLTGLDVSTAEELQVANYGVGGQYEPHFDFGRKDEPDAFKELGTGNRIATWLFYMSDVSAGGATVFPEV---------------------GASVWPKKGTAVFWYNLFPSGEGDYSTRHAACPVLVGNKWVSNKWLH 500          
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA1_CAEEL (Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabditis elegans GN=dpy-18 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.074e-22
Identity = 61/215 (28.37%), Postives = 107/215 (49.77%), Query Frame = 1
Query:  166 PSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            P KV+   + P A +++  ++D E   +  LAK +L R+ V D+++G+   +  R S   ++ + +  ++  +  +I   T L  E  E++Q+  Y  G  Y+PH+D+     S     +  G+R+ATVL Y+S  + GG TVF  A+                       + P + DAL +++L+     +P + H+ CPV+ G KW + KWIH
Sbjct:  318 PIKVEIKRFNPLAVLFKDVISDDEVAAIQELAKPKLARATVHDSVTGKLVTATYRISKSAWLKEWEGDVVETVNKRIGYMTNLEMETAEELQIANYGIGGHYDPHFDHAKKEESKSFESLGTGNRIATVLFYMSQPSHGGGTVFTEAKS---------------------TILPTKNDALFWYNLYKQGDGNPDTRHAACPVLVGIKWVSNKWIH 511          
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA2_CHICK (Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gallus GN=P4HA2 PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.621e-22
Identity = 63/216 (29.17%), Postives = 106/216 (49.07%), Query Frame = 1
Query:  157 IVNPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYFSDKVN--IVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            ++ P K +     P    Y   ++D E + +  LAK +L R+ V D  +G   ++  R S  +++ +  D ++A +  ++   T L  +  E +QV  Y  G +YEPH+D+     +  +   G+RLAT L Y+SDV  GG TVFP+                      G A+ P++G A+ +++L  +   D  + H+ CPV+ G KW + KW H
Sbjct:  324 LIAPFKEEDEWDSPHIVRYYDVMSDEEIEKIKQLAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVAKVNQRMQQITGLTVKTAELLQVANYGMGGQYEPHFDFSRRPFDSTLKSEGNRLATFLNYMSDVEAGGATVFPDF---------------------GAAIWPKKGTAVFWYNLFRSGEGDYRTRHAACPVLVGCKWVSNKWFH 518          
BLAST of CK939433 vs. ExPASy Swiss-Prot
Match: P4HA2_MOUSE (Prolyl 4-hydroxylase subunit alpha-2 OS=Mus musculus GN=P4ha2 PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.756e-21
Identity = 62/218 (28.44%), Postives = 106/218 (48.62%), Query Frame = 1
Query:  157 IVNPSKVKQISWKPRAFVYEGFLTDLECDHLINLAKSQLKRSAVADNLSGESKLSDVRTSSGTFIPKGKDAIIAGIEDKIATWTFLPKENGEDIQVLRYEHGQKYEPHYDYF----SDKVNIVRGGHRLATVLMYLSDVAKGGETVFPNAEEPPRRRTPATNDDLSECAKKGIAVKPRRGDALLFFSLHTNAIPDPVSLHSGCPVIEGEKWSATKWIH 798
            ++ P K +     P    Y   ++D E + +  +AK +L R+ V D  +G   ++  R S  +++ +  D ++A +  ++   T L  +  E +QV  Y  G +YEPH+D+      D    +  G+R+AT L Y+SDV  GG TVFP+                      G A+ P++G A+ +++L  +   D  + H+ CPV+ G KW + KW H
Sbjct:  325 LIAPFKEEDEWDSPHIVRYYDVMSDEEIERIKEIAKPKLARATVRDPKTGVLTVASYRVSKSSWLEEDDDPVVARVNRRMQHITGLTVKTAELLQVANYGMGGQYEPHFDFSRSDDEDAFKRLGTGNRVATFLNYMSDVEAGGATVFPDL---------------------GAAIWPKKGTAVFWYNLLRSGEGDYRTRHAACPVLVGCKWVSNKWFH 521          
The following BLAST results are available for this feature:
BLAST of CK939433 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 18
Match NameE-valueIdentityDescription
P4HA1_RAT1.697e-2430.28Prolyl 4-hydroxylase subunit alpha-1 OS=Rattus nor... [more]
P4HA1_MOUSE2.895e-2429.36Prolyl 4-hydroxylase subunit alpha-1 OS=Mus muscul... [more]
P4HA1_PONAB3.781e-2428.90Prolyl 4-hydroxylase subunit alpha-1 OS=Pongo abel... [more]
P4HA1_HUMAN3.781e-2428.90Prolyl 4-hydroxylase subunit alpha-1 OS=Homo sapie... [more]
P4HA1_BOVIN6.449e-2428.90Prolyl 4-hydroxylase subunit alpha-1 OS=Bos taurus... [more]
P4HA2_CAEEL4.180e-2329.77Prolyl 4-hydroxylase subunit alpha-2 OS=Caenorhabd... [more]
P4HA1_CHICK7.130e-2329.82Prolyl 4-hydroxylase subunit alpha-1 OS=Gallus gal... [more]
P4HA1_CAEEL2.074e-2228.37Prolyl 4-hydroxylase subunit alpha-1 OS=Caenorhabd... [more]
P4HA2_CHICK4.621e-2229.17Prolyl 4-hydroxylase subunit alpha-2 OS=Gallus gal... [more]
P4HA2_MOUSE1.756e-2128.44Prolyl 4-hydroxylase subunit alpha-2 OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004750_F11 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650001_IIF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939433 ID=CK939433; Name=CK939433; organism=Citrus sinensis; type=EST; length=804bp
GGGGGGAGTTTAACATTTTGCCGGAAAATCTCAAATCCCTCTTGTCTCTC
ATAATCGATCCAATCCACGCTCATGTCTCCCACAAGGCTCTTTCTAAATT
TCTTCTTCCTGCTCTCGTTCTCGTTGTTAATTCGCAAATCTTTCAGCTCT
ACTGCCATTGTCAACCCATCTAAAGTCAAACAAATTTCTTGGAAACCCAG
GGCCTTTGTGTACGAGGGTTTTCTCACAGACTTAGAATGCGATCACTTGA
TTAATCTTGCAAAATCTCAGCTGAAGAGATCAGCAGTTGCTGATAATTTG
AGTGGAGAGAGCAAGCTGAGCGATGTTCGAACAAGTTCTGGGACCTTTAT
ACCTAAAGGAAAGGATGCTATTATTGCTGGTATAGAGGACAAGATTGCAA
CATGGACGTTTCTTCCAAAAGAAAATGGGGAAGACATACAAGTACTAAGG
TATGAGCACGGACAGAAATACGAACCACATTATGACTACTTCTCTGACAA
GGTTAATATTGTTCGGGGCGGACACCGCCTAGCAACTGTGCTAATGTATC
TTTCCGATGTTGCTAAAGGTGGTGAGACAGTATTTCCCAATGCTGAGGAA
CCTCCACGTCGCAGAACTCCTGCTACCAATGACGATCTTTCTGAATGTGC
TAAGAAAGGAATTGCAGTGAAGCCACGAAGAGGGGATGCTCTTCTTTTCT
TCAGTCTCCACACGAACGCTATTCCAGACCCAGTAAGTCTCCATAGTGGT
TGTCCGGTCATCGAAGGAGAGAAATGGTCAGCAACAAAGTGGATTCATGT
CGAC
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