CK939425
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CK939425 vs. ExPASy Swiss-Prot
Match: SNAK1_SOLTU (Snakin-1 OS=Solanum tuberosum GN=SN1 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 5.213e-33 Identity = 59/88 (67.05%), Postives = 71/88 (80.68%), Query Frame = 1 Query: 61 MKLHFTTVVVCSLILSFSLLEPAMAGSPFCDSKCAERCKLAGVQDRCLKYCGMCCEDCKCVPSGTYGNKHEYPCYRDKVNKKGKPKCP 324 MKL T+++ +L+++ SL++ MAGS FCDSKC RC AG+ DRCLKYCG+CCE+CKCVPSGTYGNKHE PCYRDK N KGK KCP Sbjct: 1 MKLFLLTLLLVTLVITPSLIQTTMAGSSFCDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGNKHECPCYRDKKNSKGKSKCP 88
BLAST of CK939425 vs. ExPASy Swiss-Prot
Match: GAST1_SOLLC (Protein GAST1 OS=Solanum lycopersicum GN=GAST1 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.513e-13 Identity = 28/59 (47.46%), Postives = 34/59 (57.63%), Query Frame = 1 Query: 148 CDSKCAERCKLAGVQDRCLKYCGMCCEDCKCVPSGTYGNKHEYPCYRDKVNKKGKPKCP 324 C KC RC + C+ +C CC C CVP+GTYGNK PCY + K+G PKCP Sbjct: 54 CQPKCTYRCSKTSYKKPCMFFCQKCCAKCLCVPAGTYGNKQSCPCYNNWKTKRGGPKCP 112
BLAST of CK939425 vs. ExPASy Swiss-Prot
Match: RSI1_SOLLC (Protein RSI-1 OS=Solanum lycopersicum GN=RSI-1 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 3.884e-12 Identity = 26/59 (44.07%), Postives = 33/59 (55.93%), Query Frame = 1 Query: 148 CDSKCAERCKLAGVQDRCLKYCGMCCEDCKCVPSGTYGNKHEYPCYRDKVNKKGKPKCP 324 C +C RC + C+ +C CC C CVP G YGNK PCY + ++GKPKCP Sbjct: 38 CKPRCTYRCSATSHKKPCMFFCQKCCATCLCVPKGVYGNKQSCPCYNNWKTQEGKPKCP 96
BLAST of CK939425 vs. ExPASy Swiss-Prot
Match: GASA4_ARATH (Gibberellin-regulated protein 4 OS=Arabidopsis thaliana GN=GASA4 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 2.517e-11 Identity = 26/59 (44.07%), Postives = 32/59 (54.24%), Query Frame = 1 Query: 148 CDSKCAERCKLAGVQDRCLKYCGMCCEDCKCVPSGTYGNKHEYPCYRDKVNKKGKPKCP 324 C S+C RCK C+ +C CC C CVP G YGNK CY + ++G PKCP Sbjct: 48 CPSECDRRCKKTQYHKACITFCNKCCRKCLCVPPGYYGNKQVCSCYNNWKTQEGGPKCP 106 The following BLAST results are available for this feature:
BLAST of CK939425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939425 ID=CK939425; Name=CK939425; organism=Citrus sinensis; type=EST; length=509bpback to top |